Basic Information

Insect: Cerastis rubricosa
Gene Symbol: clz9
Assembly: GCA_949152445.1
Location: OX424523.1:4159762-4162251[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.8e-10 3.6e-07 31.1 0.0 3 36 27 61 26 67 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.8e-10	3.6e-07	31.1	0.0	3	36	27	61	26	67	0.91

Sequence Information

Coding Sequence: ATGGTGCGGACCTACCAACGAAAGTTTACAAATTCACGCAACGGTAAGAATCATTCACCTTACCTAAGTTATTGCAAAGAAGATTTGCAAAATGCAATAGAAGAAATTCAAAATGGCTCACTTAAATTAATAGAGGCGGCTAATAAATACAACATACCAAAGAGTACTTTAAGCAGAAAATGTCGAAATATAAATTGCACACAAGAAAAAGCCGGACATCCTACTCTTTTTTCAAAAGATGAAGAGATGGCGTTcataaaatacatacaaatattgaGTAATTGGGGGTTTCCACTAGATTCTACAGATTTACGCGTATTTGCCCAAAAATACTTGAACAAACTAGGAAAAACCGTCTACAGTTTAAAAGACAATATGCCTGGAGTAGATTGGGCGCGAAATTTCATGATTAGACATAAAGCTGAAATTTCCAACCGAAATGCATCAAATATCACAAGTGACCGCGCCAAAGTTTCACCTGCTATAATAGACGATTTTTTTTCCCATTATGAAAATACTATTGAAGGTGTCTCTCCTGATTGTATCATTAATTATGATGAGACTAATCTCACTGATGACCCGGGccataagaaatatttatttaagagaGGTTGCAAATATCCTGAAAGGGTAATCAACACTACAAAAACATCTATTTCTTTAATGTTTACCGGCACTGCTGATGGACAGTTATTGCCAACATACGTTGTATATAAGGCAGATCATTTATGGGATCAATGGCTAGAAGGAGGGCCTGAGGGGACGAGGTACAACCGATCGAAAAGTGGTTGGTTCGACTCTACGTGCTTCGAGGACTGGTTTAATACTGTCATAGTACCATATGCAAGAACAAAACCTGGCCAAAAAGTGATAATTGGGGACAATTTATCTTCACATTTTTCAGAATCCGTATTACAAACTTGTCAGGAGCTTAATATTATGTTCGTTTGCTTACCTCCTAAAACCACTCATTTACTCCAACCGTTAGATGTTGCATTTTACGcgcctttaaaaaaatactggcgTGAAGTATTGACACACTGGAAGAGAACAgaaggacttaaacataaaactTTAGTAAAAAGTTCATTTCCTATGTTATTGTATAGATTGCAGAATAAATTAAGAGAAAAGGGTTCAGAATCCAACAATCTAATTGCCGGGTTTAACAAATGCGGCTTATATCCCGTTAATTCACAACGACCAAAATCTCGATTGCCCCACACAAATTCTATTTCGGAGGAAATACAAGACACGGCATCTTCAGCTgtaatagaaatattaaaagaatTAAGAAATCCAACCGCGGCTCTTGAACAGCCTAAGCGAAAAAAGAAGTGTAATGTTCCACCCGGGaaaagcattactgcagatgatTTATTACAAATGGAAAAACCGTCAAGGATCAAATCTCgtcaaggtaaaataaaaactataaatagatgttcaaaaataaatagaacaaTTTCAAACGACAGAGATAGAAGTAATATCGATTATAACAACAGAGAATCACACATGCAGCCCATTGCAGGACCTTCAGGGCAATGTAAACGAACGACACTTCGTAAAGAAAATAGGGGAAATGAATCTGACTCCACCTATATTAGTTCAGAAGATGAATATCCAACTGAGAATAAAAATAAGCCTCAAAAACCAATGTCAAGTTTTAAAGGAAAAGGCAAaggcaaaaaaagtaaaattcagGCTCCTGCCGTTGCAAAATCCAGAAGGAAAATAACTACAAGAAAGCTTAGCATTTCAACCACAAGTGTTTCGGATACAAGGAGTGTGCATAGTGACTCGGACCTACTAGATGTTGATTTCGATGACCACAGCTCAGATATTAATAATAGGAATGATCGTTCACCGTTTATAATTCCGAAAACAGACAATAGTGACAAAATAGAATATCAAAATAAGATTACTGATGAAGAAATAGATGAAAAAGTCAAAACAAAAAGTTGCGTATCAcatgatacaataaaatatgggATGAGTCATCAGCACAGTGAAATGAAAACTTTACCATCAATGGCCGAGATACGGAATGATTATGAAAACGAAAAGAAGGATAAACCCAGAAGTGAAGTGAACGAAAAAGCTCAAAGAATACTCTGTGATAATCAATATAATGAAGTACCTCTTATTTTCTTTGATGAGTTTGGGAGTGAAGAAATTGTAGTTGAAGATGTTAATAATactaaagaaattataaatGACAAAGAATGTAGTGAAGTTATGGATAATGATGAAAATGCggatttaattgaaaataaagaaaaccacTTCGAGAACAGGAAAAAACTGACTATTATTAAGGAAGAAAGTTTACAAAATgcgttcaaaaacaaaaaagtagtcTTTAAGGACCTTAAACCTGTATGTCTAAGCAGTTACATTGATATACCAAAGAAAAATAAGCAAAAGTCAAAGAATTATTATAACGATAGACAAGAAattttaaaagcattgatgGATAGTGACTAA
Protein Sequence: MVRTYQRKFTNSRNGKNHSPYLSYCKEDLQNAIEEIQNGSLKLIEAANKYNIPKSTLSRKCRNINCTQEKAGHPTLFSKDEEMAFIKYIQILSNWGFPLDSTDLRVFAQKYLNKLGKTVYSLKDNMPGVDWARNFMIRHKAEISNRNASNITSDRAKVSPAIIDDFFSHYENTIEGVSPDCIINYDETNLTDDPGHKKYLFKRGCKYPERVINTTKTSISLMFTGTADGQLLPTYVVYKADHLWDQWLEGGPEGTRYNRSKSGWFDSTCFEDWFNTVIVPYARTKPGQKVIIGDNLSSHFSESVLQTCQELNIMFVCLPPKTTHLLQPLDVAFYAPLKKYWREVLTHWKRTEGLKHKTLVKSSFPMLLYRLQNKLREKGSESNNLIAGFNKCGLYPVNSQRPKSRLPHTNSISEEIQDTASSAVIEILKELRNPTAALEQPKRKKKCNVPPGKSITADDLLQMEKPSRIKSRQGKIKTINRCSKINRTISNDRDRSNIDYNNRESHMQPIAGPSGQCKRTTLRKENRGNESDSTYISSEDEYPTENKNKPQKPMSSFKGKGKGKKSKIQAPAVAKSRRKITTRKLSISTTSVSDTRSVHSDSDLLDVDFDDHSSDINNRNDRSPFIIPKTDNSDKIEYQNKITDEEIDEKVKTKSCVSHDTIKYGMSHQHSEMKTLPSMAEIRNDYENEKKDKPRSEVNEKAQRILCDNQYNEVPLIFFDEFGSEEIVVEDVNNTKEIINDKECSEVMDNDENADLIENKENHFENRKKLTIIKEESLQNAFKNKKVVFKDLKPVCLSSYIDIPKKNKQKSKNYYNDRQEILKALMDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00185247;
90% Identity: iTF_00017280;
80% Identity: -