Cdis008651.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963576895.1
- Location
- OY756365.1:15510055-15518254[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-103 1.6e-98 330.1 30.4 1 300 119 417 119 417 0.94 2 2 0.052 1.2e+03 -1.1 3.8 9 232 451 485 426 492 0.54
Sequence Information
- Coding Sequence
- ATGGGTGATAAAAGAACTTTGACTAATGGTGTTAGCGACAGTGACAGTGCACATGAGACAAGTGAAAATGAACAGTTTACGGACGGTGATTTCGAAGACTCCGAGGACGATCACACGATAAGggtcgataataataattgtagaaatGTTCCGTGTAACGAAGCTGTGAACAATAGTGTCTGTGCGAAGGATGATGGAGTCCAGCTCAGGGATAAGAGTAAGAAGAGTGTGCCCTCTCCACGTGTGGAGGTCAATGGGGTACACAATGGGAGCGCAGTCCCTCCTCCTCCTTGCAATGGCGATGAGTTGAGCGAGCTGAGCATCGTAGGCATCCTCGGCAAGGATCATGATAGAGCTGAAGCCCGCTTGGCTGCCAGAAGACAGGCACGTGCCGAGGCTCGGGAGATCCGCATGAGAGAGCTGGAAAGGCAGCAGAAGGAGCAGGAAGAAAATGCCGACAAAGTTTATGATATGTACTcggATACAACTCCTCGAATCAGTCGAGGAGCTGTCAGGAGTATATCCACCACTCCGTCTACagccaataattatttatcatcaAGAAGAAGCTCCGAGGATTCCCTTGAAGAAATGGGAAGCATTAGAGATATTAGGGTTGAGTTGAAAGAGGTGGAAGAGAAATTTAGGAAAGCCATGATACTGAATGCTCAATTGGATAATGACAAAGCCTCCTTTTCATATCAATTGGAATTATTAAAAGATAAATTAGAAGATTTACAAGAACAATATACACAATTGCAGAGAGAACATAAAGATAAATGTCGAGCGCACGAGAGCTTATCTAGGGAGTGCCGAGCGACGAGAGAGGAACTACAACGATGCACAGCGGCCCTGCAGCTCAGAGACAGGTGCATCAGGGAGGCGGGATTAGAACTTGTCATATGTGAAGATGATAATAGCGGCACCAAGGTAGATGGCGAAGTTCAAATCAGTGCTGCTCTTGTATCCAGTGCAGGGAAGGAGGCGTTGGAATCAGCTGGCCAGGGTACATTAGACGTAAGATTGCAAACGCTTCACAATGAGAAGCAGAGTTTAGAGAATGAGGTGAAGCACCTGAAGTCCCAACTGGACGACGAGAAATCTAAGAAGAAAAACTTGCACAATTCACACAATGGACCCGTCAACGGATCCGACAGTGATTCCGATTCGTTTGAAACCCaacGTGAGAATTCAAAACTCGTCGCTGACTACAAATTCAGAGCGCAGAAAGCCGAACAGGATGTGCTCACACTTCAGGTTACGGTGGCGAGGTTGGAGAGTCAGGTCCTACGTTACAGAAGCGCCGCAGAACAAGCAGAACGTATTGAGGACGAATTAAAATGCGATAGGCGAAAATTACAGAGAGAGgCGCGAGAGGCTCTCAGTCGAGTGGAAGAATTAGAAACTGAAAATAGTCACTTAAATAAACGTCTGGATAAATTGAAAACTGCCAAGTCGGCGCTTCTCAAGGAACTCTGA
- Protein Sequence
- MGDKRTLTNGVSDSDSAHETSENEQFTDGDFEDSEDDHTIRVDNNNCRNVPCNEAVNNSVCAKDDGVQLRDKSKKSVPSPRVEVNGVHNGSAVPPPPCNGDELSELSIVGILGKDHDRAEARLAARRQARAEAREIRMRELERQQKEQEENADKVYDMYSDTTPRISRGAVRSISTTPSTANNYLSSRRSSEDSLEEMGSIRDIRVELKEVEEKFRKAMILNAQLDNDKASFSYQLELLKDKLEDLQEQYTQLQREHKDKCRAHESLSRECRATREELQRCTAALQLRDRCIREAGLELVICEDDNSGTKVDGEVQISAALVSSAGKEALESAGQGTLDVRLQTLHNEKQSLENEVKHLKSQLDDEKSKKKNLHNSHNGPVNGSDSDSDSFETQRENSKLVADYKFRAQKAEQDVLTLQVTVARLESQVLRYRSAAEQAERIEDELKCDRRKLQREAREALSRVEELETENSHLNKRLDKLKTAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01024952; iTF_00179355;
- 90% Identity
- -
- 80% Identity
- -