Basic Information

Insect: Ceramica pisi
Gene Symbol: -
Assembly: GCA_963859965.1
Location: OY982538.1:19482257-19495536[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.24 28 6.7 0.1 3 23 117 137 115 137 0.96

2 19 0.013 1.5 10.7 0.2 2 23 141 163 140 163 0.95

3 19 3.2 3.6e+02 3.2 3.8 2 23 214 236 213 237 0.91

4 19 0.0044 0.5 12.2 0.5 2 23 392 414 391 414 0.95

5 19 0.075 8.6 8.3 0.2 1 20 422 441 422 443 0.94

6 19 0.0022 0.26 13.1 0.6 2 23 453 474 452 474 0.94

7 19 10 1.1e+03 1.6 1.5 1 23 490 513 490 513 0.84

8 19 0.0048 0.55 12.1 1.7 1 23 522 545 522 545 0.94

9 19 6.5 7.5e+02 2.2 1.6 8 23 595 611 587 611 0.88

10 19 4.5 5.1e+02 2.7 0.1 2 21 623 642 622 645 0.75

11 19 6.3e-05 0.0072 18.0 1.8 1 23 679 701 679 701 0.96

12 19 0.0013 0.15 13.8 1.9 1 23 708 730 708 730 0.98

13 19 0.00011 0.012 17.3 2.3 1 23 735 757 735 757 0.96

14 19 0.0014 0.16 13.7 1.3 1 23 763 785 763 785 0.98

15 19 2.9e-06 0.00033 22.2 2.6 1 23 791 813 791 813 0.98

16 19 0.00038 0.044 15.5 2.6 2 23 820 841 820 841 0.98

17 19 0.001 0.12 14.2 0.7 2 23 849 871 848 871 0.97

18 19 3.4e-05 0.0039 18.8 0.5 1 23 876 898 876 898 0.97

19 19 0.00076 0.087 14.6 0.7 2 23 905 927 904 927 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.24	28	6.7	0.1	3	23	117	137	115	137	0.96
2	19	0.013	1.5	10.7	0.2	2	23	141	163	140	163	0.95
3	19	3.2	3.6e+02	3.2	3.8	2	23	214	236	213	237	0.91
4	19	0.0044	0.5	12.2	0.5	2	23	392	414	391	414	0.95
5	19	0.075	8.6	8.3	0.2	1	20	422	441	422	443	0.94
6	19	0.0022	0.26	13.1	0.6	2	23	453	474	452	474	0.94
7	19	10	1.1e+03	1.6	1.5	1	23	490	513	490	513	0.84
8	19	0.0048	0.55	12.1	1.7	1	23	522	545	522	545	0.94
9	19	6.5	7.5e+02	2.2	1.6	8	23	595	611	587	611	0.88
10	19	4.5	5.1e+02	2.7	0.1	2	21	623	642	622	645	0.75
11	19	6.3e-05	0.0072	18.0	1.8	1	23	679	701	679	701	0.96
12	19	0.0013	0.15	13.8	1.9	1	23	708	730	708	730	0.98
13	19	0.00011	0.012	17.3	2.3	1	23	735	757	735	757	0.96
14	19	0.0014	0.16	13.7	1.3	1	23	763	785	763	785	0.98
15	19	2.9e-06	0.00033	22.2	2.6	1	23	791	813	791	813	0.98
16	19	0.00038	0.044	15.5	2.6	2	23	820	841	820	841	0.98
17	19	0.001	0.12	14.2	0.7	2	23	849	871	848	871	0.97
18	19	3.4e-05	0.0039	18.8	0.5	1	23	876	898	876	898	0.97
19	19	0.00076	0.087	14.6	0.7	2	23	905	927	904	927	0.97

Sequence Information

Coding Sequence: ATGTCTTCGGATGAGTCTGATAATGAACCGCTatctgttatagcggcaaataAGAAATTAGACTCAGAAGAATATGAAGAGACATCATCAGATTCATCAGACTCCGAAGAGTCGCCGGATAGGAAGAAAAAGAAGTTACCACCTCCTAAGCGGCTCTCGGTCACAATAAAGCTTCAACGCAAGAAGGCTGCTGAGACACCACCGGTGATAGAGCGGCCGGCAGACGTGTGGTTGTACCTAAAAGAACTGAATCCTACGGGTCCCTACAGCTGCTTACTCTGCACAGACTGGTTCATAAACAGATCCAAAATGATTATTCATTACGTCCTAAACCATAAGAAAGACTTCTGTGGTATTTGTAGATACTTTGTACCTGATAGAGAGGCGTGGGCGAAACATATGAAGTTTCATACTCCGTGGCCATGCTCACAATGTGTTGAGAACTTTGAAACGGAAACAGAGCTCCGCCTTCATCTCAAGTCGCGTCATAGTCTCGTGCATTGCAGACTCTGTCACTTCCGTGTACATGACGGTGATCTGTACCACTCACACTTGTTCCAAAAACACAACGTCTCCAATGTATCCAATAAAGATGAAGAAACTCTTTGGGAGTTAGAATATGATGGCACTTCAAACTTCCTCTGTTTACTTTGTAATAAATCTTCCAACTCTACTAGAACATTCTTCAATCATTACATGGGGTATCACCACttcaccataaaatgctttgctGCTGTGTTGTCAGGTAGAGACATACCATTTTCAGTGTATGGTGCCGATCTCAGAGCTCAATTTGTTGAAGAACaactaaaaaaacatgaaaGATATGGCTATGTTGATTCCGATTTCAAGCCTAATGACTGTGTTATAGTAGACGACACAAATCAAACTAGAGATTTATTAAAAGTTCTCATACCAGAAATAAAACGAGAGGTGGAGACTGCTGATGAAGCCAAGAATGATGATGAAACTTCAAAGTCCAAGGATGAAGAAGTGTACAAAAACTACAAcggtattgatgattttgatgttaCTTTAATGGAGCTAATAGTTGTACAGAAATGTTATCATGATTACATCTCTGATATATTATCAGATATAAATGCTAATTCATTTTTTGAATACTCGGATGTTGACTATGAGAAGCTCACAACCGAAGTAGCCATGGATATAGTTTGTACACTGTGCAGTATACGATACAGTACATTGTCAAGTTTTGCCAATCACATGTTCAAAATGCATTGCATAAAGTCCTTGCCGATATTCTCATGCCGAGTGTGTGCAACTACTTTTGACACTCAAAATGATCTGGACAATCATGTATCAAATGAGTTGGGAGAATTTGAGGATCTGTGGATATGTCAGTTCTGTGATAAAGAGTTTGATGACAGGGAGAATACGAGGCGACATCTGACGGAACATTGGGAGCATGTAGAATATGACAACTGTTTCAGCCCACATTTAGGCTTTAAATGCCGGTATTGTCCGACACTGTTCTGGCATGAAACGGACAGAGAGACGCATCAGGTGCGGGCGCATTTCTTCAACCATAAAGATGCTTATTATAAGTGTGAGAGCTGCAATGAAATGTTTAGTGATAAGGTCTGGTATGTCCACCACTACTTAGAAAAGCACAGTACCCCAGACTCAACAGCACTGTACCTCCTCAAATGTTCTCTGTGCTGTGTGGTGATGCCAAGTATCGAGGAGATGAGAGGGCACTTCAACCTTGAACACTCTGAAGCTAGGAAGGTGTTCTGCTCGTTAGACTCCTGTCAGTACAAGCCTTTGAGTCATCGGAAGTCTTTCAAGTTACACTTGCGGACGATGCACACAGCCCGCGGGTCACGGCCGGAGCCGTCGGTGGAGTGCGCGGTGTGCGGCCGCGAGTTCGGCAGTACGCGCGCGTGCGGCGCGCACATGGCGCAGGCGCACGGGCCCGGCAAGTTCAAGTGCAAGCTCTGCAGGGAGATCCTGCACACCACAGACGAGAGGAAACTCCACTATCTTATAAGTCACCCCGGCCAGCATCCGTTCGAGTGCTCAGAATGCGGCAAATCGTTCCAGTATAAGTCGTCTCTGTACATGCACAAGCAGGACCACGTGCCCAACAAGCAGAACTATACCTGTACCTTCTGCGGAAAGACTTTCTTGAAACGCGACTCCTTCCGGGAACACGTTCAAATCCACGAAGGCCCGCGTCACGCGTGTTCGTACTGCCCGATGCGCTTCGTGCAGCGCTCGAACATGTTACGTCACGAGCGACGTCACACCGGCGAGCGCCCGTATGCCTGCCCGCACTGTCCGCGGAACTTCGCTGATAAGGGAGCCTGTAACTCACATGCCAGAACCCATTTGAAAGACACGTCGTACGCTTGTATGTACTGCGGCAAGACGTTCGTGCAGAAGTCCAAGCTTACGTATCACACCAGGAAACATACTGGAGAAAACCTGGAAACGTGTACAATATGCTCAAAGTTGTTCACAAGTGCGTGCTCGCTGCGAGAACACATGAAAATACACGAACCTAAGAAGAATCTGGTCAAGTGTCCTCTTTGTGATCGCAAGTATCAAGATGAGCGCTACATGCTGCGTCACCTGCGCAcctcacacacacacgcgcggCATCCCTGTCCCATCTGCAACAAGACGTTGACCAGCCCCGCCGGGCTGCGACACCACGTCATCACTCACAGCTCACTGAAGACCATCAGGTGTAAAATGTGTCCAAAAGCGTATTCAGTGAAAATAACAATGATCAAACATTTACGCCGTCGACATGGCCTCAAAGGTACAGAACCTAACATCAAAGAGTTCTACACTAGACTTGACCCTAGAGAGTGTAACCTAGGCCTGGACGAGCCGATCATGACCAGTATATTCGGACCTCCTCCAAAGAAACCGAGGGATGAGGTCCTGATAGCAGATTACGTTACTGTAGCTAATATAGAACCTGTAGGAGGGGATAACGAAGAGAGCCAGAGCACAGAAGATACACAAGATTCACTTAAACTGAAGTCTCAGACAGACGATGGAGAGTCGACAGAGAGTGACAAGGAAAAGAATAGTCTTTTAACATCGgaaaagaaaattgaaataaaaattgaacctaAAGAGCCGTCTGAGCGCAGCGGCGAACTGGAACCTACTGACTTTGTTAGTGTTAAGATTGAACCATTGGATGATGAGCATGCTGGGCAGGAGTCGTAA
Protein Sequence: MSSDESDNEPLSVIAANKKLDSEEYEETSSDSSDSEESPDRKKKKLPPPKRLSVTIKLQRKKAAETPPVIERPADVWLYLKELNPTGPYSCLLCTDWFINRSKMIIHYVLNHKKDFCGICRYFVPDREAWAKHMKFHTPWPCSQCVENFETETELRLHLKSRHSLVHCRLCHFRVHDGDLYHSHLFQKHNVSNVSNKDEETLWELEYDGTSNFLCLLCNKSSNSTRTFFNHYMGYHHFTIKCFAAVLSGRDIPFSVYGADLRAQFVEEQLKKHERYGYVDSDFKPNDCVIVDDTNQTRDLLKVLIPEIKREVETADEAKNDDETSKSKDEEVYKNYNGIDDFDVTLMELIVVQKCYHDYISDILSDINANSFFEYSDVDYEKLTTEVAMDIVCTLCSIRYSTLSSFANHMFKMHCIKSLPIFSCRVCATTFDTQNDLDNHVSNELGEFEDLWICQFCDKEFDDRENTRRHLTEHWEHVEYDNCFSPHLGFKCRYCPTLFWHETDRETHQVRAHFFNHKDAYYKCESCNEMFSDKVWYVHHYLEKHSTPDSTALYLLKCSLCCVVMPSIEEMRGHFNLEHSEARKVFCSLDSCQYKPLSHRKSFKLHLRTMHTARGSRPEPSVECAVCGREFGSTRACGAHMAQAHGPGKFKCKLCREILHTTDERKLHYLISHPGQHPFECSECGKSFQYKSSLYMHKQDHVPNKQNYTCTFCGKTFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRNFADKGACNSHARTHLKDTSYACMYCGKTFVQKSKLTYHTRKHTGENLETCTICSKLFTSACSLREHMKIHEPKKNLVKCPLCDRKYQDERYMLRHLRTSHTHARHPCPICNKTLTSPAGLRHHVITHSSLKTIRCKMCPKAYSVKITMIKHLRRRHGLKGTEPNIKEFYTRLDPRECNLGLDEPIMTSIFGPPPKKPRDEVLIADYVTVANIEPVGGDNEESQSTEDTQDSLKLKSQTDDGESTESDKEKNSLLTSEKKIEIKIEPKEPSERSGELEPTDFVSVKIEPLDDEHAGQES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758517;
90% Identity: iTF_00852095;
80% Identity: -