Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: -
Assembly: GCA_963576895.1
Location: OY756377.1:365126-373942[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.9e-05 0.0027 18.5 0.9 1 23 132 154 132 154 0.96

2 15 0.0081 0.37 11.7 2.3 3 23 162 182 160 182 0.97

3 15 0.0002 0.0089 16.8 0.1 1 23 297 319 297 319 0.98

4 15 0.54 24 6.0 0.9 2 23 326 348 325 348 0.94

5 15 0.0011 0.047 14.5 0.1 2 23 387 409 386 409 0.94

6 15 0.03 1.4 10.0 0.0 1 23 440 462 440 462 0.95

7 15 0.02 0.88 10.5 0.1 2 23 469 491 469 491 0.96

8 15 0.00012 0.0052 17.6 3.6 1 23 497 520 497 520 0.98

9 15 0.00011 0.0051 17.6 4.6 3 23 531 551 529 551 0.96

10 15 0.00029 0.013 16.3 1.0 2 23 557 578 556 578 0.96

11 15 1.7e-05 0.00075 20.2 0.4 1 23 586 608 586 608 0.98

12 15 0.0013 0.06 14.2 0.2 1 23 614 636 614 636 0.97

13 15 0.00075 0.034 15.0 0.3 1 23 642 664 642 665 0.95

14 15 1 46 5.1 0.1 3 23 681 701 680 701 0.96

15 15 0.001 0.045 14.6 0.3 1 23 970 992 970 992 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.9e-05	0.0027	18.5	0.9	1	23	132	154	132	154	0.96
2	15	0.0081	0.37	11.7	2.3	3	23	162	182	160	182	0.97
3	15	0.0002	0.0089	16.8	0.1	1	23	297	319	297	319	0.98
4	15	0.54	24	6.0	0.9	2	23	326	348	325	348	0.94
5	15	0.0011	0.047	14.5	0.1	2	23	387	409	386	409	0.94
6	15	0.03	1.4	10.0	0.0	1	23	440	462	440	462	0.95
7	15	0.02	0.88	10.5	0.1	2	23	469	491	469	491	0.96
8	15	0.00012	0.0052	17.6	3.6	1	23	497	520	497	520	0.98
9	15	0.00011	0.0051	17.6	4.6	3	23	531	551	529	551	0.96
10	15	0.00029	0.013	16.3	1.0	2	23	557	578	556	578	0.96
11	15	1.7e-05	0.00075	20.2	0.4	1	23	586	608	586	608	0.98
12	15	0.0013	0.06	14.2	0.2	1	23	614	636	614	636	0.97
13	15	0.00075	0.034	15.0	0.3	1	23	642	664	642	665	0.95
14	15	1	46	5.1	0.1	3	23	681	701	680	701	0.96
15	15	0.001	0.045	14.6	0.3	1	23	970	992	970	992	0.99

Sequence Information

Coding Sequence: ATGGAGAACACCTTCACCCTGCGATGGGACAATGATCCCAGGTCCCAAGGGGGCAGCATGGTGGGGGAGGAGGTGATTTGTGACATGGAGACAGTGAATACGGGACATCTTAGTCCCGACACAATAATTCCCGACATGGACAGTGAGCAGATGGCTGCAGAGAACCTGGTGTACCTGTCGCAGGACGTGGTGGGGGTGGGGGAGGTGGTGGAGATGGAGTGCCAGGTCACCGAGGAGGTCATCACGGATGACTGGGTGCAGCCCGGAGGACAGGAGAGGGTGGAGGTGCCTTTGGACCAGCTGCTTGTGGTGACCACGGAGCAGTGCAATGAGGAGAATAATATAGATGTGCCACTACCAACTGATCAGGATGAATACACGGCTATGCGGCCGTACCCGTGTGACTTCTGCTCTCGCAGGTTCCGCAAGAAGGCCAACCTGGTGAACCACATGACGGCTCACCAGAACGATCGCCCCTACGGCTGCAACCTGTGTGGGGCGCGCTACGTGAGGCGCTGTGATCTCCTGCATCACCTCAAGGTGCACGCCTATGTGCCCGATGAGGAGGAGGAGAAGGATAATGAATATGATTTACTGAAGGTACGAGCAGTCTCTAAACGTAAAGCTAGAAGAAGATCTCGTGTTTCATCTGAGAATGGTGGCTTATCATTCTCCTCGTCGTATTCCCTGGATGCTGACACCTCCGTGGCGGCCCGCACCCAGCAGTACGGGGGACAGGGACAGTTGGTGAACAACAACACCATCAACTCCACGACAACGCCCCACGCCACCACCAGCTCCTCCAGCAGACACCAACACAACATTCCCACACCAGAGGTGCCTCCGGTAGTGAACAACAGGTTCTCTGTGACAGATCCGCGCAGACCTTTCGTCTGTCAACATTGTGGCGTCGGGTTCGCCAGAGAGAAGGCTCTGGCTTCACACGCAAGGATTCACGGTGGTGACTCTCCCTTGGAGTGCAACGTGTGTGGAGAGTTGTGCTGGAGCAGGGAGCAGCTGACTGTCCACTACAAGAACAAGCACCCGCACAGGCCTCTGCCTTCCATGGGGAACACTTCACAGGACCAGATGCCATTTGGAGAGACAATGTCAGATACCTCTCTTCCTGATGTGAATGACATAGGAAGTCCGGAGTTGACTTGCAAGGACTGCGGAGCGGGATTCCAGAGGGTGGACCTCCTCAGGAGACATGTCAAGGCGGCACACAGCTACAAGTTGGAACCTCTGGATCCGCTCGACGATTCAGTGATGGGTGAAGTGGAAGGAGACGACAATGAAATGTGGGAGGAGTTAGAGCACACTTGCGGGGCGTGCGGAGAGGGCTTCAGGGACGCACTGGATCTCTTGGCACATGCAGAGAGTCATGCACGGAGTAGAAATAACAGATGTATGCAGTGCGGAGAGAAGTTCTCGGACGAGCAGTCCATGGCGGACCACGTGGAGACGGCACATGGCCCCATATCCTCGTACACGTGCACCCGCTGCGGCCGAGTGTGCCGGGACAAGAGGGCCCTCATGAAGCACACACAGACCCAACACTCCACCACGCAGCTCACTCAGCAGTTGTTCTGCTCAAAGTGCGGGAAGAGCTTCCACAATAAGGCCAGATTAAAACGCCACATGACGAGTCACCGTGACAAGGCGGTGTCTTGCAACATCTGCGGCGAGAGCTTCACAGACGGCCGCTCCCTCATGAACCACAGACACTCGCACTCCGCCTCGGCTGCCAGGCAGTTCCCTTGCAGGGAGTGTGGAAAGACGTTTGGCTCTCGCTCCAGTCAGCAGATCCACATCAGAATTCACACAGGAGAGCGACCATACGCATGTAGATTCTGCTGGAAGGCATTTGCTGACGGTGGCACGCTCAGGAAACACGAACGCATCCATACAGGGGAGAAGCCCTATGCTTGTGCAGTGTGCCCCAGAGCCTTCAACCAGAGGGTGGTCCTCAGGGAGCACGTCAGGTCACACCATTCAGCACCTGATGCTAGAAGAGGAACAGGAGCAGCACCCTTCTGGTGTGCAGTGTGCGGTCGTCTCCTCCACACATCAGGAGAGCTGGTCCAACATCTCATCCAGCACAGTGATGCCAACACGGCCCTCAAGAGGCAACCGCAGACCGGTCCTAGGAAATACAAGAGGCGAAGAAAATTAAAACCACACGAAGTCGAGATGTTCTCCAAAGTGGAGGAGAGAAACGACTCTGAGAATAGCTTACCAGAGCCGGAGGAGGAGGAACCTGAATCTGTTGTCGTAGTAAAGAGGAGGGCCTCCCAGGGCAGCAGGAGAGGCAGGAAGAGTAAAGTCAATAGTACGCCACCCAAGGAGAGTAATTACACGGCCATGTTGGAGTCTATAGCGAGTCCCAAACGTACTGAGCCGGCAGTGGGGACCAGCGGGAGTGCCAGGACCAAGGGGAAGGGGAGAATGAAAAGGGAAGTGGCGCAACCAGCGCGACCCAAGATGATCCACACTCAGAAGATTAAAGGGACCAGTGAGCCTGCTGCCACACCCACTCGAGGACGCAGAAGATGTACTGTGGCCTCCACGACGACAGCCACTGTCACATCTGGCAGTACAGAGGAGAGGCGACCCAGGACTAAGAATGTCCGTTACCATGAACCGGGACGCCCTCCAACCGCCACCTTCCCCCCAATCAAGATGGAACCAGATACGGACATCGCCGCTGATTTGAGAGAAATACTCCGTGCCCCGTCTTCACCATTGACTACAGCCACAGTCACGACGTCGAGTAGGAGAGAGCGCTCAACAAGAAGAGCAGAGGCGGCACAGTCTATAAACGCAACTCCCCCAGCCGCTCTACCCAGCACGGCCAACGGTGTGAATGTAGCAAACGTCAAGTTGGAAACTGAAGAGTTGGGTTCATTCAAGTGCGAAATGTGCTCATTAGACTTCTCGCTGAGAGACGAACTATTATCTCACGTTCGCATTCATATTTGA
Protein Sequence: MENTFTLRWDNDPRSQGGSMVGEEVICDMETVNTGHLSPDTIIPDMDSEQMAAENLVYLSQDVVGVGEVVEMECQVTEEVITDDWVQPGGQERVEVPLDQLLVVTTEQCNEENNIDVPLPTDQDEYTAMRPYPCDFCSRRFRKKANLVNHMTAHQNDRPYGCNLCGARYVRRCDLLHHLKVHAYVPDEEEEKDNEYDLLKVRAVSKRKARRRSRVSSENGGLSFSSSYSLDADTSVAARTQQYGGQGQLVNNNTINSTTTPHATTSSSSRHQHNIPTPEVPPVVNNRFSVTDPRRPFVCQHCGVGFAREKALASHARIHGGDSPLECNVCGELCWSREQLTVHYKNKHPHRPLPSMGNTSQDQMPFGETMSDTSLPDVNDIGSPELTCKDCGAGFQRVDLLRRHVKAAHSYKLEPLDPLDDSVMGEVEGDDNEMWEELEHTCGACGEGFRDALDLLAHAESHARSRNNRCMQCGEKFSDEQSMADHVETAHGPISSYTCTRCGRVCRDKRALMKHTQTQHSTTQLTQQLFCSKCGKSFHNKARLKRHMTSHRDKAVSCNICGESFTDGRSLMNHRHSHSASAARQFPCRECGKTFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDARRGTGAAPFWCAVCGRLLHTSGELVQHLIQHSDANTALKRQPQTGPRKYKRRRKLKPHEVEMFSKVEERNDSENSLPEPEEEEPESVVVVKRRASQGSRRGRKSKVNSTPPKESNYTAMLESIASPKRTEPAVGTSGSARTKGKGRMKREVAQPARPKMIHTQKIKGTSEPAATPTRGRRRCTVASTTTATVTSGSTEERRPRTKNVRYHEPGRPPTATFPPIKMEPDTDIAADLREILRAPSSPLTTATVTTSSRRERSTRRAEAAQSINATPPAALPSTANGVNVANVKLETEELGSFKCEMCSLDFSLRDELLSHVRIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00179673;
90% Identity: -
80% Identity: -