Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388319.1:25580908-25593423[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.2e-05 0.0058 18.4 0.9 1 23 136 158 136 158 0.96

2 15 0.0071 0.79 11.7 2.3 3 23 166 186 164 186 0.97

3 15 0.00017 0.019 16.8 0.1 1 23 303 325 303 325 0.98

4 15 0.46 51 6.0 0.5 2 23 332 354 331 354 0.95

5 15 0.00069 0.075 14.9 0.1 2 23 393 415 392 415 0.94

6 15 0.027 2.9 9.9 0.0 1 23 453 475 453 475 0.95

7 15 0.017 1.9 10.5 0.1 2 23 482 504 482 504 0.96

8 15 0.00015 0.017 17.0 3.4 1 23 510 533 510 533 0.98

9 15 9.9e-05 0.011 17.6 4.6 3 23 544 564 542 564 0.96

10 15 0.00025 0.028 16.3 1.0 2 23 570 591 569 591 0.96

11 15 1.5e-05 0.0016 20.2 0.4 1 23 599 621 599 621 0.98

12 15 0.0012 0.13 14.2 0.2 1 23 627 649 627 649 0.97

13 15 0.00066 0.073 15.0 0.3 1 23 655 677 655 678 0.95

14 15 0.79 87 5.3 0.2 3 23 694 714 693 714 0.97

15 15 0.00011 0.012 17.4 0.3 1 23 983 1005 983 1005 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.2e-05	0.0058	18.4	0.9	1	23	136	158	136	158	0.96
2	15	0.0071	0.79	11.7	2.3	3	23	166	186	164	186	0.97
3	15	0.00017	0.019	16.8	0.1	1	23	303	325	303	325	0.98
4	15	0.46	51	6.0	0.5	2	23	332	354	331	354	0.95
5	15	0.00069	0.075	14.9	0.1	2	23	393	415	392	415	0.94
6	15	0.027	2.9	9.9	0.0	1	23	453	475	453	475	0.95
7	15	0.017	1.9	10.5	0.1	2	23	482	504	482	504	0.96
8	15	0.00015	0.017	17.0	3.4	1	23	510	533	510	533	0.98
9	15	9.9e-05	0.011	17.6	4.6	3	23	544	564	542	564	0.96
10	15	0.00025	0.028	16.3	1.0	2	23	570	591	569	591	0.96
11	15	1.5e-05	0.0016	20.2	0.4	1	23	599	621	599	621	0.98
12	15	0.0012	0.13	14.2	0.2	1	23	627	649	627	649	0.97
13	15	0.00066	0.073	15.0	0.3	1	23	655	677	655	678	0.95
14	15	0.79	87	5.3	0.2	3	23	694	714	693	714	0.97
15	15	0.00011	0.012	17.4	0.3	1	23	983	1005	983	1005	0.99

Sequence Information

Coding Sequence: ATGGAGAACACATTCACGCTGCGATGGGACCACGATCCCAGGTCGCAGGGAGGTGGTATTGTTACAGAGGAGGTGATATGTGATATGGAGACAGTCAATGCTCAGATGGAACATGCAGAAAATCTTAATCCAGAGACCATAATACCAGATGTGGACAGTGAGCAGATGGCTGCAGAGAACCTCATATTCTTGGCACAGGACGTAGGTGATGGTGAGGTGGTGGAGATGGAGTGCCAGGTCACTGAGGAGGTTATTACGGATGACTGGGTGCAGCCGGGAGGACAGGAGAGAGTGGAAGTCCCCTTGGATCAGCTGGTTGTGGTGAGCACAGAACAGTGCAATGAGGAGAATAATATAGATGTGCCATTACCCACAGATCAGGATGAATACACGGCAATGAGACCATATCCGTGTGACTTTTGCTCTCGTCGCTTCCGTAAGAAAGCCAACCTTGTGAATCACATGACAGCCCATCAAAACGACCGTCCGTACGGGTGTAACCTGTGTGGGGCGAGATATGTGAGGCGTTGTGACTTGCTGCACCACCTCAAGGTGCACGCGTATGTGCCGGACGAAGATGAAGAGAGAGACAATGAATATGATTTGCTGAAAGTAAAAGCTGTAGTGAAACGCAAAGCCAGGAGAAGATCACGCCTCTCATCTGAGAATGGTGGGTTGTCTTTCTCATCATCATATTCCTTGGATGCTGAGACCTCAGTGGCGGCACGCACTCAACAGTACGGGGGCCAAGGACAGTTGGTGAACAACAATAACACCATCAATAACTCCGTCACTCCCCCTGCGGGTTCTTCCAGTAGACATGCGCAGTTCAGTGCCCCCGCGTTAGCTCCAGAAATACCAGTTGTAGTCAACAACAGATTCTCTGTAACGGATCCTCGTAGACCTTTTGTCTGTCAGCATTGTGGAGTTGGATTCGCAAGAGAGAAGGCTCTCGCATCTCATGCCAGGATCCACGGTGGTGACTCCCCATTGGAGTGCAGTGTGTGTGGAGAGTTGTGTTGGAGTAGAGAACAGTTGATTGTACACTACAGGAACAAGCATCCACACAGACCTCTGCCCTCCATCTCTACATCAGCGCAAAACTCACTTGACTACTCAGAAGTTATGTCAGATGCATCTCTTCCTGATGTCAACGACATTGGCAGTCCTGAACTGACTTGTAGGGATTGTGGTGCTGGCTTCCAGAGAGCTGATCTGCTCAGGAGACATGTCAAGGCTGCACATAGTTACAAGTTGGAGCCCATGGACCCGTTGGTTGATAATGACACTTCTGTAATGGATGAAGTGGAGGGTGAGGGTGAAGGAGAGGACAATGGCATGTGGGAGGAGCTGGAACACACTTGTGGGGCGTGTGGGGAGGGCTTTAGGGACGCACTGGATCTGCTAGCACATGCGGAGAGTCACGCCAGGAGTAGGAATAACAGGTGTATGCAGTGTGGAGAGAAATTCTCAGACGAGCAATCCATGGCAGACCACGTAGAGACGGCCCACGGCCCCATATCATCGTACACGTGTACTCGCTGCGGGCGTGTGTGCCGGGATAAGAGGGCTCTCTTGAAACATACACAGACACAGCATGCGACACCGCAGCTGACACAACAGCTCTTCTGTTCCAAGTGTGGCAAGAGTTTCCACAATAAAGCCAGATTAAAACGTCACATGACAAGTCATCGTGACAAGGCAGTGTCTTGTAATATCTGCGGGGAGAGCTTCACTGATGGTCGCTCTCTTATGAATCATCGGCATTCTCACTCAGCCTCCGCAGCAAGGCAATTCCCCTGCAGGGAATGCGGCAAGACTTTTGGTTCTCGGTCCAGCCAGCAGATTCATATTCGCATCCACACAGGGGAACGACCTTATGCTTGCAGATTCTGCTGGAAGGCCTTTGCTGATGGTGGCACGCTTAGGAAACATGAACGTATTCACACAGGTGAGAAGCCGTATGCTTGTGCTGTATGTCCTAGAGCTTTCAACCAGCGTGTGGTCCTCAGGGAACATGTCAGATCCCACCACTCTGCACCTGACACTAGGAGGGGGACAGGGGCGGCTCCCTTCTGGTGTGCCGTGTGTGGCCGCCTGCTGCACACCTCAGGAGATCTGGTACAGCATCTCATTCAGCACAGTGATGCCAACACAGCCCTCAAGAGGCAACCCCAGACAGGACCTAGAAAATACAAAAGGCGAAGAAAATTAAAACCACACGAGGTAGAACTCTTCTCCAATCGATTAGAGAAGAACAATGAATCAGAGGTTAGTTTACCTGAGCCGGAGGAGGAGGAGCCCGAGCCTGTAGTACCAAAGAGGAGGGCCTCCCAAGCCAGTAGGAGGGGGAGGAAGAGGAAGGTGAGCACCAGTACACCACCCAAGGAGAACAGTTATACTGCCTTACTGGAGAATATCAGCAGTCCAAAGAAGGTTGAGCCAACAGTTAGTGGAAGTGCCAGGACCAAAGGAAAGGGTAGGGTGAAGAAGGAACCATCCCAGCAGACTCGACCCAAAATGATCCATACACAGAAAGTTAAAGGAACCCAGGAGTCATCTGCCACCCCTACCAGAGGGCGCAGGAGATGTACAGTAGCCTCCACTACCACAGCCACTGTCACCTCGGGCACCACAGAGGAGAGGAGGCCCAGAACCAAGAATGTGCGTTACCATGAACCAGGACGTCCCCCAGCTGCCACATTCCCTGCAATCAAGATGGAGCCAGACACAGACATAGCTGCTGACCTTAGAGAGATACTGCGTGCCCCATCATCACAAATAATCTTAGGTACTATCACCACCAGAAGAGAACGCTCAAAGAGAGGAGAAGTGGCACCACAACCCATTATTGAGACACCTCCCGCTGAGGTGTCAGAACCCAGCCCTTCCAATGGTGTCAACCAAGTTATCAACATCAAATTGGAAACTGTAGAAGAGGGTCCGTTCAAGTGTGAAATGTGTTCTCTGGACTTCACACAGAGGGGCGATCTGTTATCTCACGTCCGCATTCATATTTGA
Protein Sequence: MENTFTLRWDHDPRSQGGGIVTEEVICDMETVNAQMEHAENLNPETIIPDVDSEQMAAENLIFLAQDVGDGEVVEMECQVTEEVITDDWVQPGGQERVEVPLDQLVVVSTEQCNEENNIDVPLPTDQDEYTAMRPYPCDFCSRRFRKKANLVNHMTAHQNDRPYGCNLCGARYVRRCDLLHHLKVHAYVPDEDEERDNEYDLLKVKAVVKRKARRRSRLSSENGGLSFSSSYSLDAETSVAARTQQYGGQGQLVNNNNTINNSVTPPAGSSSRHAQFSAPALAPEIPVVVNNRFSVTDPRRPFVCQHCGVGFAREKALASHARIHGGDSPLECSVCGELCWSREQLIVHYRNKHPHRPLPSISTSAQNSLDYSEVMSDASLPDVNDIGSPELTCRDCGAGFQRADLLRRHVKAAHSYKLEPMDPLVDNDTSVMDEVEGEGEGEDNGMWEELEHTCGACGEGFRDALDLLAHAESHARSRNNRCMQCGEKFSDEQSMADHVETAHGPISSYTCTRCGRVCRDKRALLKHTQTQHATPQLTQQLFCSKCGKSFHNKARLKRHMTSHRDKAVSCNICGESFTDGRSLMNHRHSHSASAARQFPCRECGKTFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDTRRGTGAAPFWCAVCGRLLHTSGDLVQHLIQHSDANTALKRQPQTGPRKYKRRRKLKPHEVELFSNRLEKNNESEVSLPEPEEEEPEPVVPKRRASQASRRGRKRKVSTSTPPKENSYTALLENISSPKKVEPTVSGSARTKGKGRVKKEPSQQTRPKMIHTQKVKGTQESSATPTRGRRRCTVASTTTATVTSGTTEERRPRTKNVRYHEPGRPPAATFPAIKMEPDTDIAADLREILRAPSSQIILGTITTRRERSKRGEVAPQPIIETPPAEVSEPSPSNGVNQVINIKLETVEEGPFKCEMCSLDFTQRGDLLSHVRIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00299333;
90% Identity: -
80% Identity: -