Basic Information

Insect: Cephus runcator
Gene Symbol: gtf3a
Assembly: GCA_030142495.1
Location: JARQTC010000879.1:175506-180521[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.9e-05 0.0029 18.1 0.0 2 23 928 949 927 949 0.97

2 17 6.5 4.7e+02 1.7 0.4 1 19 955 973 955 976 0.90

3 17 0.79 58 4.5 1.3 2 23 982 1003 981 1003 0.95

4 17 0.00011 0.0077 16.7 1.2 3 23 1012 1033 1011 1033 0.98

5 17 0.005 0.36 11.5 2.1 1 23 1040 1063 1040 1063 0.95

6 17 0.00012 0.0088 16.5 0.7 1 23 1069 1092 1069 1092 0.94

7 17 1.7 1.2e+02 3.5 2.5 2 23 1100 1120 1100 1120 0.94

8 17 1.8e-07 1.3e-05 25.5 2.1 2 23 1126 1147 1125 1147 0.97

9 17 3.9e-06 0.00028 21.2 0.3 1 23 1153 1175 1153 1175 0.99

10 17 0.00081 0.059 13.9 2.1 2 23 1187 1209 1186 1209 0.95

11 17 0.01 0.74 10.5 2.5 1 23 1215 1238 1215 1238 0.96

12 17 0.078 5.7 7.7 5.6 2 23 1260 1282 1259 1282 0.95

13 17 0.0026 0.19 12.3 0.5 2 23 1289 1311 1288 1311 0.96

14 17 0.00039 0.029 14.9 2.8 2 23 1319 1340 1318 1340 0.96

15 17 0.0015 0.11 13.1 2.3 1 23 1346 1369 1346 1369 0.96

16 17 0.42 30 5.4 3.2 2 23 1376 1397 1375 1397 0.96

17 17 0.012 0.89 10.2 2.6 1 23 1403 1425 1403 1425 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.9e-05	0.0029	18.1	0.0	2	23	928	949	927	949	0.97
2	17	6.5	4.7e+02	1.7	0.4	1	19	955	973	955	976	0.90
3	17	0.79	58	4.5	1.3	2	23	982	1003	981	1003	0.95
4	17	0.00011	0.0077	16.7	1.2	3	23	1012	1033	1011	1033	0.98
5	17	0.005	0.36	11.5	2.1	1	23	1040	1063	1040	1063	0.95
6	17	0.00012	0.0088	16.5	0.7	1	23	1069	1092	1069	1092	0.94
7	17	1.7	1.2e+02	3.5	2.5	2	23	1100	1120	1100	1120	0.94
8	17	1.8e-07	1.3e-05	25.5	2.1	2	23	1126	1147	1125	1147	0.97
9	17	3.9e-06	0.00028	21.2	0.3	1	23	1153	1175	1153	1175	0.99
10	17	0.00081	0.059	13.9	2.1	2	23	1187	1209	1186	1209	0.95
11	17	0.01	0.74	10.5	2.5	1	23	1215	1238	1215	1238	0.96
12	17	0.078	5.7	7.7	5.6	2	23	1260	1282	1259	1282	0.95
13	17	0.0026	0.19	12.3	0.5	2	23	1289	1311	1288	1311	0.96
14	17	0.00039	0.029	14.9	2.8	2	23	1319	1340	1318	1340	0.96
15	17	0.0015	0.11	13.1	2.3	1	23	1346	1369	1346	1369	0.96
16	17	0.42	30	5.4	3.2	2	23	1376	1397	1375	1397	0.96
17	17	0.012	0.89	10.2	2.6	1	23	1403	1425	1403	1425	0.98

Sequence Information

Coding Sequence: ATGAGTGTCTCTGAGGAGACTACTGTATATCTCCCCTATGGGGATGTGGAAGCGGAGGATCCTGCTAAAGGTAAATTGGATGAAGCTTGTATCTATGCTGGCGACGagaaaatgcaagaaaatGACACTGTGAAGCCTGAAGTTAAAAATTCTACCAAAGATGGTAAATCTCAGTCAACCCAGGAGAGTTCAACTGTCTCAGGACAGTCTAACCGAGAGAAATGCAAACCCTTGGGCAATTCACCGCCACCTATAAGCGGTTCGGACGCATCAATACAGCCAAGTTTGCAAAGCGATTCCTTATCGAAGAATACTTCATCGAAAGTGCTATCCGCTAAACAAGTAAATGTTGCACAGACATCGAGCACCAAGAATATAgGTCGTAGACGAGAATCACAAGCTGATTACAGTAAAGCTTCAAGTTCGATGTCTCCAGGACGTTCTGCTAATGTTACTGTACCTAATAATGTGGAAAAGATAACATCGCGACGGAATTCTAAGGTAAATAACGCCAAAACTGAAACTGCAAATCTAGAATTACATCATTGTGGAGATCAAGAGAAATTATTAAGTACCAACGACAATATTAATCTTATACCACAAGAGAAGATTTCTGCaagtaaaacaaataaattaacaactATCTCTCAAGAGAAATCGGtatgtcaaataaaaactataaatgATTTGAAGAAGGCAACACCACGAGTCAAATTCCTTACGGATGAGCCTAAGAGCTTGACTGAATTCAGGAAGTTACATTCATCTAACACAACAGACCTACCTACGCATTCAATCAAAAAAACAGTACAAACTAAAGCATTGATACTGGAAGAAACTAGACAACAATTAAAGAAGTATTGTCGCACATGCGCCGGTTTGAAATTACCTCTCGTGGATATATTCAGTAGAAAGGGCATGCAGATGCGACTGAATCAGCAAATGAAGCATTTGGAAGTAATTAATGAGCAAGATAGCTTATCAACGCAGATGTGCATGGATTGCATATGCGATTTAAAGATgagttacaaatttttcatgcaaattAAAAAGGCTGAGGTTAAACTTAAATCAATTTACATAAGTCTAGCCGATGCAAATGCTAATGAAATAAAGTCTAGAAATTTGAATGCCGATAAAATACCAATATCGGGACCATCTTGTTCCATCAAGGAAGATCCTGATAGAAGTACAGAATCATTAAGAGACTTACTCTCCGGTGCTAACGAAGTTGACCTAGACGACAGTATACCAAAAATATCAGCTATATTCTCCCTGCAAGACTTACAAGAAACCCCCAAGTCCAGTGacgatatgaattttgaaatgaatataaaaaccGAACCGGAAGAGCACGAAGACTACCCACCATTCAATCAAAGCGACGACAATGACTCTATAGAAGAGTTTGACCCAGAGGATCCACCTTTTCAAGTTGACAGCTCAGATACCGGCGAATCTGAGGATGAACTGGAGAGTCGTAGATTACAGAATTTCAGAAATTCTCAAATTGTACAAATGCAACAAACTACAGAATTGGCAGCTTCCAACAGCAAGTCTAATGCATCTTCGAGCAACCCACCTGGACAAGATTGTAAAAAGGATAACAAACCAATGATCTACAAGTatgatactttttataaatccTACGTCAAGGTGGATACTTTGGAAAAAGACGAAGTTCATTCCAATACAACTGACACTTTGAAGAGCAAAAACGATAGTGAGAATCATGGACATgtaagagaaggacagacaCAACCTAACATCTTGAAGAGGAAGTTACCACTTCTAATAAAAAAGGAACCGCACCTTGATACAGACATCAGTAGCGATGCTCTGGATATTCTGAACTCTAGTGGTGGTCTGAAGGATTCAAAGatgcaaaaattaaatgtacaaAATGCTCTGAACATTGGATCTCCCGAAGAGGAAGGAATAATGTACGTGACGGTGAAGGGATCAAAGCCAAATGAATTGCTTCTGGTAAAAGTGAAGAAGATGGACAAAAACATTGATAAGAAAGACGAGAAGTCTCTCGGTAAGAAAACCCTGGACGTTAAGCCCGTGGATaagattttaaagaaatacgaaCATTTTACTGGTAAGGAGAAAGATTTGTTTCCtgagagatttaaaaaaactgataTAAGGGAGCAGATCATTGAAGAGCAGATCGAAGAGTACAAGAAGAAGCGCGAGAAGGTTTTGGGCGGTAATGCTGTGGGGTTTCCAAACGCCCTGAAACTTGAAGATGGTCAAGTGCGTTTTGTTAAGCAAAATGATAATCAGATTCTTCGGCGTTCTTTGTCCACTGATAGTAATTTGATGATAAAGAAAGATGCTGTCAAGGGAAACGAGGTTAAGAAACCTGATGAAGTGGATCTAAAGGATGTGATTGAGTTAACAAGAACTTTGGAAGACAAGAGTCCAGGTGATAAGACTTACGTTAATACGGAGGAGTATCTGTCGCGTTTAgcaaaattgaaacaaaagtgggaagaagcaaagaagaagaaggaatcACTTCAAAAGGAACTTGATCAATCATACACCGAAGGAAATATGGAGAAACTTGCAAGGATTCTGGGTGAACGTGAACAAAATCTACAGGACTTTCAAGATTACTTGAAACAGAGGAAAATTGTTATCACGAGGCTTAAGGATGAGGATATCATTTCACTTTATGAGGATAGAAATAATACTACTCTGAAGAAGAGTCTTCCTGATTTAATAGATGAGACCCAGCCGCTGGATTATATACCAGAAGAGAATTTTCTGGAGTGTGATTATTGTCCTGAAGCATTTGCTACGAAAGAAGCATTGGAGGAACATTTGAAGAGCCACGACTATAAAATAATGCACTATTGTGAAGATTGCATGGAAGAATTCCCAACAAATAAAGCAAAGAGGAATCATAACATATCTTGCTTGAAAAAGCTTATCTGTAAGTATTGTGACTTCATGCTGGATTCCAAAGGGAAGAAGAGACAGCACGAACAAAAACATTGTGACAACATGGATGGACAGTTATGTGACGTTTGTGGTGAAAAATTCAAGCATCAAGGTACCCTGGATCAACATATAAAAACTCAACACATGAGTTGGGAGAAGATTTTTCAATGTCCCAAGTGTCCCAAAAAGTTTGCATTTAAACAGAAATTaagttttcatttaaaatcGGTGCACACTACTTTGCGTGCTTACTTGTGTGAGGATTGCGGAGCAGACTTTAAGAATCCTGCTAGTCTGAGACATCACAGAATACGAAAACATCAGCCTGTGGGTAATAAACGTGAGTGTCCGGTATGTCACAAGTTAGTACCATTTTACAGTCTGTCGAAGCACATGCATACTCACAAAGCTTACACAATACAGTGTCCGCACTGTGataaaatgttcaaaaataGTTCCACCTTAAAGCAGCACGTAAGAATACATGAAGATCAAAGACAATTCAGATGTGACACGTGTGGTGTTGGATTTAACAGAAGGGATGGCTTGAGATTGCACATGCGAGTCCATGAGAAGACAGACAGCAGAGGCCTGAAGGAGTGTTCTTGTCAGGTATGCGGAGAAAAGTTCCCTAACCACTCCATGCTCGTCATCCACAGGAACAGAGTGCACAAGGATGGCAGGCAATATACCTGTCACATATGTAACAGATCTATGATCTCTACGAGATCACTGGAATGGCATATGTCTCATATTCACAACGAGTCACTACCAGGAACACAGAAAGATGATGGTGAAATCGgatctgaaaagaaaagggtgaCCTGCTGTCACTGTAACAAGACCTTCAAGACAGAAATGATCCTAAGGACACATATTAAGAATACACACATGGAAAAGGACCCACTGAAATGTGCAGAGTGTGAAGAGACATTCACATCTGATATAAGATTGAGGCATCATATGATGGTTATTCATAACAGACTCGAAGGCACTTTAGAATGTCCACATTGTCCTAAAAGATTTGTTAATCATCTCAGACTGAAAACTCACATGATATCCCACTCCGAGGAAAGACCTTACACTTGTGAGATATGTGGATTTAATctaaaaactaaaatacaGTTGATCAAGCACCATCAGAATAGGCACAGCGATGAGAGACCCTTACAATGCAGATACTGTCCTTGGAGATGTAAACAAGTTAGTGCCCTGGTCTGTCATGAAAGAACTCATACGAATGAACGGCCCTACTCTTGCAGTGTATGTAGACAACGATTCAAATACCTGGGTGACAAGAACAAACATGAGAGACGACACGAAAGTCTTGGTGGTTCAGGTTTCAAGAGAATAGTGGCTGgtagaaatattaaacaaataaaaattcaagaggAAGAGACATCCTCTTCGCAAGACCCAGAAGATTTTGATCAGGGTCAGCCATCGTTGCATACAGAAGAGGAATATAGTTCAAAGTTCGATGATGACCAAATAATCAAGTATGAAGCACAGGATATCGAAGAAGAATCCTATGAGCAGAGTTACGAACCGCCGGAATACGAAGAGACTTCAAGGGAGGCTTCTGAGGCAGCTGAAGTAATAATGAGTATGGAAGATACAACAGTGTACACAGAAGAAGTAACAGCGGACAATATTGAAACTGCTGAGATGATAGCCGATGAAATGATGACAAGTCAAATTCTACAATCAGGTACCGTAGTTCATTTACAACAGCAGGACGATTCAGGAAAGATTCAGGTAATACCTGTAATGTTATCGTTGCCTGATTTGACCGATAGCAATGCAGAGGTTAATCTGGCAACTGCTTCAATcatgtataataattga
Protein Sequence: MSVSEETTVYLPYGDVEAEDPAKGKLDEACIYAGDEKMQENDTVKPEVKNSTKDGKSQSTQESSTVSGQSNREKCKPLGNSPPPISGSDASIQPSLQSDSLSKNTSSKVLSAKQVNVAQTSSTKNIGRRRESQADYSKASSSMSPGRSANVTVPNNVEKITSRRNSKVNNAKTETANLELHHCGDQEKLLSTNDNINLIPQEKISASKTNKLTTISQEKSVCQIKTINDLKKATPRVKFLTDEPKSLTEFRKLHSSNTTDLPTHSIKKTVQTKALILEETRQQLKKYCRTCAGLKLPLVDIFSRKGMQMRLNQQMKHLEVINEQDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIYISLADANANEIKSRNLNADKIPISGPSCSIKEDPDRSTESLRDLLSGANEVDLDDSIPKISAIFSLQDLQETPKSSDDMNFEMNIKTEPEEHEDYPPFNQSDDNDSIEEFDPEDPPFQVDSSDTGESEDELESRRLQNFRNSQIVQMQQTTELAASNSKSNASSSNPPGQDCKKDNKPMIYKYDTFYKSYVKVDTLEKDEVHSNTTDTLKSKNDSENHGHVREGQTQPNILKRKLPLLIKKEPHLDTDISSDALDILNSSGGLKDSKMQKLNVQNALNIGSPEEEGIMYVTVKGSKPNELLLVKVKKMDKNIDKKDEKSLGKKTLDVKPVDKILKKYEHFTGKEKDLFPERFKKTDIREQIIEEQIEEYKKKREKVLGGNAVGFPNALKLEDGQVRFVKQNDNQILRRSLSTDSNLMIKKDAVKGNEVKKPDEVDLKDVIELTRTLEDKSPGDKTYVNTEEYLSRLAKLKQKWEEAKKKKESLQKELDQSYTEGNMEKLARILGEREQNLQDFQDYLKQRKIVITRLKDEDIISLYEDRNNTTLKKSLPDLIDETQPLDYIPEENFLECDYCPEAFATKEALEEHLKSHDYKIMHYCEDCMEEFPTNKAKRNHNISCLKKLICKYCDFMLDSKGKKRQHEQKHCDNMDGQLCDVCGEKFKHQGTLDQHIKTQHMSWEKIFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCHKLVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESLPGTQKDDGEIGSEKKRVTCCHCNKTFKTEMILRTHIKNTHMEKDPLKCAECEETFTSDIRLRHHMMVIHNRLEGTLECPHCPKRFVNHLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNIKQIKIQEEETSSSQDPEDFDQGQPSLHTEEEYSSKFDDDQIIKYEAQDIEEESYEQSYEPPEYEETSREASEAAEVIMSMEDTTVYTEEVTADNIETAEMIADEMMTSQILQSGTVVHLQQQDDSGKIQVIPVMLSLPDLTDSNAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00770568;
90% Identity: iTF_01131030;
80% Identity: -