Basic Information

Gene Symbol
NCOR1
Assembly
GCA_030142515.1
Location
JARQTD010000540.1:3364673-3372377[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-08 1.8e-05 24.9 0.0 3 43 569 609 568 612 0.96

Sequence Information

Coding Sequence
ATGCAAACAGCATTATGTGCTGTTCCTGTAATAGGTTATAGGCCGACACAGAATTACAGCAGTATAAAAAGCAGCAGCCCCGTATCACCCAGGACAGTTGGGGGTTCATACGTGCAAGGGGGCTCTGGTGCCCCATCTGCTGGTGGTGCGGTGGGTCCGCCAGGTAGCGGTAGTAGCGCCGGCGCCACGGGTGGCGCTGGTGCTGCCGGAGGTGGGTACGTCGCTGTTCCGGTTCCTGGAGGTCTGCGATACGTCCATCCGTAtcccccaccaccaccatcggCACCATCCGCACCAATAAACCAAACGCCACCCCCACCAGGTGCCGCGGCGGCCTACACTAGAGACGCCTATCGGAACGCCACCTCAAACATAAATGAAAGGGTCGCCATCAGCGTCAGTAGCAGTCCCGTGTCGCAGGTGGGCGTCGGGGTCGGGGTCGGCGTTGGGGTCGGTGTTGGGGCTGGCGAATACGTGGTTAGCAGCAGAGGTGACCGACCACGAATATCATTGCTTCCACCTTCCTCGGTAGCTCCTGCACCCTCGCCAACGGCGCCCGACTATCACACTTCTGGTGTAAGGAATCCACGAGGCCTCATGCCCATGCAGCCGGATCAGTACTGCAACCGGCCCATGGAGATGGCTAACGTCCAGGAGACACCGCCCTTCAAGAAGATCCGTCTTGGTCAGCCTCAGTCCCAATCCACGTGTCAGACCCTCTCGTCTGCTGAAACGTGCGTCAAGCAAGAGCATGTGCAGCTGCAACAACCTCTCAGGATAGATACGAGGGAGCAGCCTGCAGCAGGTGCATATACACCACAGACGGAAGCAATCTCTCCAACACTGCCCGAGCCAAGTACGCAGGAGGATGCGCAGTTCAGGAGTAATAAGGATGATTTGCTGCAGCAGATATCCAAGGTCGACAGAGAGATCGCCAAAAGGGAATCCCAGATCAGTAAGTTACGTAAGAAGCTTAAGGAGCTGGAGGAGACTGCGAATAAGCCACTGGAGGCCACTGGACTGAAAGTGGAGGAACAGTCCCAGCAGCCGAAGCATCAGTCTCTGGCACAGAAGATCTATGCAGAGAATAGGAAAAAGGCAGAAGAGGCTCATCGTCTCTTGGATAGGTTAGGACCGAAGGTGGAACTACCATTGTATAACCAGCCTTCGGACACTACTGTATACCAGGAGAACCGAACAAGGCATCAAAGCTGCATGCGAGCTAGGCTAGTAGCACGACTAAGACGAGAACATGCAGATCGTGCATCTTTGCATCGGCAGCAGTCCCAGACGTACGCGATTTTGGTGCAGGAATGGCATAGGAAGGTCGAAAGACTGGAGGCAAcgcaaaaaagaaagtcaaaggAGAGCAAGAACCGTGAGTTCTTCGAAAAAGTATTTCCTGAGCTGCGTAAGCAGCGAGAGGATAAAGAACGGTTCAACAGGGTCGGTGCTCGTATCAAGAGTGAGGCTGACCTCGAAGAAATCATGGATGGTCTCCAGGAGCAGGAGGAAGAAATGTCGACCgagttaaaaaattccattaaagCTCGTCAGATGGAGGACAAGAAGATGCGTTCATACGCAGTAATTCCGCCATTGCTGCTGGACACCAAGCAACGAAGGATTGCCTTTCAAAATAGAAATGGTTTACTACAGCCTGAGGAACTCGAAGCTTTACACAGTGAACGAAAGCTCATAAATGTCTGGAGTTCGATGGAGCACGAGCTTTTCAAGGAAAAGTACCTTCAGCATCCCAAGAATTTCGGTGCGATAGCCCAATCGCTTGAGCATAAATCTGTGCCCGACTGTGTGCATCACTACTACCTCACTAAGAAAGCCGAGAACTATAAGCAACTTTTGCGAAAGTCACGGCAGAGGACGCGAAGTTCTCGAAATAATCCTAACAATAaggtgaACAACAGTAACTCCACTATCGGgcctatagatatattgacGACGGGAGTGACGACGAGGCTGCAGCGCGAGCAACAGCAAAAGACGCAGGAAAATCCTCAGAATAATTCTCTAACAACTGATACGACATCCACGACATCTTCTACAACGACAACGACGACCAGTAGCGCCGCGACGACAGTCGTCGCTACCTCGTCCACCTCGAGCGCCAAGGACGCGCGCGAGGcgaataaggaaaataaagagaataaaggaGATTCTAAAGATTCGTCGCACGTAAAGGATATTAAAGAGGAATCACAATCAAGTTCGGAAACTGCTTCGGGAAAGGATATGAAAGTCACCATGGATGCCAAGGGTACTTTGTCCTCGTCGATAAACACCAGCACGACAAACTCCACGACGGTTACGTCGGATTcgaaggataagaaaaaaagcagtGGTGCTGCTACCGGTACCAGTGCTTCAGGTAGAGCCAAGgacaagaaaaaggagaacCATACGACTCCTATGGAGACCAGCGACGAGGAGGCACAGTCCATAGAAACTATTGTTCTCTGGAGCAAAGAAAGAACTCGAGGTTCCACATGTTCTGGTGAAGTCACTTTACGCTTAGAACATCAAGACGAAGTATGTATCCCTTGGCCTTATGTTATGGAGTCATTCACGGCCGAGAGAATGGGAGAAATATTGAATGAGACCTAG
Protein Sequence
MQTALCAVPVIGYRPTQNYSSIKSSSPVSPRTVGGSYVQGGSGAPSAGGAVGPPGSGSSAGATGGAGAAGGGYVAVPVPGGLRYVHPYPPPPPSAPSAPINQTPPPPGAAAAYTRDAYRNATSNINERVAISVSSSPVSQVGVGVGVGVGVGVGAGEYVVSSRGDRPRISLLPPSSVAPAPSPTAPDYHTSGVRNPRGLMPMQPDQYCNRPMEMANVQETPPFKKIRLGQPQSQSTCQTLSSAETCVKQEHVQLQQPLRIDTREQPAAGAYTPQTEAISPTLPEPSTQEDAQFRSNKDDLLQQISKVDREIAKRESQISKLRKKLKELEETANKPLEATGLKVEEQSQQPKHQSLAQKIYAENRKKAEEAHRLLDRLGPKVELPLYNQPSDTTVYQENRTRHQSCMRARLVARLRREHADRASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKESKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEEMSTELKNSIKARQMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSMEHELFKEKYLQHPKNFGAIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQNNSLTTDTTSTTSSTTTTTTSSAATTVVATSSTSSAKDAREANKENKENKGDSKDSSHVKDIKEESQSSSETASGKDMKVTMDAKGTLSSSINTSTTNSTTVTSDSKDKKKSSGAATGTSASGRAKDKKKENHTTPMETSDEEAQSIETIVLWSKERTRGSTCSGEVTLRLEHQDEVCIPWPYVMESFTAERMGEILNET