Acin037321.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- -
- Assembly
- GCA_947579605.1
- Location
- OX388329.1:23116670-23119622[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-16 1.6e-13 51.6 0.0 1 42 288 330 288 333 0.95 2 2 1.8 3.7e+02 2.4 0.0 25 34 409 418 408 418 0.89
Sequence Information
- Coding Sequence
- atgtactacggagaggttaacgtgtctcaagaccaattgcctcaaattttggacgcagcgaggatgctcaagattaagggattaactgagatgTCCGAGCCAACATCTAATGCTAATAGTAACCCAGTAAATACGACCGAGCGACCCAATCTACTGACTCCTGGCGAATCCTCTTGGCACTCTGATGCACAACCACATCATGAACTGTCTCCGCATCATTCTCTTTCACCATCTAGTAGGAGGAAGAAAAATCGCAAGCCATCTAGATCTCCATCTCAAGAAAGAACAACTGAGCCTCCTCAAGAACAGGCAAATGTACCAGCCATACGACCAGAGCCAACTAACTTTACAAACTCCGCACCTAGCAACCCATTTTGTTCCAAATCTAGAGTGACCGAACAACAGGCAAACGACTACAATACATCCAAGGACAGTTTTGACGAAAGCGGACCAATGGAAGGGAATCTCATTATTGATGCTGATGAAGAACAAAACGATTGCAACATTATCCGAGTTTCCAACGATCCAATGGCAGAGACACAAAGCGTGCCATCAACTCCACAGCAGGGCTCTCAGTGGTCTGGTATGGATGGATCATACCAGCGCTACTCTACACCACCATTCCATTCAAACAACGTTCACAACATCCCGCCATTCAACATGAATACATTTCACTCACAAGAAATACCATTTGGAATGCAGGGAATGATAAATCCATACGAATATCCTAACACATCGCAGAATCAATCGCAAAGTACTGAAGTAATGAGAACATCTCCCGGACCATCTTGTTCAAACCCGACACCACAAGACAATCAGGCTTCATCAGCTCCAAAACGACGTCGTACAACAAACCCTCAGTCTGAAGAGAATTTTCAACAAGCTTTAGAGGCTGTGAGAGTTGGAGGTATAGGTTTTTGTAAGGCAGCTAGAATGTATGGTGTTAATAATAGAACACTGTGGTTGGAATATAAGAAAAAAGGGTATCCAAATAACAGACCAAGTATCAAAAGTCGTATAAAACAAGAACATTCATCTCCACCACCTGATGAAAATCCACCTGCCATTCCAGATCAGCAACTAACTCTTCTATGTCAACCTCATCCTGTTAGTATGATGAACTTTATAGATGCACGCCCCGTGGATTTCACATCCGGGATACAGAACGTCAACCGTCCAAGATTTATAGATGATCCTATGAACTTGCATAATTCTCCTCTCAATCTCCATGGAATAAACTTTAGCACATTGCAGTGA
- Protein Sequence
- MYYGEVNVSQDQLPQILDAARMLKIKGLTEMSEPTSNANSNPVNTTERPNLLTPGESSWHSDAQPHHELSPHHSLSPSSRRKKNRKPSRSPSQERTTEPPQEQANVPAIRPEPTNFTNSAPSNPFCSKSRVTEQQANDYNTSKDSFDESGPMEGNLIIDADEEQNDCNIIRVSNDPMAETQSVPSTPQQGSQWSGMDGSYQRYSTPPFHSNNVHNIPPFNMNTFHSQEIPFGMQGMINPYEYPNTSQNQSQSTEVMRTSPGPSCSNPTPQDNQASSAPKRRRTTNPQSEENFQQALEAVRVGGIGFCKAARMYGVNNRTLWLEYKKKGYPNNRPSIKSRIKQEHSSPPPDENPPAIPDQQLTLLCQPHPVSMMNFIDARPVDFTSGIQNVNRPRFIDDPMNLHNSPLNLHGINFSTLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01025142; iTF_01024771; iTF_00298969; iTF_00299223;
- 90% Identity
- -
- 80% Identity
- -