Cleu010709.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- -
- Assembly
- GCA_963082945.1
- Location
- OY720359.1:20008647-20018418[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.7e-13 1.3e-09 38.9 0.0 4 39 148 184 145 188 0.90 2 4 4.2e-12 5.5e-09 36.8 0.5 2 39 200 237 199 241 0.93 3 4 1.4e-15 1.8e-12 47.9 0.2 2 45 255 299 254 299 0.96 4 4 2.1e-18 2.8e-15 57.0 0.1 1 43 306 349 306 351 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGCCTGTCGCAAGTGAAATGCGAACCGCTCTCGGACGAAGAAGACAGCGAGTCACAATTCGCGCACAGTTATCTAGCCAGTCAGGGCAGTGGCTTGGAGGAGTTGGCACCGTTGGCGCCAGCGGGCCCTGCAGCCACGCCGGTGTGTGTCAAGCAGGAGCGAGCGGACTCCCCACCAGCCACCACGCTGGAGACACTCGAGTCGGCACCACATAATGCCAAGGGCGTGTCCTTGTTGGATCGTCACATGGAATTTATGAACGTCACCGAAGTGCCTGACTCCACTGACTTCATGCCGCTGCTGGCTGTGAAGGATGAACCCTCGTCCGAAGGTGAACAACCTCATCTTAGCGGTGAAGACACGAGTGACTCCTGCAGCCGGCAAGCCTCGCCCGCACCGCGACACATCCCTAAGAGCTGGACCCAGCACGATATGGAGCGAGCTTTGGACGCCCTCAGAAACCACCAGATGAGCCTTACGAAGGCATCAACAACGTACGGCATTCCGTCCACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGAGGGCGCCGCCAAGTCCTGGAGCGAGGCGGACCTGCGGGCGGCGCTGCAGGCGCTGCGGGCTGGCGCCATCTCCGCCAACAAGGCCAGCAAGGCTTACGGAATTCCCAGCAGCACTCTATACAAGATAGCTCGGCGGGAGGGCATCCGTCTGTCGGCGCCCTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGCAGCGTGCGCTGGCAGCCATCCGCGCCGGCGCCAGCTCGGTGCAGCGTGCCGCCACGCAGTATGGCATACCTACAGGAACGCTGTATGGTCGGTGTAAGCGAGAAGGTATCGAGCTGTCTCGCTCCAACCCCACGCCGTGGTCCGAAGACGCGATGGGTGAAGCACTTGAAGCTGTCAGGGTGGGGCAGATGTCCATCAACCAGGCCGCGATACACTACAACCTGCCGTATTCTTCTCTGTACGGACGGTTCAAGAGATGCAAGTATCAGATGCAGAGTGTTCTACAAAACCAGCAGCAACCACAGCAAGATCCTCACAAAATGGAGCAAGAGCAGCAACTGCACGAAGTGCAACAGTACTACCACCAGCTACCAGCCCACCAGGACCCGGACTCGCACACGTACGCCCACATGCACGAGTACACCCACGAGCAGTACGGACAGGGCCAGTACTACCAGGGTTTTAACAGTATTGCGACCAGCTGA
- Protein Sequence
- MPGYGLSQVKCEPLSDEEDSESQFAHSYLASQGSGLEELAPLAPAGPAATPVCVKQERADSPPATTLETLESAPHNAKGVSLLDRHMEFMNVTEVPDSTDFMPLLAVKDEPSSEGEQPHLSGEDTSDSCSRQASPAPRHIPKSWTQHDMERALDALRNHQMSLTKASTTYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRAALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQRALAAIRAGASSVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQMQSVLQNQQQPQQDPHKMEQEQQLHEVQQYYHQLPAHQDPDSHTYAHMHEYTHEQYGQGQYYQGFNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041698;
- 90% Identity
- iTF_01029137;
- 80% Identity
- -