Basic Information

Gene Symbol
NCOR1
Assembly
GCA_030142455.1
Location
JARQTB010000536.1:3385055-3402325[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-08 1.9e-05 24.8 0.0 3 43 638 678 637 681 0.96

Sequence Information

Coding Sequence
ATGGAGACAGTGGGCAAGCAAGTCCAGGTAGTGAGTGGACTGGGGGTGGGGGGTCCCGTGGGCCCGGTGGGCCCAGTGGGGGGAGAGCTGCATCGGCATCaccacccccacccccacgAGGGCCATGGCCACTCGCTAGTAACTACGGCTACCCCCACCAGAGGTCAGGCCCAATCGCATCAACCGCAGCCACCACCCCCACATAACCAGCACCTTCCAGCGAGGTCTACCCCTGTTCAGCTGCATAGGCCGACACAGAATTACAGCAGTATAAAAAGCAGCAGCCCCGTATCACCCAGGACAGTTGGGGGTTCATACGTGCAAGGGGGCTCTGGTGCCCCATCTGCTGGTGGTGCGGTGGGTCCGCCAGGTAGCGGTAGTAGCGCCGGCGCCACGGGTGGCGCTGGTGCTGCCGGAGGTGGGTACGTCGCTGTTCCGGTTCCTGGAGGTCTGCGATACGTCCATCCGTAtcccccaccaccaccatcggCACCATCCGCACCAATAAACCAAACGCCACCCCCACCAGGTGCCGCGGCGGCCTACACTAGAGACGCCTATCGGAACGCCACCTCAAACATAAATGAAAGGGTCGCCATCAGCGTCAGTAGCAGTCCCGTGTCGCAGGTGGGCGTCGGGGTCGGGGTCGGCGTTGGGGTCGGTGTTGGGGCTGGCGAATACGTGGTTAGCAGCAGAGGTGACCGACCACGAATATCATTGCTTCCACCTTCCTCGGTAGCTCCTGCACCCTCGCCAACGGCGCCCGACTATCACACTTCTGGTGTAAGGAATCCACGAGGCCTCATGCCCATGCAGCCGGATCAGTACTGCAACCGGCCCATGGAGATGACTAACGTCCAGGAGACACCGCCCTTCAAGAAGATCCGTCTTGGTCAGCCTCAGTCCCAATCCACGTGTCAGACCCTCTCGTCTGCTGAAACTTGCGTCAAGCAAGAGCATGTGCAGCTGCAACAACCTCTCAGGATAGATACGAGGGAGCAGCCTGCAGCAGGTGCATATACACCACAGACGGAAGCAATCTCTCCAACACTGCCCGAGCCAAGTACGCAGGAGGATGCGCAGTTCAGGAGTAATAAGGATGATTTGCTGCAGCAGATATCCAAGGTCGACAGAGAGATCGCCAAAAGGGAATCCCAGATCAGTAAGTTACGTAAGAAGCTTAAGGAGCTGGAGGAGACTGCGAATAAGCCACTGGAGGCCACTGGACTGAAAGTGGAGGAACAGTCCCAGCAGCCAAAGCATCAGTCTCTGGCACAGAAGATCTATGCAGAGAATAGGAAAAAGGCAGAAGAGGCTCATCGTCTCTTGGATAGGTTAGGACCGAAGGTGGAACTACCTTTGTATAACCAGCCTTCGGACACTACTGTATACCAGGAGAACCGAACAAGGCATCAAAGCTGCATGCGAGCTAGGCTAGTGGCACGACTAAGACGAGAACATGCAGATCGTGCGTCTTTGCATCGGCAACAGTCCCAGACGTACGCGATTTTGGTGCAGGAATGGCATAGGAAGGTCGAAAGACTGGAGGCAAcgcaaaaaagaaagtcaaaggAGAGCAAGAACCGTGAGTTcttcgaaaaagtatttcctGAGCTGCGTAAGCAGCGAGAGGATAAAGAACGGTTCAACAGGGTCGGTGCTCGTATCAAGAGTGAGGCTGACCTCGAAGAAATCATGGATGGTCTCCAGGAGCAGGAGGAAGAAATGTCGACCgagttaaaaaattccattaaagCTCGTCAGATGGAGGACAAGAAGATGCGTTCATACGCAGTAATTCCGCCATTGCTGCTGGACACCAAGCAACGAAGGATTGCCTTTCAAAATAGAAATGGTTTACTACAGCCTGAGGAACTCGAAGCTTTACACAGTGAACGAAAGCTCATAAATGTCTGGAGTTCGATGGAGCACGAGCTTTTCAAGGAAAAGTACCTTCAGCATCCCAAGAATTTCGGTGCGATAGCCCAATCGCTTGAGCATAAATCTGTGCCCGACTGTGTGCATCACTACTACCTCACTAAGAAAGCCGAGAACTATAAGCAACTTTTGCGAAAGTCACGGCAGAGGACGCGAAGTTCTCGAAATAATCCTAACAATAaggtgaACAACAGTAACTCCACTATCGGgcctatagatatattgaCGACGGGAGTGACGACGAGGCTGCAGCGCGAGCAGCAGCAAAAGACGCAGGAAAATCCTCAGAATAATTCTCTAACAACTGATACGACATCCACGACATCTTCTACAACGACAACGACGACCAGTAGCGCCGCGACGACAGTCGTCGCTACCTCGTCCACCTCGAGCGCCAAGGACGCGCGCGAGGcgaataaggaaaataaagagaataaaggaGATTCTAAAGATTCGTCGCACGTAAAGGATATTAAAGAGGAATCACAATCAAGTTCGGAAACTGCTTCGGGAAAGGATATGAAAGTCACCATGGATGCCAAGGGTACCTTGTCCTCGTCGATAAACACCAGCACGACAAACTCCACGACGGTCACGTCGGATTcgaaggataagaaaaaaagcagtGGTGCTGCTACCGGTACCAGTGCTTCAGGTAGAGCCAAGGACAAGAAAAAGGAGAACCATACGACTCCTATGGAAACCAGCGACGAGGAGGCACAGTCCATAGAAACTATTGTTCTCTGGAGCAAAGAAAGAACTCGAGGTTCCACATGTTCTGGTGAAGTCACTTTACGCTTAGAACATCAAGACGAAGTATGTATCCCTTGGCCTTATGTTTTCGGATGA
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGPVGGELHRHHHPHPHEGHGHSLVTTATPTRGQAQSHQPQPPPPHNQHLPARSTPVQLHRPTQNYSSIKSSSPVSPRTVGGSYVQGGSGAPSAGGAVGPPGSGSSAGATGGAGAAGGGYVAVPVPGGLRYVHPYPPPPPSAPSAPINQTPPPPGAAAAYTRDAYRNATSNINERVAISVSSSPVSQVGVGVGVGVGVGVGAGEYVVSSRGDRPRISLLPPSSVAPAPSPTAPDYHTSGVRNPRGLMPMQPDQYCNRPMEMTNVQETPPFKKIRLGQPQSQSTCQTLSSAETCVKQEHVQLQQPLRIDTREQPAAGAYTPQTEAISPTLPEPSTQEDAQFRSNKDDLLQQISKVDREIAKRESQISKLRKKLKELEETANKPLEATGLKVEEQSQQPKHQSLAQKIYAENRKKAEEAHRLLDRLGPKVELPLYNQPSDTTVYQENRTRHQSCMRARLVARLRREHADRASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKESKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEEMSTELKNSIKARQMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSMEHELFKEKYLQHPKNFGAIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQNNSLTTDTTSTTSSTTTTTTSSAATTVVATSSTSSAKDAREANKENKENKGDSKDSSHVKDIKEESQSSSETASGKDMKVTMDAKGTLSSSINTSTTNSTTVTSDSKDKKKSSGAATGTSASGRAKDKKKENHTTPMETSDEEAQSIETIVLWSKERTRGSTCSGEVTLRLEHQDEVCIPWPYVFG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01364584;
90% Identity
iTF_00298248;
80% Identity
-