Basic Information

Insect: Cephus sareptanus
Gene Symbol: -
Assembly: GCA_030142515.1
Location: JARQTD010000415.1:1173954-1177421[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.026 2 9.2 4.3 2 23 295 317 294 317 0.96

2 13 2.3e-05 0.0017 18.9 2.1 1 23 323 345 323 345 0.98

3 13 0.00068 0.052 14.2 2.8 1 23 351 373 351 373 0.97

4 13 2.2e-06 0.00017 22.1 2.1 1 23 379 401 379 401 0.99

5 13 0.16 12 6.7 0.0 1 13 412 424 412 431 0.89

6 13 2 1.6e+02 3.3 5.0 1 20 454 473 454 476 0.94

7 13 0.0063 0.49 11.2 0.1 1 23 482 504 482 504 0.95

8 13 0.00054 0.042 14.5 0.2 2 21 552 571 551 572 0.93

9 13 0.16 12 6.8 0.2 2 23 580 601 579 601 0.94

10 13 1.4e-07 1.1e-05 25.8 1.2 1 23 611 633 611 633 0.99

11 13 0.0039 0.3 11.8 0.4 1 23 639 661 639 661 0.98

12 13 0.00035 0.027 15.1 0.7 1 23 667 689 667 689 0.98

13 13 0.00062 0.048 14.3 2.5 1 23 695 718 695 718 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.026	2	9.2	4.3	2	23	295	317	294	317	0.96
2	13	2.3e-05	0.0017	18.9	2.1	1	23	323	345	323	345	0.98
3	13	0.00068	0.052	14.2	2.8	1	23	351	373	351	373	0.97
4	13	2.2e-06	0.00017	22.1	2.1	1	23	379	401	379	401	0.99
5	13	0.16	12	6.7	0.0	1	13	412	424	412	431	0.89
6	13	2	1.6e+02	3.3	5.0	1	20	454	473	454	476	0.94
7	13	0.0063	0.49	11.2	0.1	1	23	482	504	482	504	0.95
8	13	0.00054	0.042	14.5	0.2	2	21	552	571	551	572	0.93
9	13	0.16	12	6.8	0.2	2	23	580	601	579	601	0.94
10	13	1.4e-07	1.1e-05	25.8	1.2	1	23	611	633	611	633	0.99
11	13	0.0039	0.3	11.8	0.4	1	23	639	661	639	661	0.98
12	13	0.00035	0.027	15.1	0.7	1	23	667	689	667	689	0.98
13	13	0.00062	0.048	14.3	2.5	1	23	695	718	695	718	0.98

Sequence Information

Coding Sequence: ATGAATGCCTTAATAGAAGATTCACATGGCGAATTAATCACTATATCCATTCAAGAAACAGACACATTCCGGGAGCTAaataaacgaattaaaaaagaatatggaTTACAAATGGACTTTACCAATTTACATGGCTATAGCAGTATTGATTTAGATGAGAATATTCTTGCTTCTCTGTCAAAAAATGATCAATTAGTTTCAATAAATACAGACACATCCTTTTCAAATCACACTGAAAATGTCATAGAAGAATCTATAGATGAAGAATGCATCTTGAAAGTACAACCTGATGAAGCTAATGTGGTTGTTTATGCGAATGACATAGACATACATGCAACTTCAGAAAATGATGAAGCTATTGAAATGCATAAAAGTTATCAGCTCATAACATTGGATTCAGGAATAGAACTTGATCAGCAggtgttaattaattctacaGACGAGAATGTTTTTCTTCATGCAGACGATTCGGAAATCACAGAATTAATGAGTTtaggaaataataaacgatCATTCTCTAAAGATACAATACAAACAAATACTAaagtaattttagaaattactAATGATGTGGCTTCACCTTTATGTCGACTTTGTGCCAATAAAAGTGATGAaatggtatatatttttggaacaACTGAATCAAAAACGGAAATAGcagaaaaaattgatgattgCCTTCCCATTACAGTGAGCAAGATGGATACCCTTCCAAAACAAGTGTGTCATTCATGTTTAGAGAAACTTGAGATGtgttatgaatttcataaaactgTAGTAGAAGCAGAAGCAAGTTTTGTCAAAATGGATTATGGAAAATTGATGCAAACAAGAATTACGAGAAAAACTTGTCCACTTTGCAGACAAAAAGCAAGGCCATGTTATTGTGACAAATGTGATAAATTCATGGTATCTGAGTCATCTCTATACCATCATTTAAAAACAGTTCATTTGCAGTACAAAGAGTTTTGTTGTGACATCTGTGGCAAGCAGTTCAGAGCACAAGCACAATTGGACTCCCATCAAAGAAAGCACAAAGATGAGCGACCGTTCGAATGTACAATATGCAAAAAGCGCTTCTactctaatgaaattttgaaaaggcaCAAAAAGTTACATCTTCCTGATAAACCTTATCAATGCGATCAATGCGGCAAGCGATTTGACAGAACGAACACATTGACCAAGCATCTTCTGAGACACCAAGTAGAAGCAGGCAGATCAATGACATGTTACGTGTGCACAGGATGCAATGAAGTTTTTATCGATTCACTCAGTGGAAATTTGCACATTGATAATTGTATCCTGacaaataatggaaaaaatagtataatagAAGAAAGAACTTTAACGGCCATGTACAGATGCGAGTTTTGTGAAAGATgctatatagatattaaatacatgaaaatgCACCGAGCTTGCCATACCGGACCGCAACCATACGTATGCACCATATGCGACATAACATACGCAACATATAATCAAGCAACAGCACACAAGTCTGCACACAAAAAATCCTCAAAGGAAGTAAACGTCAAGGAAGATGTAGTAAtcccaaaatatttttcatgcgaATGCTGCAATAAGCAATTCCTTCACTTCACCAATATGAATATCCACAGAAAAGCGTGTGCCAGTGGTAAAAACTGGACTTGTCGATATTGTGgctttgtttttgaaaatgccaAAGAGCTTTCAAGGCAcaagaaaggaaaagacaaCGAGGAAACATGGCCTTGCGAGAGCTGCAATATGACATTTGGATCTATCTGTGCACTTGAAATACATAAAGAGATTCACACAAAAGCTTATGCAAATAGAAAACTCTTTAAATGTCTCTACTGTGGAAAAGAGTTTGTTCAGAAAACGCAATTGACCATTCATATAAGAAGCCATACTGGTGAAAGACCTTATGCTTGTGACTTGTGTGACAAGGCGTATAAAATCAAAGCTGAACGGGATAATCATCGTAGAACTCATACAGGCATACGACCTTATAAATGTAATCTTTGTGAACGCGCCTTTAAAAAGGCCAACGCGAGAAAGGTACACATGACCATTCATACGGGAGAGAAACCTTATCAATGTGATGTGTGTAGTACATATTTTAGAAGAATGGGTGATATGCGAAAACACAAAAAAACTCAGCATGGAGTTCAtgaaacaatagaaaatagCAGCGgcttattgaaaattgattaa
Protein Sequence: MNALIEDSHGELITISIQETDTFRELNKRIKKEYGLQMDFTNLHGYSSIDLDENILASLSKNDQLVSINTDTSFSNHTENVIEESIDEECILKVQPDEANVVVYANDIDIHATSENDEAIEMHKSYQLITLDSGIELDQQVLINSTDENVFLHADDSEITELMSLGNNKRSFSKDTIQTNTKVILEITNDVASPLCRLCANKSDEMVYIFGTTESKTEIAEKIDDCLPITVSKMDTLPKQVCHSCLEKLEMCYEFHKTVVEAEASFVKMDYGKLMQTRITRKTCPLCRQKARPCYCDKCDKFMVSESSLYHHLKTVHLQYKEFCCDICGKQFRAQAQLDSHQRKHKDERPFECTICKKRFYSNEILKRHKKLHLPDKPYQCDQCGKRFDRTNTLTKHLLRHQVEAGRSMTCYVCTGCNEVFIDSLSGNLHIDNCILTNNGKNSIIEERTLTAMYRCEFCERCYIDIKYMKMHRACHTGPQPYVCTICDITYATYNQATAHKSAHKKSSKEVNVKEDVVIPKYFSCECCNKQFLHFTNMNIHRKACASGKNWTCRYCGFVFENAKELSRHKKGKDNEETWPCESCNMTFGSICALEIHKEIHTKAYANRKLFKCLYCGKEFVQKTQLTIHIRSHTGERPYACDLCDKAYKIKAERDNHRRTHTGIRPYKCNLCERAFKKANARKVHMTIHTGEKPYQCDVCSTYFRRMGDMRKHKKTQHGVHETIENSSGLLKID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00294715;
90% Identity: iTF_00294715;
80% Identity: -