Cdis021660.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- Hr39
- Assembly
- GCA_963576895.1
- Location
- OY756381.1:7597420-7616709[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.27 2.1e+03 -1.8 0.4 38 98 50 110 35 168 0.61 2 4 3 2.4e+04 -18.9 22.9 64 64 347 347 177 484 0.54 3 4 2.2e-12 1.8e-08 34.7 0.1 1 128 547 667 547 692 0.63 4 4 1.4e-70 1.1e-66 226.3 0.0 205 408 691 892 683 892 0.96
Sequence Information
- Coding Sequence
- ATGGCTAGTTCCACCACGGTTAGCAGTGGCACCGGATCCACCTCAGATTTGGCGATCAAAGTGGAGCCGGGGACCAGAAACGTGTCCGTCACTCCAATTAACATGTCGGACAGTCAAGTAGCCAATGGTCAGTTCTCGTACAGCTCCCAGGGGGTCCGCATCAGCGTGCCTTCTCAGGAGCTCCAGAGAGCCCCTCCGCCCCCGCCACCACACCCCCACATGCAAGATGAAGACTCTAACGATGCAGAAGTCTCCAGTATCGATTTCTCACAACATGCTAGTCaggttAATATGCGAACTAAGAAGAAGCGCCCCTCCTCATCCAGTTGTATGACGCCCTCCGGGGACGCCATGACGGGGGGCTCCTGCCCCTCCCCCAACAGGGACAGAGAGAGGCCCATGTCGTGGGAGGGGGAGCTCTCTGACTCGGAGATGCTGGTGGACACGGTACACACGCAGATGGATAGGCAAGGAGACGCAATGCACAGCCCCAGAGACATGAGCAACGGTGGAGAGAGCGAATGCGGAGACAGCACCAGCAGCCGGCAGAGTCTAGTCAGGGAAGATGCCCTCAACCTCAAGTATACTCATCATCAACGAAGTCACAGCATGAATAGGGTATCTGTTTTATCCAACGACATAATCGACGCCAGAAACCCACCGTCACCTCTGTCGCAGCACAAATCACTATCGAGCGAGCACCACCACCTGCAGCAGTCTCCGGGCGTCATGTCGGGCGGTACGCCACCTTCGTCACTGAACAACAACACGTCCAATAGCTCGAATAACAATAACGGGGTCGGTGGTAACCACGCGTCCAGTGGCGTCGAACagactattaaaaatattcctGTCAACATCATTCCGCAGTCGCTGAGTAACAAGATGGCGACGGAGGCTCATGTCTTTGCTTGCAAGAGGGAGATGATGATCGGACAAACGCACTTAACAGACATAAAGCCAGAGCTCCCGCTGATGGTGGACAAGCTCCTGGGGGGCTACTCCCTCCACAGCACCCCCAGCAACTCCCCTCTGCTCAACAGACACCACAAGATCGTCTCCAACCCCAGCACTGATTCCGCACTACATTCCACGTCTGTTTATACTCATAGTGTATACAGCAGTCCATCGGCCAGCCCCGGCGCCACGCGGCACGCTCCCTACACTCCCTCACTCTCCAGGAACAACAGTGATGCCTCACATTCCTCCTGCTACTCCTACACCTCAGAGTTCAGTCCCACACACTCTCCCATACAGGGTCGCCACCTTCCGTCGCACGTGTTATACCGCTCGGAGCACAGCACACTCTCCAGGCAGCAACAGCAGCAGCACTCCCAGTCGCAGTGTACcgagggggaggggggcagcccTGACCCCGAGGGACAGCAGCCCCACCAAGGGGTCAGCCGACAGCAGCTCATTAACAGCCCCTGCCCCATATGCGGAGACAAGATCAGCGGCTTCCACTACGGCATCTTCTCGTGCGAGTCCTGCAAGGGCTTCTTCAAGAGGACCGTGCAGAACAGGAAGAACTACGTGTGCCTCCGGGGGGCCAACTGTCCCGTCACCGTCACCACTAGGAAGAAATGTCCCGCGTGTAGATTTGATAAATGTCTCCACTGTGGAATGAAGTTGGAAGCcatcagagaggacagaacgcggGGCGGCAGATCTACGTACCAGTGCTCCTACACCCTGAGTGGGGCGGCCTCTACCAGCTCGCTGTCTCTCGCCAACACGCCCCTCCAAGTGGGGCCCCTCAGGCACGCCTCCAGTCTAACATCGGTGAATGGCCCCTCATCACACTTGTCGTACAGATCTCACCAGGACCTCCACGCCGCCTCCATGGGCTCCGTGGCACAAATGAAGAGTGAGCAGCAGTCCGCTCTCAATCCAGATCCCATGGGCATCCCACCTTTATTACAGGAAATAATGGATGTGGAGCATCTCTGGCAGTACAACGAATCGGAACTGAATCGAATCAACAAGGGACAACCCCCCTCAGGGGGCGGTTCAGCCTCGTCCCCCCTCTCCAACCCCCTGCTGAGATCCGCCGGCCTTCCAGCAGACTCCAATCCCGACTTCTTAGCCAACCTCTGTAACATAGCGGACCATCGACTGTATAAGATTGTTAAATGGTGCAAGAGCCTGCCGTTATTTAAGAATATATCAATTGACGATCAGATCTGTCTCTTGATCAACAGCTGGTGTGAGCTGCTCATCCTGTCGTGCTGCTACAGGGGGGTCAACACTCCGGGGGAGGTCAGGGTGAGCGGGGGGGCCAGGGGGATCACCCTGCAACAGAGTGCCAAAATGGGTCTAGCACCCTGCATAGAGCGCATGCTCCACTTTACTGACCACCTGCGACGCCTGCGAGTGGACAGATACGAGTATGTCGCCATGAAGGTGATAGTCCTCCTGACCTCCGACACGTCCGAGCTCAAGGAGCCAGAGAAGGTGCGGGCCTCCCAGGAGAAGGCCCTGCAAGCCCTGCAGGCCTACACCCTGGCACACTACCCCGAGACGCCCGCCAAGTTCGGGGAACTGCTTCTCAGGATACCAGAGTTGCAGAGAACTTGTCAGgTTGGAAAGGAAATGCTAAATCCCTCCAACAAATCTAAGGACGGAGAGGCTCCCAGTTTCAACTTACTCATGGAATTACTCCGTGGTGACCACTGA
- Protein Sequence
- MASSTTVSSGTGSTSDLAIKVEPGTRNVSVTPINMSDSQVANGQFSYSSQGVRISVPSQELQRAPPPPPPHPHMQDEDSNDAEVSSIDFSQHASQVNMRTKKKRPSSSSCMTPSGDAMTGGSCPSPNRDRERPMSWEGELSDSEMLVDTVHTQMDRQGDAMHSPRDMSNGGESECGDSTSSRQSLVREDALNLKYTHHQRSHSMNRVSVLSNDIIDARNPPSPLSQHKSLSSEHHHLQQSPGVMSGGTPPSSLNNNTSNSSNNNNGVGGNHASSGVEQTIKNIPVNIIPQSLSNKMATEAHVFACKREMMIGQTHLTDIKPELPLMVDKLLGGYSLHSTPSNSPLLNRHHKIVSNPSTDSALHSTSVYTHSVYSSPSASPGATRHAPYTPSLSRNNSDASHSSCYSYTSEFSPTHSPIQGRHLPSHVLYRSEHSTLSRQQQQQHSQSQCTEGEGGSPDPEGQQPHQGVSRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGANCPVTVTTRKKCPACRFDKCLHCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTSSLSLANTPLQVGPLRHASSLTSVNGPSSHLSYRSHQDLHAASMGSVAQMKSEQQSALNPDPMGIPPLLQEIMDVEHLWQYNESELNRINKGQPPSGGGSASSPLSNPLLRSAGLPADSNPDFLANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLILSCCYRGVNTPGEVRVSGGARGITLQQSAKMGLAPCIERMLHFTDHLRRLRVDRYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQAYTLAHYPETPAKFGELLLRIPELQRTCQVGKEMLNPSNKSKDGEAPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00179517;
- 90% Identity
- iTF_00299197;
- 80% Identity
- iTF_00299197;