Cpis004960.1
Basic Information
- Insect
- Ceramica pisi
- Gene Symbol
- clz9
- Assembly
- GCA_963859965.1
- Location
- OY982528.1:24927984-24929105[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-08 2.4e-05 25.2 0.0 5 43 1 38 1 40 0.92
Sequence Information
- Coding Sequence
- ATGACGGCAGCCTTAAGAATGGTAGAAAATGGTAACTCCATTAGGACGGCAGCAAAAACCTGCAACATTCCGTACCCTACATTGCGCCGTTACGTGAAGAACAAAAGTGAACATGGTAATAATATATCACTTGTACCCAGGTACGATATTAATAAAGTATTTAGTGAAGAACATgaacaaatattattaaaatactacAAGGACTGTGCACTAATGTTCTACGGTTTAACCGTCAAAGAATGTAGGAAGGTGGCTTATGAAATGGCAATGCGTAATGGCATCAAAATGCCAAGCTCATGGAAAAGAGATCAATTGGCAGGTTTGGAATGGTTTCGTTTCTTCAAAAAAAGACATCCTGATATTTCGGTGAAGAAACCAGAAGCTGTTAATCTCGCACGAGCTACCTCATTTAACCGTGAAACTGtggcaatattttttaataatttggaAGAGTTGCTGAAACGAGAGCCTAGATTCGCGGATGGAACTCGCATATTCAACCTTGACGAAACCGGCACAACCACCGTCCAGAAACCTCAGAAAGTTGTAGCTCCAGCAGGAGCAGGTAAAGTCACAAGTGGAGAAAAGGGCACTCTTGTCACTACATGCTGTATGGTTAGTGCTACAGGCCACGCCTTGCCCCCGGTTATAATATTTCCTCggaaaaactttaaaaacttgATGATGCTCGGTGCACCGCCCGGTAGTTTAGGGCTCGCGAATCCATCAGGTTGGATGACTAGTGACTTATTCGTGGAGGTGATGAAACATTTCATTAAGTGTTCAAGCACGACACCAGAAAATCCATGTCTGCTAATAATGGATAATCATGAGTCACATTTGTCCATTGAGGCTGTGGATTTGGCGAAACAATCTGGTGTTGTAGTTCTCACGTTTCATCCTCACTCTACTCACAAACTGCAACCCTTAGATGTGGGTTTGACGGGCCCTTTAAAGAGCTATTATTATTCCGCACTTGAGTCATGGATGCTACAGAACCCAGGGAAACCAGTTACAATCTACGAGATAGCAAGATTCATTGGTCATGCTTATCCCAGATCTATGACACCACTAAACATATCGGCAGCTTTCGCAAAATGTGGAATTTTTCCCTTTAATTAG
- Protein Sequence
- MTAALRMVENGNSIRTAAKTCNIPYPTLRRYVKNKSEHGNNISLVPRYDINKVFSEEHEQILLKYYKDCALMFYGLTVKECRKVAYEMAMRNGIKMPSSWKRDQLAGLEWFRFFKKRHPDISVKKPEAVNLARATSFNRETVAIFFNNLEELLKREPRFADGTRIFNLDETGTTTVQKPQKVVAPAGAGKVTSGEKGTLVTTCCMVSATGHALPPVIIFPRKNFKNLMMLGAPPGSLGLANPSGWMTSDLFVEVMKHFIKCSSTTPENPCLLIMDNHESHLSIEAVDLAKQSGVVVLTFHPHSTHKLQPLDVGLTGPLKSYYYSALESWMLQNPGKPVTIYEIARFIGHAYPRSMTPLNISAAFAKCGIFPFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154430;
- 90% Identity
- iTF_00985968; iTF_00985966; iTF_01091668; iTF_00154430; iTF_00154431;
- 80% Identity
- -