Cleu034164.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- -
- Assembly
- GCA_963082945.1
- Location
- OY720382.1:16729302-16755466[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0014 62 5.0 0.1 18 37 98 117 83 131 0.75 2 3 1.3e-05 0.57 11.6 0.2 18 49 180 213 176 216 0.86 3 3 1.6e-06 0.071 14.5 0.2 18 49 259 292 255 296 0.86
Sequence Information
- Coding Sequence
- ATGGAGTCATCTGGCGCAGAGGAAACTCATATCCGGAAGAAAACTTCCAAAGACAGTAATAAAACATGCAAAACTCGTGCTAAAGaggattttgatgaaatcgAGACAGACAAGGAGTCATCTAGCGGAGAAGACACTATTATCCGGAAAAAAGTTTCCAAAGACGAGAATAAAACACGCAAAACTCATTTCCAGGAGGATTTTGATGACATCAAGAACGAGGACGATTTCATACACCCAAAACTCAACCATCCAAATACTGAGCCTTCTCCAGTTTGGAAGTATTTTCTCAGGAGTAAAGACAAACTCCGGGCGAAATGTAGAATTTGTCACAAAGTGATAAAATGTACCAGCGGCTCCACTACAGGGTTACTGAGACATCTACCGACACATTCAAAtgatgaaaaaagaaaacataaggTTGAAGTTCATTTTGTCAATGTAGAAAACAAGAAGGACGGAGAAaaagAGACGGGCTTTGCAGACGTGTCAAAAATTTGCAGAAATAATGGTTCCACAGTCTGGCAAGCATTTCTCAGAAGCAAAGACAAACAGTTTGCGAAATGTAAATTATGTCTCAGAGTGTTCAAATTCAATGGTACTTCGTCATTACGACGTCACTTGAAAGCAAAACACCATATACGAGAAGAAACCGAAAATGTCGTGTATTTTGTTGAGGCTGAGAACGAAAGTACCGAAAGTGAAGAGACGGTCTTTGCAGACGTGTCAAAAATTTACAGAAATAATGGTTCCACAGTCTGGCAAGCATTTCTCAGAAGCGAAGACAAACAGTTAGCGAAATGTAAATTGTGTCGCAAAGTGTTAAAACTCAAAGGTACTTCGTCATTACGACGTCACTTGGAAGCAAAACACCACATACGAGAAGAAATCGAAAATATAGTGTATTTTGTTGAGGCTAAGAATGAAAGTACCGTAAATGAAGCAGAAACGGAGTCATCTAGCGGTAAGGAAACTATTATCCAGAAAAAAGCTTCCAACGACAGGAAAAAAACATGCAAAACTCATGCCCAGGAAGATTTTGATGAAATCGAGActtcTGAGCCGCTAATGTTTATGATGTCGAAGAAAGGCAACGTGATGCTAACTTACCGAGGTTACACATACCATCTCAAGTACACAAGAAATATGAAGAAAACCTGGAGATGTTCACAACATTGCTCATTCCGCTGTCGAGCAACTTTGACCACTATAGAAAATAGAGTTTaTTATTCTGCTATCTACGAAGATGGCAGATTTCTGTCTTTCAGGGGATACAAGTTCACACGACATAAAGTAAAGGGCCACAAGATACGATGGCAATGTTCTAGGCAGAGACATGCTCGGTGCAGCGCAGCGGTATATACTGTTGAAGAAGTTATTGCTGTTTCCTTGAATGCAAAGGTCGACAATTTCTCTGCTATCAAGGTTACAAGTTTACCCGGCACAGAGTACGAGCAGCTCACACAAGGTGGCAGTATTCTAACCAAAGTAGAGGAGGTTGTTGCGCTGCAGTGTATACGAACAAAGAAGGTGGACCAATGTTCACAATGTCTGCCCGAGGAGGGCGAATTCTGTGTTTGTCAGGTCATCGATTCGGTCAGCAGTACTCAAAGAACGTCAAAACAAGATGGCAGTGTACAAGTGTCAATAAAGGATGCAGAGCTAACGTCTTCACGCTGTGCAGTGTACGCGAAATCTAAAAGGGGGGCCCGTATCCTCATACTAGATGGTTACCCTTTCTACCACCATCGCAACACGGGGCTGAAGGCACGATGGTTCTGTGCCACCCATCATAACAAGGGCTGCAAAGCTGTTATCTTTACTGCTTGCGGTGAAATCATCAAAGCAAATAATATTCATTATCACACGGCAACCGACGACGTGTAG
- Protein Sequence
- MESSGAEETHIRKKTSKDSNKTCKTRAKEDFDEIETDKESSSGEDTIIRKKVSKDENKTRKTHFQEDFDDIKNEDDFIHPKLNHPNTEPSPVWKYFLRSKDKLRAKCRICHKVIKCTSGSTTGLLRHLPTHSNDEKRKHKVEVHFVNVENKKDGEKETGFADVSKICRNNGSTVWQAFLRSKDKQFAKCKLCLRVFKFNGTSSLRRHLKAKHHIREETENVVYFVEAENESTESEETVFADVSKIYRNNGSTVWQAFLRSEDKQLAKCKLCRKVLKLKGTSSLRRHLEAKHHIREEIENIVYFVEAKNESTVNEAETESSSGKETIIQKKASNDRKKTCKTHAQEDFDEIETSEPLMFMMSKKGNVMLTYRGYTYHLKYTRNMKKTWRCSQHCSFRCRATLTTIENRVYYSAIYEDGRFLSFRGYKFTRHKVKGHKIRWQCSRQRHARCSAAVYTVEEVIAVSLNAKVDNFSAIKVTSLPGTEYEQLTQGGSILTKVEEVVALQCIRTKKVDQCSQCLPEEGEFCVCQVIDSVSSTQRTSKQDGSVQVSIKDAELTSSRCAVYAKSKRGARILILDGYPFYHHRNTGLKARWFCATHHNKGCKAVIFTACGEIIKANNIHYHTATDDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00301380;
- 90% Identity
- iTF_00301380;
- 80% Identity
- iTF_00301380;