Cdis010981.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- ttk
- Assembly
- GCA_963576895.1
- Location
- OY756368.1:5403077-5406127[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-16 2.6e-13 49.8 0.0 1 42 373 415 373 418 0.95 2 2 0.69 6.6e+02 0.5 0.0 25 34 494 503 493 503 0.89
Sequence Information
- Coding Sequence
- ATGACGGTGCAACAATTCTGTCTGAGGTGGAACAATCATCAACCGAATTTCATATCGGTTTTTACATCTCTGTTGAATAATGAGACTCTAGTTGATGTGACGTTAGCTGCCGAGGGTAAACATCTTCAAGCGCATAAGGTCGTCTTATCGGCATGTAGTACTTACTTTCAGTCTCTCTTTACGGCGAATCCCTCAAGGCATCCGATAGTTATCTTAAAAGATGTGAAACACTCTGATCTCAAGATCCTGGTGCACTTCATGTATTATGGTGAAGTCAACGTGTCGCAGGATCAGCTCCCGCAGATCTTGGACGCGGCGAGGATGCTCAAGATCAAAGGTCTTACGGAGATGTCCGAGCCCTCGGGTAGCGGTAACAGCAATGCTGTGAATGCCACGGAGCGGCCCAATCTTCTGACGCCTGGGGAATCTTCGTGGCACTCGGATGCACAACCTCATCATGACTTGTCACCGCATCATTCACTGTCTCCGACCAGTAGGAGGAAGAAATCTCGTAAACACTCTAGGTCTCCGTCTCGCGAGAGAACCGTCGAACCCCAGACAGAACAAAACAATTTGACAGCTGTGCGTAGTAGTACAGAGCCTACCAATTTCACGACCTCAGCGCCTACCAATCTTTTTTGCGCAAAATCTAGAATGACCGAACAGCAAACGAACGACTATAACACATCTAAAGACAGCTTTGACGAAAGTGGACCAATCGAAGGAAATCTTATTATTGACGCAGACGAAGAACACAAggagtataatataattagggTGTCTGATCCAATGACTGAAACTCAAAGTATTCCATCAACCCCTCAACAAGGCCCTCAGTGGTCCGGCATGGACGGAACTTATCAAAGATATTCAACACCTCCATTTCATTCTAACAACGTTCACAACATTCCACCGTTCAACATGAATACATTTCATTCCCAGGAATTACCATTCGGAATGCAGGGAATGATAAACCCATACGAATATCCCAACGCATCACAGAATCAATCTCAAAATACCGAAGTAGTGAGAACGTCGCCCGGTCCGTCGTGTTTGAATCCGGGACAACAAGATAATCAGTCTGCGCCTAAACGACGTCGTACTACCAACCCGCAATCTGAAGAAAATTTTCAACAGGCGCTCGAAGCCGTGAGAGTGGGGGGGATAGGGTTTTGTAAGGCTGCTAGAATGTTTGGTGTAAATAATAGAACACTGTGGTTGGAGTATAAAAAGAAAGGTTACCCAAATAATAGACCTAGTATTAAAAGTCGTATAAAGCAAGAACATTCCTCCCCCCCTCCAGACGAAAATCCACCGGCGATACCGGACCAACAGTTGACGCTCCTGTGTCAACCACATCCCGTTAGTATGATGGGTTTCATTGATCCGCGACCCGTGGATTTTACGTCTGGAATTCAAAACGTGAACCGTCCAAGATTCGTTGATGATCCAATGAACTTACACAATTCTCCTTTGAATCTTCACGGCATCAACTTCAATACGTTGCAGTGA
- Protein Sequence
- MTVQQFCLRWNNHQPNFISVFTSLLNNETLVDVTLAAEGKHLQAHKVVLSACSTYFQSLFTANPSRHPIVILKDVKHSDLKILVHFMYYGEVNVSQDQLPQILDAARMLKIKGLTEMSEPSGSGNSNAVNATERPNLLTPGESSWHSDAQPHHDLSPHHSLSPTSRRKKSRKHSRSPSRERTVEPQTEQNNLTAVRSSTEPTNFTTSAPTNLFCAKSRMTEQQTNDYNTSKDSFDESGPIEGNLIIDADEEHKEYNIIRVSDPMTETQSIPSTPQQGPQWSGMDGTYQRYSTPPFHSNNVHNIPPFNMNTFHSQELPFGMQGMINPYEYPNASQNQSQNTEVVRTSPGPSCLNPGQQDNQSAPKRRRTTNPQSEENFQQALEAVRVGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKQEHSSPPPDENPPAIPDQQLTLLCQPHPVSMMGFIDPRPVDFTSGIQNVNRPRFVDDPMNLHNSPLNLHGINFNTLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00179069;
- 90% Identity
- iTF_00299223;
- 80% Identity
- iTF_00299223;