Adep022500.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- clz9
- Assembly
- GCA_963662175.1
- Location
- OY759218.1:30090458-30091858[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 1.8e-05 25.8 0.0 2 40 16 53 15 57 0.89
Sequence Information
- Coding Sequence
- aTGCCAAGACCGAAAAATAAGGAACGGAAAATAGGAAAACACAAAAAAGAGGACATGATGTCAGCTTTACAAATGGTACAAAATGGTAACTCCATTAGGACGGCGGCAAAAACCTGTAAAATTCCGTACCCTACATTGCGCCGTTACGTGAAAAACAAACGTGAACATGGTGATAATATATCACTTGTACCTAGGTATGATATTAATAAAGTGTTTACTGAAGAACatgaacaaatattattaaaatactacAAGGACTGTGCAATAATGTTCTACGGTTTGACCGTCAAAGAATGTAGGAAGGTGGCGTACGAAATGGCAAAGCGTAATGGCATTAAAATACCAAGCTCATGGGAAAGAGATCAATTGGCAGGTTTGGAATGGTTTCGTTTCTTCAAAAAAAGACATCCTGATATTTCGGTGAAGAAACCAGAAGCTGTAAGTCTCGCACGAGCTACCTCATTTAACTGTGAAACGGtggcaatattttttaataatttggaAGAGTTGCTGAAACGGGAGCCTAGATTCGCGGATGGAACTCGAATATTCAACCTTGACGAAACCGGCACAACCACCGTCCAGAAACCTCGGAAAGTTGTGGCTCCAGCAGGAGCTAAAGTGAGTAAAGTGACAAGTGGAGGAAAGGGCACTCTTGTCACTACATGCTGTATGGTTAGTGCTACAGGCCACGCCCTGCCCCCTGCTATAATATTTCCTCGcaaaaactttaaaaacttGATGATGCACGGTGCACCTCCAGGTAGTTTAGGGCTCGCGAATCCTTCAGGTTGGATGACTAGTGACTTATTCGTGGAGGTAATGAAACATTTCATTAAGTGTTCAAGCACGACACCAGAAAATCCATGTCTGCTAATAATGGATAATCATGAGTCACATTTGTCCATTGAGGCTCTAGATTTAGCGAAACAATCTGGTGTTGTGGTTCTTACGTTTCATCCTCACACTACTCACAAACTGCAACCCTTAGATGTGGGTTTGATGGGCCCTTTAAAGACGTATTATTATTCCGCACTTGAGTCATGGATGTTACAGAACCCAGGGAAACCAGTTACAATCTACGAGATAGCAAGATTCATTGGTCATGCTTATCCCAGATCTATGACTCCACTAAATATATCGGCAGCTTTCGCAAAATGTGGAATTTTTCCCTTTAATAAGGATATATTCTCCGATGAAGACTTCATGCCAAGTAGCGTGACAGACCGCCCCATTCCTGTGGTGTCACAAAAATTGCCTGATGCTGAATCTTCTGCAATTGCTCCTCTAGAGACACGTCGTTCAAGTTATGATCCCGTTGTTACCCCTGATCGAGAAAGTCCGTCTATAATCTCACAACTTTATAAGTTTCATCACTGTAtgataagttttttttgttag
- Protein Sequence
- MPRPKNKERKIGKHKKEDMMSALQMVQNGNSIRTAAKTCKIPYPTLRRYVKNKREHGDNISLVPRYDINKVFTEEHEQILLKYYKDCAIMFYGLTVKECRKVAYEMAKRNGIKIPSSWERDQLAGLEWFRFFKKRHPDISVKKPEAVSLARATSFNCETVAIFFNNLEELLKREPRFADGTRIFNLDETGTTTVQKPRKVVAPAGAKVSKVTSGGKGTLVTTCCMVSATGHALPPAIIFPRKNFKNLMMHGAPPGSLGLANPSGWMTSDLFVEVMKHFIKCSSTTPENPCLLIMDNHESHLSIEALDLAKQSGVVVLTFHPHTTHKLQPLDVGLMGPLKTYYYSALESWMLQNPGKPVTIYEIARFIGHAYPRSMTPLNISAAFAKCGIFPFNKDIFSDEDFMPSSVTDRPIPVVSQKLPDAESSAIAPLETRRSSYDPVVTPDRESPSIISQLYKFHHCMISFFC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154431; iTF_00300134; iTF_00111593; iTF_00985966; iTF_00985968; iTF_01091668; iTF_01230480;
- 90% Identity
- iTF_00300134;
- 80% Identity
- -