Cpis036386.1
Basic Information
- Insect
- Ceramica pisi
- Gene Symbol
- zfy1
- Assembly
- GCA_963859965.1
- Location
- OY982553.1:14078232-14110866[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.38 43 6.1 0.8 1 23 473 495 473 495 0.97 2 12 1.1 1.3e+02 4.6 6.8 1 23 502 524 502 524 0.97 3 12 1.5 1.7e+02 4.2 1.1 1 15 528 542 528 551 0.82 4 12 2.9e-05 0.0033 19.1 1.8 1 23 556 578 556 579 0.94 5 12 0.0034 0.39 12.5 0.8 2 23 586 607 585 607 0.97 6 12 2.2e-05 0.0025 19.4 0.7 2 23 621 642 620 642 0.97 7 12 0.96 1.1e+02 4.8 3.1 3 23 648 669 646 669 0.95 8 12 0.00013 0.014 17.0 3.1 2 23 680 702 679 702 0.96 9 12 0.055 6.3 8.7 0.8 1 23 709 732 709 732 0.94 10 12 0.0086 0.98 11.3 0.7 5 23 744 763 743 763 0.93 11 12 8.2e-05 0.0094 17.6 4.7 1 23 772 794 772 794 0.98 12 12 0.0025 0.29 12.9 0.4 1 23 799 822 799 822 0.95
Sequence Information
- Coding Sequence
- ATGGATTCGACGTTGCCTTTGGTGGAGATAACTGTGAAGCCTGAACCAATAGAATTTGAGGAGAATGAACAGATTGACAGTCAAGAATCTGAAGAAGTGAAAGAAGAAGAACTATGGATCAAGACAGAGCCCCTGGAAGATGATTCTCAAGACTCCATCAAAGGAGAGGACCAGGGAACACTCTCCGAGAACGAAGCCAGGTTAGATGAAGAAGCCCTGAATGATGGATTGAGCAATTTCCTTAATGAGCACAGGGAGCTTGCCAACTGCATGTTGAGGGGACCCACCGGTAAGGTTAAAGCACACCGGCTTTGGGAAGATATTGCTGAAAAACTTAATAACATTGGTGGTTGTCATAAAACTACACAGCAATGGCAGaggGTGTGGTCGGACAAGAAGTATTTAACGAGAAAAGCGGCGGCTGTCAGAAACGCATCCTTGTCCGGTGGCCTTCCAGCGCCAGATCTGACTCCTCAAGATGAGAAGATCTTGGCTATTATAGGAGAACCGATTCCACCGCGACGAGTTTCTCAGAAGCTGGAAACTCCTGAGCCAAAACAACCTCAAGAAGTTCCAACACTTCCACCAAAGCGAGGTCCCAAACCAGAACGGGCCCCATCTCCACAACCTCCCATCCCTGTGGAAGGCTTTATCCCAGAACCATTACCACCCAGTAGACCTGTACGAAAACCTTATACTCCTAGAAAGACTGAATCTTCAAGGAAAGAGGTGGCAAGGAGATCTGATGTTCCAAATTCAGAGGTGCAATCAATACCAATTATTCCACCGAATGTGATAAGCCAGCCAGTATTGAAACCACCTGATGAACCAGCTAAGGTTGTTATTCAGATAGATGATGATCCGTCGCCATCGTATCATCCTGTTACGGATCTCCCTTCGCCAGTGCCACCGGCAGAAATAAACCCTGAAGCCCGAATAAAACGACGAGCCTCTCTGGACCCATACACAAGGAAACTCATCCACCTAGAAGAAGAAAGACTAAAGAACGACGCAAAAAGAAACTCTGAACTGTCAGAGATAAGACTCAGTTTACAACAAGGGACAGCAGAGTTGACAGAAATCAGGAAGGTCATGCAAGAAATGGTGGGCCTCATGAAACAATTCGCGGAAAGGGACAACATAAAATCCAAAGATCTAAAATCAAGATTGCCGCTAAAGAAGAGATTAGAGAAGCCAATCAAGCAAGAAGATGAAGTTATTCCAAAACAAGAAAAAACAGAGGAAAAGAACGAGGCCGAAGAAAATGAACAGCAAGAGGAAAATGCAGAACCTAAGATGGAAACCCCCTTGATGTACTCCTATGAAACATTGAAGAACATAGAAATAGTGACCATCGACGAAGAAGAACGCCAGAAAGAGTACGAGAAGACGCTGAAGGCACGTGAACACATGCGTCATGTGTGTGTGCACTGCGCCATCGGCTTCGTACTCAAGCAGGCGTTCGATATGCACATGAAAGTTCATTCTCCTGAATCAGGCGACCACGAATGCCTTCTCTGCCACTGCCGTCTCAAAACCGCTGACATGCTGTACAAGCACCGCTTACGGCACTACCGCCGCTACCGGTGCTTGCTCTGCCGGATGCGGTTCAAAGACAAGGACACTGCCGCCTGCCATGTCATGAATGACCATACGGGGCAGACCTTCGAGTGTGATCGCTGTGGGAGAGGATTCAAAAGACCACAGTACCTTAAGAAGCATGTGGCGCAACATCACACCAAGCCCCACGATCTTGTCTGCGGCGTCTGCTTCCGAGTCTTCCACGAACGCGGCTGGTATAGGTCTCACATCAGGACTCATAATGAGGAGGTTCGAGCCAAGACGGTCCGGTTGCCAGTCACCTGCGAGATATGTTCGCGCGACTACAAGAACAAGGCGAGTCTGAAGCGTCATCTCCTCACCCACGACGAGGACGTCCATTGTGAGATCTGTTTCGAGAAATGCAAGAATCGGATCACTTTGGGGAATCACTACCTGAAAGTTCATAATGAGAAATATGTAGGTGCGCCTGAGCAAACGTGCCCCCATTGCGACCGCATCTGTGCGACGCGTGCGATGCTCAAGCGACACATACAGAGAATGCACAGCGATAGAACTAAGAAATACCAATGCGACTACTGCCAGCGCTTCTACCTGACGAAGGGCGAAGTCCGATCACACATCACGTGGTCCCACATGCCGGCGGAGGCCCGCGGGGGTCACGCGTGCACGTGCGGCCGCATATTCCGGAGCCCCTCGCTGCTGCGCGACCACAAGGCCAGGTTCCACGCCGCGGAGCCACCGCCAAGAGTTCACCAGTGTGACCACTGTGACAAAGCTTTTGCGAACAAGCAAGTCCTCAATCGCCACAAGAAAAGCCACTCCAATGAGATGTACCCCTGCAACGAATGCGGCCTGCTGTTCAAGACGCAGCCCTACGTGAAGGTACACTACCAACTGAAGCACCTCAACATGACCCGAGCACAGATCAAGGCGCAGAGGAAACTCAACAGAGAACAGATCATACAGAACAATATCAACAAGAGTACGAATTGGGAACCACACATTGCCGACAAGAAGACTAGTGCAGTTGCTGTTGAAATTGAAGAAGACCCACTCTTAGTACAGGAGGGGGAAGTACCACTCAAGACGGAGCAagaaaatgaatttaaaatCCCAACTTTCCAAACTTTTGTTGATATTAGCAGGGATTAA
- Protein Sequence
- MDSTLPLVEITVKPEPIEFEENEQIDSQESEEVKEEELWIKTEPLEDDSQDSIKGEDQGTLSENEARLDEEALNDGLSNFLNEHRELANCMLRGPTGKVKAHRLWEDIAEKLNNIGGCHKTTQQWQRVWSDKKYLTRKAAAVRNASLSGGLPAPDLTPQDEKILAIIGEPIPPRRVSQKLETPEPKQPQEVPTLPPKRGPKPERAPSPQPPIPVEGFIPEPLPPSRPVRKPYTPRKTESSRKEVARRSDVPNSEVQSIPIIPPNVISQPVLKPPDEPAKVVIQIDDDPSPSYHPVTDLPSPVPPAEINPEARIKRRASLDPYTRKLIHLEEERLKNDAKRNSELSEIRLSLQQGTAELTEIRKVMQEMVGLMKQFAERDNIKSKDLKSRLPLKKRLEKPIKQEDEVIPKQEKTEEKNEAEENEQQEENAEPKMETPLMYSYETLKNIEIVTIDEEERQKEYEKTLKAREHMRHVCVHCAIGFVLKQAFDMHMKVHSPESGDHECLLCHCRLKTADMLYKHRLRHYRRYRCLLCRMRFKDKDTAACHVMNDHTGQTFECDRCGRGFKRPQYLKKHVAQHHTKPHDLVCGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPVTCEICSRDYKNKASLKRHLLTHDEDVHCEICFEKCKNRITLGNHYLKVHNEKYVGAPEQTCPHCDRICATRAMLKRHIQRMHSDRTKKYQCDYCQRFYLTKGEVRSHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHAAEPPPRVHQCDHCDKAFANKQVLNRHKKSHSNEMYPCNECGLLFKTQPYVKVHYQLKHLNMTRAQIKAQRKLNREQIIQNNINKSTNWEPHIADKKTSAVAVEIEEDPLLVQEGEVPLKTEQENEFKIPTFQTFVDISRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00974130;
- 90% Identity
- -
- 80% Identity
- -