Basic Information

Insect: Cerastis leucographa
Gene Symbol: RFX7_1
Assembly: GCA_963082945.1
Location: OY720380.1:12114194-12129603[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-33 1.9e-29 103.3 0.0 3 78 150 225 148 226 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-33	1.9e-29	103.3	0.0	3	78	150	225	148	226	0.98

Sequence Information

Coding Sequence: ATGGATAGTACCAGTCCATTTCAACCTTGGGCCACTGACGATAGtgcaaaaaatgttaaaacggAGAGAGAACTAGTGGATGACGCGAAACTTCATCGGGAAAATGTCAATCATCCAAAACATAGGCAAACTGCGTCTTACAATAAAGAAAGTGTTGCCGTTCCAAGCAGCGCTCCGGGATCGTCGAGCTCCACGGCGCCCGGCGGCGAGCCCGCGCGGGCCAGCGAGTCCAACATGGACTCGGGCAAAATAGCTTCCATGCAGCAGATAGTCGAGAACACCCTCAGTCAGGAGGGCCGACAGAGAGTGGCCCAGCTGCTCGAGGCAGTGGAAGCACTGAGCGGTGCGGAGAGACTACTTTTGTACCTGCGCCTGCCTACCGGAGTGCCCCAACATGATCCCCTCAAACAACCAATCAATCCGCTCGGCTCACGGGCTGAACTTCAGCAGACTGTTACTTGGATACAGACACACTTGGAAGTTGACCCGGATGTATCATTGCCTAAACAGGATGTGTATGATGAATATATTGCACATTGTATGAGCAGTAGTATGAAACCTCTCTCTACGGCGGATTTCGGGAAAGTCATGAAGCAGGTGTACCCAACGGTTCGGCCGCGTCGGCTGGGAACGCGTGGAAACTCCAGATATTGTTACGCGGGACTAAGGAAAAAGATCAAACTAGAAGTGCCACAGTTACCTGATCTGGGTGAATCATCCAAGGAGCCAACTGCGGCATCGAGAGAAACCGAGAGGATAGTTTGTGATTGGGCCGAAACCAAATTAGGCATGAAATTCTCGAGCATATCGGAGCTGTCCCGACACCTGATGTCGGCGAGCTCGCAGCACGCAGCGCCCGGACCCGCCAGCGCGTCGCCGCCGCCGCTTGCGCAGACACACGCACCCGCTGATGACGCAACAAGCCGACAGTTAATAAAACATCTGAAACGAAAAATACAGACACAAGGAACTCCTGGACGGCCTAAAAAGAACAAGGGCCAGGAAGTGTCGGGGGAGTCCCCTCCGTCCACGTCGTACGCGGGCCTCCACCAGCCGATGAAACACGAGAGCGAGCCACCGCCCGACATGAGCTACGGGTACCCGCAGCCGCCCTACCCGCCCGTGTACGACGTGCGCCCGCCCATGCCGTACTCCGTGCCGCCGCGCGCGCACCCGCCCCCGCCGCACCCCCCGCACCCGCACGCGCCCCCCGCGCCGCTCCCGCTGCACGACTACCGGCCCGACCCCTACGCCTTCGAGTCCACGTACGCGCCGCGCGACCTCACGCGCCCACCCGACGCTGCGCACAACCTGCCCATCAACCTCAGCAGCGACGCCTCGCTGGACCTGTCCACCGAGCGCACGGAGTGGGCGAGGCGCCGCCCGCCCGAGCCGCCGCCGCCTGCGCCGCGACTGTCGCTGCCCGGCAAGAAGCTCATCCTCGAGGCCTACCACAGCGAGACGCGCGCCGCCTcgccgcgcgctccgccgcccgACCCGCGCCACCACGTCCCGGACGACTTCCCGCGCACCGAGTACCTCCCCAAGAAGATGCGGGCCGCCGAGATCCTGGGCGGCAAGCTGGCGGCCGCGCGCCAGGCGCTGTCGGGCCCCCCTCCGCCCCccgcgccgcccccgcccccgccCCCCGAGGTGGCCTGCGGCTCCGCACCCGCGCCCGCCGACGTTCCCATTCGTCCCGAGGTTGCTTTTTTAGAGGATCCAAAAAACTTAACGAGCCGGTCCAAAAGCACCGCCGCGGCGCTGGCCCGGGAGGAACAGGAGGCGGCGAGTCCCACACGGTCGGTGAAGGCTCCGACGTCTAAGTCCGAAATGCTGCGCAATAAACTGCGGAAATCGAGCGGCCGAGCCAGTGGACCCTCGCCGGATCGCGCGGGATCGCCAGAGCGAACCGTGACGCCTGATTCGTGTTGCGGTCTAGATGGGATTAATATCAAAACGGGGATGATCTGTGAAGAGAAACATTCGGAAATTCTCAACAGAGAACGTGTGATCAGCATATGTAACATCGATAAACATGATTTAGACGACTATTTGAACGAGGGTAACAGTCAGGAGCACGAAGAAGAATTACTGCAGTATTTTCATCATCGCGCCAATCAAGCGCAGCAAGCCCAAGCGAACGCCAGCACGTCGGATAACACCGCTGCTTTTTTAGAACGACGCCAGGACCCACACGACGACCATAGTCAGGGCAAAAATGAAAAGATATCGCAGCTCAGAGAGTTGTTagctaaaaacttaaaaaaccagAGTGGGTCTAGTTCTCAAAATATGCAAATCAACCAGGAGTCACAACTTTCTCAGGAAAATTCACACGAACCTCCGCCCATGAAGACAACCATTTCAGAAGGAGCCTTTAGACCGCTTGGGACAAATGAACCTGAACTGAATGGGTCAACCCTTACCAACCAAACTGTTATGCACACCAACAAGCACAATAATACGGTTCCGAATCAAAATGGCACGTCTTTATCATATGCACATGATACTGCATCCAATCAAATGCCTGGCAATGTCGGAGGGCCACATCTATATAATGGACATTGTCACAATGAGCCGCAGAGTCCAACTACCAGAACGCAACAATATGAGTTTGTACCAATTTCTGATGGATGCCATTCTCCAGGAAACTTTCATTCCAAGTCACCCCTGGGATTCGGACAGAGGGGTCAAAGTCCAACTAAGGTGAACAAACAAATAATGATGGGCGGTTCGCTACAGACGTCTCCCATATCTCACTCGCACAGCACGGCTGCGAGCCCTTTCGTCAGTCCGAGGAACACCCCGGTGCCGCGCTCGCGGCTGTGCCCTCGACCAATACCTAAACATAATGGAAGAAAACGGCGGAATCCTCTGTCCCTTGGTGTGGCGGATCCGTGCTCCAAACAGTTTGCTATACCCAACGATCAAAAGTTTATGAGCAAAGCACAACTTTGTGGTCCTGTCAAGTACTGCCAACCGATCTCCGCTCCGCCTTCACCGAACATACTTACACAATATAAAAACCATATGTACGCGTGTCCCTCGGGAATGTCTAATGGCTCCAATAATCTTTGTTTGAATTTTTTACCCAACACGCCATTTCGAGATCACATGAATGGAGACCAACCATTGTCTGCTGATCCTTTGTCGAGTGAAGTAAGTCAGTTTTTCCAAGAGTCACAAGTTTATAGATCAGGACCTGACACTTTTAGATCACAATCAGTACCCCTGAAGCAGGGTATAGGAAATATGGGATTATTGAGTTATAACAATACACCAGTAGGATCAGTTCCCCCGACACCCGTCCCAAATGAGTTTTGTGACTTCGGATCTCTCGCCGATACTTGTGACATATCAAAAGCTGGGCTGAATCGAGAAACGCTCGACAAAATATACGACGCTATCGACAGCAGTAACGACGTGCTCACTACTAGCGCCACACAAAGTATTCTCACCTCTACCGACACTTTGAGCAACGGTTGTGATCCCCTCCCCGAACATCAGATACTATCGGATGAGCAATTGACTTCGATTATACCGAGTGGTGACGATTTGCTCGAGAGAAGCAATCAGTTCAACCAATCGTTCACTAACGACAGCGCCGCCGCTGACAACGTGGAAGATTTCCTTAAACGAGCGAATAGTATCGAGTTTGATTTATCGGAATTAGTTACGGAGAAGAATAAATACTACACATCACGATCGGTCCCGAGTACACCGCTACCTTACAAACGCACCGCGCCTAACTTGCAGATAGACTCTCGCCGCTCCAGGGAACTGTTCACAGCCGAGAATTACTCCAACGTATCGAACGGCATATCGTCGAAATCTGTGCCATCGACTCCTCAGTTCGCGGAGGACAGAAGCGTGTTCAGCTACAGCAACAGAGACTTCCTGATCAACGGCAACTCGGTGTGCGGCGCGGGCATGCACGAGAGCGTGGTGGACAGCGAGCCGGGGCTGGCGTCGCCGCTGCACGACATGCTGCGCGAGGACATCCTGGGCGAGCCGCTCACGCCCGCGCTGCTGGCCGACCTCGACAAGATGGACCCCACTCCGTATGTCGATCTCTAG
Protein Sequence: MDSTSPFQPWATDDSAKNVKTERELVDDAKLHRENVNHPKHRQTASYNKESVAVPSSAPGSSSSTAPGGEPARASESNMDSGKIASMQQIVENTLSQEGRQRVAQLLEAVEALSGAERLLLYLRLPTGVPQHDPLKQPINPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMSSSMKPLSTADFGKVMKQVYPTVRPRRLGTRGNSRYCYAGLRKKIKLEVPQLPDLGESSKEPTAASRETERIVCDWAETKLGMKFSSISELSRHLMSASSQHAAPGPASASPPPLAQTHAPADDATSRQLIKHLKRKIQTQGTPGRPKKNKGQEVSGESPPSTSYAGLHQPMKHESEPPPDMSYGYPQPPYPPVYDVRPPMPYSVPPRAHPPPPHPPHPHAPPAPLPLHDYRPDPYAFESTYAPRDLTRPPDAAHNLPINLSSDASLDLSTERTEWARRRPPEPPPPAPRLSLPGKKLILEAYHSETRAASPRAPPPDPRHHVPDDFPRTEYLPKKMRAAEILGGKLAAARQALSGPPPPPAPPPPPPPEVACGSAPAPADVPIRPEVAFLEDPKNLTSRSKSTAAALAREEQEAASPTRSVKAPTSKSEMLRNKLRKSSGRASGPSPDRAGSPERTVTPDSCCGLDGINIKTGMICEEKHSEILNRERVISICNIDKHDLDDYLNEGNSQEHEEELLQYFHHRANQAQQAQANASTSDNTAAFLERRQDPHDDHSQGKNEKISQLRELLAKNLKNQSGSSSQNMQINQESQLSQENSHEPPPMKTTISEGAFRPLGTNEPELNGSTLTNQTVMHTNKHNNTVPNQNGTSLSYAHDTASNQMPGNVGGPHLYNGHCHNEPQSPTTRTQQYEFVPISDGCHSPGNFHSKSPLGFGQRGQSPTKVNKQIMMGGSLQTSPISHSHSTAASPFVSPRNTPVPRSRLCPRPIPKHNGRKRRNPLSLGVADPCSKQFAIPNDQKFMSKAQLCGPVKYCQPISAPPSPNILTQYKNHMYACPSGMSNGSNNLCLNFLPNTPFRDHMNGDQPLSADPLSSEVSQFFQESQVYRSGPDTFRSQSVPLKQGIGNMGLLSYNNTPVGSVPPTPVPNEFCDFGSLADTCDISKAGLNRETLDKIYDAIDSSNDVLTTSATQSILTSTDTLSNGCDPLPEHQILSDEQLTSIIPSGDDLLERSNQFNQSFTNDSAAADNVEDFLKRANSIEFDLSELVTEKNKYYTSRSVPSTPLPYKRTAPNLQIDSRRSRELFTAENYSNVSNGISSKSVPSTPQFAEDRSVFSYSNRDFLINGNSVCGAGMHESVVDSEPGLASPLHDMLREDILGEPLTPALLADLDKMDPTPYVDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00000920;
90% Identity: iTF_00042369; iTF_00809794; iTF_00273349; iTF_00808838; iTF_01192358; iTF_01084871; iTF_00685167; iTF_00176842; iTF_01533674; iTF_00928396; iTF_00373645; iTF_01093773; iTF_00122086; iTF_00924327; iTF_00906794; iTF_00071156; iTF_00237204; iTF_00830901; iTF_00905847; iTF_00038427; iTF_00907615; iTF_01064367; iTF_00973457; iTF_00951528; iTF_00850320; iTF_01230229; iTF_00851423; iTF_01029887; iTF_01061617; iTF_01532763; iTF_00363765; iTF_00036360; iTF_00043222; iTF_00711548; iTF_01062492; iTF_00301834; iTF_01063485; iTF_01118972; iTF_00111312; iTF_00147038;
80% Identity: -