Cdis002227.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceraclea dissimilis
Gene Symbol
-
Assembly
GCA_963576895.1
Location
OY756359.1:16274158-16295580[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.00025 0.011 16.5 0.3 3 23 137 157 136 157 0.97
2 17 4.8e-06 0.00022 21.9 0.7 1 23 163 185 163 185 0.98
3 17 2.4e-06 0.00011 22.9 2.4 1 23 191 213 191 213 0.99
4 17 0.00012 0.0055 17.5 2.7 1 23 228 250 228 250 0.98
5 17 0.0001 0.0046 17.7 1.0 1 23 265 287 265 287 0.98
6 17 1.8e-05 0.00083 20.1 4.1 1 23 302 324 302 324 0.98
7 17 5.5e-07 2.5e-05 24.9 1.6 1 23 339 361 339 361 0.99
8 17 0.00026 0.011 16.5 2.8 1 23 367 389 367 389 0.98
9 17 0.0029 0.13 13.1 1.6 1 23 396 418 396 418 0.99
10 17 1.4e-06 6.2e-05 23.6 3.4 1 23 424 446 424 446 0.99
11 17 0.029 1.3 10.0 1.5 1 23 453 475 453 475 0.99
12 17 4e-06 0.00018 22.2 1.5 1 23 481 503 481 503 0.99
13 17 0.0084 0.38 11.7 0.3 1 23 510 532 510 532 0.98
14 17 1.3e-05 0.00061 20.5 1.2 1 23 538 560 538 560 0.99
15 17 0.0032 0.14 13.0 0.3 1 20 566 585 566 588 0.93
16 17 0.00015 0.0066 17.2 1.7 2 23 595 616 594 616 0.97
17 17 5.7e-06 0.00026 21.7 1.4 1 23 622 645 622 645 0.97

Sequence Information

Coding Sequence
ATGTTCGAGCAGCAGATCAAGTCCGAGCCCATGGGCTTTTACTCATCTCACCCGCACCTACACGGGGCGCCCCCCTCCGTGGTGCGTGGTGATGTCCCCACCTCTCAAGCTCAGGCACACTCGCAGTCTCAGCAGCAGTCGCAGAGTTCGCAGAACCCTCACCAACATCAACACCACCAACTGCAACACCAACAGGACTTGCAGGATCAATTACAGGAACAACAGCAACAAGAAGACAGCAAGGAGAGTCTCATATTACAGCAACATGCTGCTGCAGCTCTTGCACAACATGTACAGCATGCACAAGAACAAGAGCAAGGACAAGGTGTGGGGGCGGTGCAGGGTGGTGCGGGTGCCAAGGTGGAAGCGGGACTGCTGCCTGGGGTAGGCAGGTCCAAGCCCCAGGCCTGCAAGCTCTGCGGGAAGATGCTTTCCTCGCCCTCCTCTTACTATGTGCACATGAAGCTGCACTCGGGGATTAAACCATTCGCATGCACGGTGTGTGACGCAGCATTCTGTCGCAAGCCTTACCTGGAAGTTCACATGCGCACTCACACTGGGGAGAGACCATTCCAGTGTGAAATTTGTTTGAAACGCTTCACACAAAAATCTAGCCTCAACACACACAAGAGGGTACACACAGATGAACACGTTCGGTCCCTGATGCTGAAGGAGCGGCCTCACCAGTGTGACGTGTGCCAGATGAGATTCACACAGAGCTCCAGCCTGGGACGACACAAGAAAATACACACCGAGGAACACAGGCGTGCGCTGCTGGCCAAGGAACGGCCCTACCAATGTGAGATGTGCTTCGTGCGCTTCACGCAGAAGTCCAGCCTGGGACGACACGCCAAAATACACACGGAGGAGCACAGGCAAGCCCTGTTAGAAAAAGTGCGACCATTCCAGTGCCACATCTGTTTCATGAGGTTCACTCAGAAGTCCAGTCTCAACCGCCACGGAAAAGTTCATACCGAAGAGCACATGCGCTCGCTGGTCAACAAGGTGCGTCCGTACAAGTGTGAGGTCTGTGACAAGCGTTTCACTCAGAAGTCCAGCCTGGGCACTCACCGACGTATACACACCGGTGAGCGTCCCTTCCAGTGCACCGTCTGCCTCAAGTCATTCACACAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTCCAGGGCAGGCCCTTCCAGTGCAGTGTGTGCCCAGCGGCGTTCACCTGCAAGCAGTACTTGGAGATACACACGCGCACCCACACAGGGGAGCGGCCATACCAGTGTACCCTCTGTCACAAGGCCTTCGCCCAGAAGTCCACACTCAACGTGCACAAGCGCACGCATTCAGTCCAGGGGCGGCCCTTCCAGTGCACCGCGTGCCCCGCAGCCTTCACCTGCAAGCAGTACCTGGAGATACACACGCGCACCCACACCGGAGAGCGCCCCTACCAGTGTGATGTCTGCCTCAAGAGGTTTGCCCAGAAGTCCACCCTAAACATCCACAAGAGAACCCACACAGTGCAAGGCAGACCATTCCAGTGTGTGCAGTGTCCAGCTGCGTTCACTTGCAAGCCCTACCTGGAGATACATATCCGCATCCACACCGGAGAGCGCCCCTACCAATGTGACCTCTGCCTCAAGAGGTTTGCACAGAAGTCTACACTCAACATACACAAGAGAATACACACAGGGGAGAGACCATATGCTTGTGATATCTGCCAAAAGAGATTTGCTGTCAAGAGTTACGTAACAGCACACAGGTGGTCTCATGTGGCAGAAAAGCCCCTAACTTGTGACAGGTGTACCATGACCTTCACATCTAAAACACAGTTTGCTCTCCATATTCGCACTCATACAGGAGGGCAGTGTTACGAATGCAGTGTTTGTGGCAGGACTTTTGTTAGAGACAGTTATCTTATTAGACATCACAATCGTGTGCATAGAGAAAATCATAGTAATGTGTCTGCTAATAGTATCGCCACCATCAACAGTGTAGCAACCAACACAAATAGCGCCTTTGATTCACCTGGAGTTTGTGAtcttagCTTTGTGCCACTTGTAAATCGGTATATGTCAAGCATGGGTGCAGGTAGCATGACATCTCAAGGCACTCAGGTGTCCTTACAGGATACTCAGCCCAAGAGTCACCCTCTTTCTCCATCATCCATTGGATCTCCACCACCCCCGCACACGCCCACACCAGGACCAGTACCCATGCAGTCTCATACCCCCACCCCCGGGCCCATGCAGGCTCATACACCTACTCCTATGCAGGCCCACACTCCAACTCCTAATCCTATGCAGGCCCATACGCCCACTCCCAATCCCATGCAGGCTCATACGCCCACGCCTCTCCCCATGCAGGCACACACGGCCCCCATACCAATGCAAGCTCATACACAAATTGCCCTGCAACAACCATAA
Protein Sequence
MFEQQIKSEPMGFYSSHPHLHGAPPSVVRGDVPTSQAQAHSQSQQQSQSSQNPHQHQHHQLQHQQDLQDQLQEQQQQEDSKESLILQQHAAAALAQHVQHAQEQEQGQGVGAVQGGAGAKVEAGLLPGVGRSKPQACKLCGKMLSSPSSYYVHMKLHSGIKPFACTVCDAAFCRKPYLEVHMRTHTGERPFQCEICLKRFTQKSSLNTHKRVHTDEHVRSLMLKERPHQCDVCQMRFTQSSSLGRHKKIHTEEHRRALLAKERPYQCEMCFVRFTQKSSLGRHAKIHTEEHRQALLEKVRPFQCHICFMRFTQKSSLNRHGKVHTEEHMRSLVNKVRPYKCEVCDKRFTQKSSLGTHRRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFQCSVCPAAFTCKQYLEIHTRTHTGERPYQCTLCHKAFAQKSTLNVHKRTHSVQGRPFQCTACPAAFTCKQYLEIHTRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPFQCVQCPAAFTCKPYLEIHIRIHTGERPYQCDLCLKRFAQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVAEKPLTCDRCTMTFTSKTQFALHIRTHTGGQCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIATINSVATNTNSAFDSPGVCDLSFVPLVNRYMSSMGAGSMTSQGTQVSLQDTQPKSHPLSPSSIGSPPPPHTPTPGPVPMQSHTPTPGPMQAHTPTPMQAHTPTPNPMQAHTPTPNPMQAHTPTPLPMQAHTAPIPMQAHTQIALQQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01012592;
90% Identity
iTF_01025219;
80% Identity
-