Cdis008492.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- -
- Assembly
- GCA_963576895.1
- Location
- OY756365.1:12102845-12104818[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-10 5.5e-07 29.6 0.0 1 37 15 52 15 59 0.90 2 2 4.2 3.9e+03 -2.0 0.2 30 41 520 532 519 533 0.86
Sequence Information
- Coding Sequence
- atggTGAAACATTATAAAAGAATAACAAATAGAGGGGATTGGTCAGAAGAGAGTATGAAAAATGCGGTGGATGCTGTAATAGACGGAAAAATGGGATACATGCTAGCAGCGAAGACATTTTCTGTCCCCCAGACAACGTTAGAAAGAAAGGTCAAGGTTGTTCGTGAAAACATGAAAGGTACTGCTCCTATAATATGTACTCCATTGAAGGTTCCGTTAGGCCCCAAAGGGCAAGTTTTTACTGATGATGAAGAGAAAGAGCTTTGCGACTATATTTTGGATATGGAGAGTCGCCTTTATGGACTTACTACAAAAGACTTAAAGGCAATAGTTTACACCCTAGCtgtgaaaaacaataaacaccATCCTTTCAACATCGAGAAAAAAGAAGCAGGCAAGGACTGGGTTCAAAGGTTTTTAAACAGACACCCCGAACTGTCAATAAGGAAACCAGAAAACACCTCAGCGGCGCGTGCTGCAGGGTTTAACAAAGAAGTTGTCaatcaatttttcatttttttgggaaacGTTTATGATGAACATCACCTAACACCAGATCGTATTTATAACTGCGACGAAACCGGCATTTCAGTTGTGCCTAAAACAAAATCTAAAATTATAGCAAGAAAGGGACGAAAACAAGTAGGATCTTTAACTTCTGCTGAAAGAGGTACTACAATCACAGTGGAAATATGTTTCAGCGCTAGTGGCCATTATATGCCACCTATGATGGTATTTCCTAGGAAAAGAATGGACCCACAACTGATGCTGAATTCTGCACCTGGAGCTTGGGGAGTTTGCAGTGACTCTGGCTggatgacagctgaattattCCTGGGATGGTTTAAAAAGTTCGTGGAATTCAGTGGGGCTACAGTTGATCGACCTGTTTTGTTATTGTTGGATGGACATGCCACCCACACGAAAAACATTGATCTGATAAATGAAGCTCGACTCCATGGtgctattattttatgttttccaCCACACACTACTCATCGTCTTCAGGTCGCTGATGTTGCTTACATGAGACCATTAAGCATTTATTACGATCATCAAATCACAGTGTGGCTCCGTAGCAACCCAGGAATGATTGTTACAGTCCGGCAAGTTGCCGAAATTTTCGGAAAAACCTTTATACAGGCGTCTACGATGTCAACAGCTGTTAATGGCTTTAAGAAATGTGGAATATGGCCATATGATCCTACAGTTTTTTCTGAAAGTGACTTTGCGCCTTCTTTGACCACAGATATTCCGCGAACTGAGAATTTGCCAGTCTCTGAAATACTAAATGCAGCCAATAGAACACAAACCATCGAACTTTGCACTGTAACAGCACCTTCGGTGAATTCTACTGAATTGATACCAATATCCACTGAAACAGCACCGAACAGCCAATCCGTGCCACCTATCTCAATTCCTGGAGCCTTATCGACCTCTGAGCCGGGTTGTTCTACATGGGTTGACAATACAGAAATATACAAAAGGTCAATTACTCCAgtgaaatcatttttttctcatACCAGTCCGCAGCAAGTAATGGCTTTTCCAACGAATCGCAAAACTTTACGCGTGACTAGAAAAAGAGGAAAAACCGCCATTATTACATCGTCACCATACAAAAATGAATTGGAAGAGacgattaaaaaaaagaaacttatAGAAGAGGGTAaacagaaaagaaaagaaacgaGAGAGTTAAAGAAAACTCAAAAAAAgactgaagtaaaaaaaaaaaatatagccaAGAAGAAAAAAGTAGCTGAACCCAGATCATCACCGGAAAACAGTGACAACGATACTGACAATACCCCTTGTTTGTACTGCAATGGTCGTTATTTGGACTCAAATGAAGGTTGGGCTGCGTGTTCTGGATGCGGAAAATGGGCTCACTGCAGCTGTGCTGGTGTGGATGATGAAGATGACGAGGCAGCATTTACGTGCAAATTTTgtcaagaaaaaaatgtaggttaa
- Protein Sequence
- MVKHYKRITNRGDWSEESMKNAVDAVIDGKMGYMLAAKTFSVPQTTLERKVKVVRENMKGTAPIICTPLKVPLGPKGQVFTDDEEKELCDYILDMESRLYGLTTKDLKAIVYTLAVKNNKHHPFNIEKKEAGKDWVQRFLNRHPELSIRKPENTSAARAAGFNKEVVNQFFIFLGNVYDEHHLTPDRIYNCDETGISVVPKTKSKIIARKGRKQVGSLTSAERGTTITVEICFSASGHYMPPMMVFPRKRMDPQLMLNSAPGAWGVCSDSGWMTAELFLGWFKKFVEFSGATVDRPVLLLLDGHATHTKNIDLINEARLHGAIILCFPPHTTHRLQVADVAYMRPLSIYYDHQITVWLRSNPGMIVTVRQVAEIFGKTFIQASTMSTAVNGFKKCGIWPYDPTVFSESDFAPSLTTDIPRTENLPVSEILNAANRTQTIELCTVTAPSVNSTELIPISTETAPNSQSVPPISIPGALSTSEPGCSTWVDNTEIYKRSITPVKSFFSHTSPQQVMAFPTNRKTLRVTRKRGKTAIITSSPYKNELEETIKKKKLIEEGKQKRKETRELKKTQKKTEVKKKNIAKKKKVAEPRSSPENSDNDTDNTPCLYCNGRYLDSNEGWAACSGCGKWAHCSCAGVDDEDDEAAFTCKFCQEKNVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00298984; iTF_00298980; iTF_00298982; iTF_00298985; iTF_01012177; iTF_01012176;
- 90% Identity
- iTF_00298984;
- 80% Identity
- -