Cdis006390.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- -
- Assembly
- GCA_963576895.1
- Location
- OY756363.1:6668423-6677824[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-10 1.1e-05 25.3 0.1 4 99 15 112 13 136 0.74 2 2 3.6e-07 0.0086 15.8 0.1 347 382 135 171 128 182 0.86
Sequence Information
- Coding Sequence
- ATGACTTTGTGTTCAGCCTACACGTATCAAGCAGCTAGCGTGGAGCGAGATAGTCTGCGCGAGAGGCAGCGGCAAGCCCGCGCGCAGATGTCCTCGCAGGGAAGCGACCTCCAGGAGGACCTGTTCAGGCCGCCGGTCAGAGTGAGTCCGGCGGCTAATGATCGTGTTACGCAGCAGATACAAAGTAAACTAGGTGACTTTCGCTACGTGAAGCACTTTCTAGATGATCCCACTTCCTCCATCGGGGTCTATGGGGAACCAGCGAGTCCTGCTCCAGGCGGGCCGTCACGGGGAGGGGAGTTCAAAAAGCCGCACCATGCTTCTGCACAAAATGGTAGACCTGCCCACCGGAATATGCAGTACTTTAGTAAGGGTCTGGGCGAACCCAATGGAGTGCCATCAGTGTCTGTCGAGAATATTCTCAAAGAGATTAAATCAGCCGCCATGCCTCCCCTTACTGCTATGGCGGCGACACCAAGGAAAGAAACGGAATCTAAGTTCAATTTCAATATTGCGATGCAGAAGGTGAATAAATTGTATTCTACATTGTTGGTTCCCTGTTTGTTGTGTGCATTGGAAATAACTTAA
- Protein Sequence
- MTLCSAYTYQAASVERDSLRERQRQARAQMSSQGSDLQEDLFRPPVRVSPAANDRVTQQIQSKLGDFRYVKHFLDDPTSSIGVYGEPASPAPGGPSRGGEFKKPHHASAQNGRPAHRNMQYFSKGLGEPNGVPSVSVENILKEIKSAAMPPLTAMAATPRKETESKFNFNIAMQKVNKLYSTLLVPCLLCALEIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -