Crun012397.1
Basic Information
- Insect
- Cephus runcator
- Gene Symbol
- stc
- Assembly
- GCA_030142495.1
- Location
- JARQTC010000774.1:457312-461685[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 1.9e+04 -4.3 1.6 15 19 531 535 530 535 0.81 2 15 0.17 1.6e+03 -0.7 0.1 4 10 564 570 563 571 0.94 3 15 2.4e-06 0.023 14.8 11.3 4 18 581 595 579 596 0.94 4 15 9.3e-05 0.89 9.7 16.9 1 18 632 649 622 650 0.87 5 15 0.45 4.3e+03 -2.0 1.3 1 10 659 668 659 668 0.73 6 15 0.6 5.7e+03 -2.4 0.9 5 10 677 682 677 682 0.95 7 15 5.1e-10 4.9e-06 26.5 14.0 1 19 688 706 688 706 0.98 8 15 0.35 3.3e+03 -1.7 3.8 5 12 735 742 735 742 0.91 9 15 4.8e-06 0.046 13.9 16.2 4 18 753 767 746 768 0.86 10 15 2 1.9e+04 -4.6 1.6 5 10 797 802 797 802 0.90 11 15 0.0087 83 3.4 11.0 1 11 808 818 808 830 0.88 12 15 7e-11 6.7e-07 29.3 14.0 1 19 835 853 835 853 0.98 13 15 2 1.9e+04 -4.9 7.6 10 19 900 910 889 910 0.81 14 15 1.2e-06 0.011 15.8 14.3 1 16 946 961 946 972 0.85 15 15 8.4e-06 0.081 13.1 14.2 1 19 978 997 978 997 0.97
Sequence Information
- Coding Sequence
- ATGGCCACTTGGGATGGTTCGTACTACGAACCTGATGATCCCAACTATCATCCATACTCCAATCATGGTGATGCAGGCCCTGGAGATCAAACATGGGGTTACTATgctggaaataatttttctcgtgCAAGAGGTAATCATTATACTTCGAGCGGGTCTAGTGTTTTTGATCAGAATAGAGCTGTATCCTTTCAACAAACCAGTAGAACCAACGTTCCACCGGTTCAACAAAATGTAGCACCATTGTCTGTCTATCAAGAGCAACCAATACCCTCACTTCTGGAAAATGTTAATCAGTGTTTCTTTGAGAATAATAGAGTACAACCACAGCTACCATCGTTCAATTACAAAAGTAGTAATTATGGAGGATGGAGTAAGAACGATAATACTGATTCTAAGTACCCAGGACAAGTGAAGAattcatattcaaatataGCAGAGTATTCAAATCTGCATGTTACTGCTGGTGAATTTATACCAAACAGTGCAAAACCAAGTTATTCAGAAGCACCAATTGCCAATCTAAATAGTGCAGGGAATCAAACTAACGCACAATGCGAAGCTACAGAAATGCATCATGGAAATGCTACTGCCACGATAGAAGCAGGGCCATCTAATGTCttctacaataaaaagaaCAGCAATTATAGGCAACGTGAATCGCAAGATCAGCAACATAATCAGAATGGCTTCCATAGGAATTCTTACAAGAATCAAAATCCCAAGAACTATGGCAAGTTTCAAAATGATAGATATAACAATGGTAGACAATATTCCGAtggtaataaatattcctcTGGATGGAGggacaatgaaagaaaaaggcaGAACGTAGATCAATCAGTTTCTAATACCACCAGTGGAACCAGAGACACTTTTGGCACAGCCTCAATGTcgaaggatgaagaaaaacaacaCACTAATGGAAAGCTAAATAAGAACGGTACTAAAGGCTTGCCTTATAATGACTCCCTGTCTTATCAATATAAACAAGAGAGTTCAAGACAAGCTGGCAAATTACCCAAGTACAATTATAACGCTACTAGCAACGAGCCCAGTTCGTCTAGTCACAATTCAGAGCAGCCTCAGTCCTGGataaagaatggaaaaaagtaCTTCAGTGATGATCGTTCTGAAAGGTATCGTGAGAGAAGAGAACGCTACAGTGACAGATACGATAGTGGtcagagagagaagaggaataATTACCAGGATTATGATGgacacaaaaataattatgatgtGAGCAGCGAGAGGAGTGAAAGAAACAGAGATAAAGAGCGTAACAAGAATAGTGCCCGAGAGAACAAAGATAAAGACAATGAAAGTTGGAGGTCAAAGAATGAAACTAGCAGCAGGAGTGGTACTCCAAAACGTAGTGGCACCAAGAAATACGATACAGACGATGATGCCAGTCAAAGGGAAAGGTTAACAGATCAATTAAATAGAGGACAACTCGAATGTCTAGTATGTTGTGATCGTATAAAGCAAACAGATCATGTTTGGTCGTGTTCCAATTGTTATCATGTATTACATTTAAAGTGCACTAAGAAATGGGCCAAATCGTCGCAGAGTGaaaatggtTGGCGTTGTCCAGCCTGTCAGAATGTAACATCTGTGATAccagaagaatatttttgcttCTGCGGAAAGGGTAAGACGCCAGAATGGAATCGTCGTGAGGTCGCTCATTCCTGTGGGGACGTCTGCGGACGTATGCGAGCAAATACCAACTGTGTTCACAAATGTACTTTACTTTGTCATCCTGGTCCTTGTCCTTTATGTATCGCTATGGTGACAAAGTACTGTGGTTGCGGAAGGACTTCGCAAACACTCAAGTGTAGCACTGCGACGCTTTTGCACTGCGAGGCCACTTGcggtaaattattaaattgcgAGAAACACACCtgtgaaaaaaagtgtcacCACGGCAGCTGTGAAAAATGCGATAAAACCATACACCAAGAATGTTTCTGTGGCAAACATAATCGTGAGGTTACTTGCGACGTCGATGTTTCTTCTACGTATACATGCGAGAACATTTGTGAGAAACTCTTAGACTGTGGCAATCACAAGTGCAAGGCTCTTTGCCATCCTGGACCTTGCGAATCTTGTTCCCTGAAACCGGAAGCCGTCACTCATTGTTGCTGCGGACAGACTCCCTTGACGGAGCAGAGAAAAAGTTGTTTAGATGAAATACCAACGTGCGAGAAGATCTGTTGCAAGCGTCTAAAGTGCGGCCAACCAAGCCATCCTCATACATGCAAGTCAAAGTGCCACGAGGGTGATTGTCCGGAGTGCGAATTGATCACAAAAGTCAAATGCCGCTGTGGCAACATGGACAAGGAAATTCCTTGCAAGGAACTAACGACAAAGGCCGATGACGCTCGTTGCGAGAAAAGGTGCACCAAGAAAAGATCCTGTGGCCGACATAAGTGTAATCAAATGTGCTGCATCGATATTGAGCATATCTGCCCATTACCTTGTTCAAAAACATTAAGCTGCGGAAGGCATAAGTGTGAGCAGACATGTCATAAAGgaAGGTGCCAGCCCTGCTGGAGAAGCAGTTTTGATGAACTGTTCTGCGAATGTGGTGCTGCTGTTTTATATCCTCCAATTCCTTGCGGCACGAGACGTCCCGTCTGTGATAAACCTTGTTCACGACAGCACGCGTGCTCGCACGAGGTGTTGCACAATTGTCACAGCGAAGCTACGTGTCCTCCGTGCACTGTGCTCACTCAAAATTGGTGTTACGGTAAGCACGAGTTGCGCAAAGCCGTGCCGTGTCATGTGAATGAAATATCGTGCGGTTTACCATGCAACAAACCAATATCATGCGGACGACATAAGTGCATCACACTTTGTCACGCTGGACCTTGTGAAAAACCAGGACAAGTGTGTACGCAGCCATGTACCACACCTAGGGATTTATGTGGACACATTTGTGCTTCTCCTTGTCACGAGGGAAAATGTCCTGATACTCCATGTAAAGAAATGGTCAAGGTTACCTGCCAATGCGGTCATAGAAGTATGACTAGAGCTTGTGTTGAGAACTCGCgcgaatttcaaagaataGCCAGTGGTATACTTGCCAGTAAAATGGCAGACATGCAACTTGGTCATTCGGTGGACTTGGAAGAAGTCTTTGGCCAGGGTGCGAAGAAGCAGAACCAGTTAAAAACTTTAGAGTGTAATGATGAGTGTAAGGTTATTGAAAGAAACAGGAAACTGGCTCTGAGCTTGCAAATTGTCAATCCTGATCTGAGTGGCAAGCTTATGCCACGGTATAGCGATCTTATGAAACATTGGGCCAAGAAGGATCCTTTCTTCTGTCAAATGGTCCATGATAAATTGACGGAACTAGTTCAGTTGGCTAAAACGTCTAAGCAGAAGTCAAGGAGTTATTCCTTTGAATGTATGAATCGAGATAAGCGACACTTTGTTCATGAATACTGTGAACAGTTTGGCTGCGAAAGTCAAGCTTATGATCAGGAACCGAAGAGGAATGTTGTTGCTACTGCTGTGAAGGATaagTGTTGGATGCCGAGTCTAAGTTTATTAGAGTTAGTACAACGGGAAAGTGGTCAAAGGAAGGTACCAGGTCCTATGCTCAATACGTCAAAAGCTAACTGCTCTCTAAGAAATGTCGAAGTTCTCCCCTTGCCCGCTAAGAAAGGCCACAAACTCGTGTCGATGCCGTCAACTTCAAAGTCGAAGATTAGTCAAAGATGA
- Protein Sequence
- MATWDGSYYEPDDPNYHPYSNHGDAGPGDQTWGYYAGNNFSRARGNHYTSSGSSVFDQNRAVSFQQTSRTNVPPVQQNVAPLSVYQEQPIPSLLENVNQCFFENNRVQPQLPSFNYKSSNYGGWSKNDNTDSKYPGQVKNSYSNIAEYSNLHVTAGEFIPNSAKPSYSEAPIANLNSAGNQTNAQCEATEMHHGNATATIEAGPSNVFYNKKNSNYRQRESQDQQHNQNGFHRNSYKNQNPKNYGKFQNDRYNNGRQYSDGNKYSSGWRDNERKRQNVDQSVSNTTSGTRDTFGTASMSKDEEKQHTNGKLNKNGTKGLPYNDSLSYQYKQESSRQAGKLPKYNYNATSNEPSSSSHNSEQPQSWIKNGKKYFSDDRSERYRERRERYSDRYDSGQREKRNNYQDYDGHKNNYDVSSERSERNRDKERNKNSARENKDKDNESWRSKNETSSRSGTPKRSGTKKYDTDDDASQRERLTDQLNRGQLECLVCCDRIKQTDHVWSCSNCYHVLHLKCTKKWAKSSQSENGWRCPACQNVTSVIPEEYFCFCGKGKTPEWNRREVAHSCGDVCGRMRANTNCVHKCTLLCHPGPCPLCIAMVTKYCGCGRTSQTLKCSTATLLHCEATCGKLLNCEKHTCEKKCHHGSCEKCDKTIHQECFCGKHNREVTCDVDVSSTYTCENICEKLLDCGNHKCKALCHPGPCESCSLKPEAVTHCCCGQTPLTEQRKSCLDEIPTCEKICCKRLKCGQPSHPHTCKSKCHEGDCPECELITKVKCRCGNMDKEIPCKELTTKADDARCEKRCTKKRSCGRHKCNQMCCIDIEHICPLPCSKTLSCGRHKCEQTCHKGRCQPCWRSSFDELFCECGAAVLYPPIPCGTRRPVCDKPCSRQHACSHEVLHNCHSEATCPPCTVLTQNWCYGKHELRKAVPCHVNEISCGLPCNKPISCGRHKCITLCHAGPCEKPGQVCTQPCTTPRDLCGHICASPCHEGKCPDTPCKEMVKVTCQCGHRSMTRACVENSREFQRIASGILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKVIERNRKLALSLQIVNPDLSGKLMPRYSDLMKHWAKKDPFFCQMVHDKLTELVQLAKTSKQKSRSYSFECMNRDKRHFVHEYCEQFGCESQAYDQEPKRNVVATAVKDKCWMPSLSLLELVQRESGQRKVPGPMLNTSKANCSLRNVEVLPLPAKKGHKLVSMPSTSKSKISQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01131248;
- 90% Identity
- iTF_01473596;
- 80% Identity
- -