Basic Information

Insect: Cephus runcator
Gene Symbol: -
Assembly: GCA_030142495.1
Location: JARQTC010000667.1:1149074-1152384[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0011 0.077 13.6 0.0 2 20 468 486 467 488 0.92

2 15 0.00037 0.027 15.0 1.0 1 23 496 518 496 518 0.96

3 15 0.00078 0.056 14.0 2.6 2 23 530 552 530 552 0.97

4 15 2.5e-05 0.0018 18.7 0.1 1 23 558 580 558 580 0.98

5 15 9.4e-06 0.00068 20.0 2.8 1 23 586 608 586 608 0.95

6 15 0.0001 0.0076 16.7 3.0 1 23 617 639 617 639 0.97

7 15 0.00025 0.018 15.6 0.7 3 23 647 667 645 667 0.97

8 15 1.1e-05 0.00079 19.8 0.6 1 23 672 694 672 694 0.97

9 15 0.0014 0.1 13.2 3.2 1 23 701 723 701 723 0.98

10 15 0.00012 0.0085 16.6 0.4 2 23 772 794 771 794 0.96

11 15 0.1 7.3 7.4 0.7 1 23 800 822 800 822 0.96

12 15 0.00079 0.058 14.0 3.1 1 23 828 850 828 850 0.98

13 15 6e-07 4.4e-05 23.8 0.6 1 23 856 878 856 878 0.97

14 15 1.5e-05 0.0011 19.4 0.9 1 23 884 906 884 906 0.97

15 15 0.00038 0.028 15.0 0.1 2 23 912 933 911 933 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0011	0.077	13.6	0.0	2	20	468	486	467	488	0.92
2	15	0.00037	0.027	15.0	1.0	1	23	496	518	496	518	0.96
3	15	0.00078	0.056	14.0	2.6	2	23	530	552	530	552	0.97
4	15	2.5e-05	0.0018	18.7	0.1	1	23	558	580	558	580	0.98
5	15	9.4e-06	0.00068	20.0	2.8	1	23	586	608	586	608	0.95
6	15	0.0001	0.0076	16.7	3.0	1	23	617	639	617	639	0.97
7	15	0.00025	0.018	15.6	0.7	3	23	647	667	645	667	0.97
8	15	1.1e-05	0.00079	19.8	0.6	1	23	672	694	672	694	0.97
9	15	0.0014	0.1	13.2	3.2	1	23	701	723	701	723	0.98
10	15	0.00012	0.0085	16.6	0.4	2	23	772	794	771	794	0.96
11	15	0.1	7.3	7.4	0.7	1	23	800	822	800	822	0.96
12	15	0.00079	0.058	14.0	3.1	1	23	828	850	828	850	0.98
13	15	6e-07	4.4e-05	23.8	0.6	1	23	856	878	856	878	0.97
14	15	1.5e-05	0.0011	19.4	0.9	1	23	884	906	884	906	0.97
15	15	0.00038	0.028	15.0	0.1	2	23	912	933	911	933	0.96

Sequence Information

Coding Sequence: atgaagataGTTTGTGCTTCGACTACGTGTAAATATGCTTCCGAGGAAGAGGATTCGAcaaatgtcatttttataagttttcCAAATAATGATACGTCAAAACTATGGGCTCATAATTGTAGCCGACTGGATTTGTTGAGCAAATCTAATGAGGAACTGCATAGTAATTACTATATATGCTCACATCATATAGAAGATCATTGTTTTATTAGCAAATGTAAACCAATCACGATTGCTCAAGGCACAGTTCCAACTCTATTTCAAATGGAACCTATAATAGCCCCATTAACACCTGTAACTTCTGAAAAAGCACctgaatatgaaaatcaacATAGTAAGGACAACATACAATCATGTGACAGCTCTTtaaattcaatgaataatattaaggGAACAGATATGGCACTTAATACCAATTTTCATGCCAGAGTACTCAACCATGAATCTATTGATGAAAAAAGTAACACAGTAACTATCTTTAATAGATGTGTTTCATCAGAGACATCTGATAATGATGCTCTCAGATACTGTGATATAAATACTGAAATAGAGCAGTACAGCAGTGTGACAATAGGATTTTCTAGTTTGTGTCGAATATGTGGTGATGAAGCATCAGATGggatagaaatattttccacaAAAGGCATTGAATTAAAGCTAcgttataaaatacaattgcaTATGCCAATATCCATTGATGTTGAAGACATAATGCCACAAAGACTTTGTCTTAATTGTTATAACAAATTGGAAGTTACACATTCATTGGTCGTAACGTGTTTACAAACTAACATGCGATTCAGACGGTTCTTAAATATTGAAGGGATGGCAGAATATGATAAAAGATTCGATGCGTTGGTGGAAGAATGTTCAATAGAAGTGGCTGAGGAAATTTGTGGTAGTGATACAATTCAAAGTGAAACAATATCTCttgtatcaaaaaaaaatgaagaatcagAAGCAACTAACAAAGTGGAATGTAATCTAAACAAATGTTCAGCGACTGCAGATTTGGAACATACCCCAATTGCACAAATAACAGCTGGCGGGTTGAATGTTAATGATGTAAATAAGTTGAAATTTACAGTTGATTCAACTAGTGAAGTGCATTCCGATTTGAGCGATTTGTTTCACGTATTTAAAGGCatcaaaaacaaagaaaatgaatgcGTAATCGAGACTGTTTCAGAGGCTCAAAAAATTGTCCACAATAAAGAAGAGAGTAATCTCATATGTTTATTATGTAAAGATACATTTAAAACGGtagagatatttgaaaatcataaaattttatgcgATGATGGAGATGCACTAGATTTAAAACAACAAAAGGAATCATCCAATTCTGATAATTTGGCAACAGAACCGGCTAGTACAATAGATTTTCAATTCAGTATGAAATCATGCGATGTGTGTGGAAAAGTTTTTGAGACAGAGGCTCTTCTTCAAGATCATGAAATATCCTGTTGTCAGCCATTCATGCAATACAGCTGCCATATTTGTGACCAACAATTTGCAAACAAGGAGGAATTTGTTCTTCATGAACAATTGCACGTTCCTGTAAATAACGTAACCACTCCAGTAAGAAGATGTGGTTACTGTCAAGCTACGTTTCACACGCGAAAAGAATTGCAAAATCACATAATGAAGTATCATGGTGGtcaaacattatttaaatgcAATATTTGTGACAAAGCGTATGAGAAATGGTCCAGTTTAGACGTTCACGAAGCCACGCATAGATTAGATAAACCCTTCCTTTGTGATTTATgtggaaaaagttttaagcACTCGAATAATTTGAGAGGGCACAAAAGAATTCACTTAGAGGAGTCTAAAAAGAAACGTCATGTTTGTGAACTCTGCGGCAATGCATTTAGATCTAGATTTCATCTAAATGAGCATATGAATCAACACAATGGTAATAAACCATATGGTTGCGAGCAATGCGGCAAGGCTTTCTACAAAAGAATACAATTGCGCCAACATAAATTGTCCCatggattaaataaatttgcttGTCCAATTTGCGGCGTTACATTTAATCGCAGAGGGAACATGAATACGCATTTTAAGAGACACAGTACTCAAGATGGAGTATATACTTGTAGTGTATGCGAATATAGGTGTAAATCAATgagtgatttaaaaattcacagaAAGGAACATTCCGAAGAAGACATAATGGAAAGTGTAAAGAAGAAAGCTATCGACAAGACAGTATGGCAGTGCAGAATCTGTGCTAGAGTATTTCTGAAACGTACTATTTGGTTGAACCATGAAAGATCACACACAGGTGAGAAAGTTAGTGTCGAGTGTGACGAGTGTGGGAAAAAATTAGCAAGCAAGAGTTCATTAACGTATCACAAAAAATCTATACACTCCTCAGAACGACCACATATGTGTCAATTTTGTGGAGATTCCTTCGTCTCTAAAGAGGCGAGATTGATACACGAACGTATTCATACTGGCGAACGACCTTACgtatgtaaaatatgtaaCATGCAGTACAGATGTTCAAGTAATCTTAGTCAACATATGAAGATACATTCAGAAGCTAGGCCCCACGTATGTCCATATTGTAATAAAGGCTTTACACGTAAAGGCGCACTTAATGTTCACGAGCGTATTCATACTGGCGTTAAACCATTCGCATGTGTCGTCTGTGGTCGAAATTTCTCGCAGAAAAATGATATGCTCAAGCATACGAGAACTCATCGTGTTAAATCAATTCGCTGCGAACAGTGTGATGAGGTGTTTGCGACCAAGAGGGAAATTCTTAAACACATTGCGGTGCACGAACAAAATGTAGAGAGTTCTGTTATACAGCGGTATGTGGACATGCCGCAACATGTAGAATCGTACTCAATAAATATACCTTATTCTAGTATCGAGGAATCCGATGAGTTGGAGATTGCACAGAATAATTAG
Protein Sequence: MKIVCASTTCKYASEEEDSTNVIFISFPNNDTSKLWAHNCSRLDLLSKSNEELHSNYYICSHHIEDHCFISKCKPITIAQGTVPTLFQMEPIIAPLTPVTSEKAPEYENQHSKDNIQSCDSSLNSMNNIKGTDMALNTNFHARVLNHESIDEKSNTVTIFNRCVSSETSDNDALRYCDINTEIEQYSSVTIGFSSLCRICGDEASDGIEIFSTKGIELKLRYKIQLHMPISIDVEDIMPQRLCLNCYNKLEVTHSLVVTCLQTNMRFRRFLNIEGMAEYDKRFDALVEECSIEVAEEICGSDTIQSETISLVSKKNEESEATNKVECNLNKCSATADLEHTPIAQITAGGLNVNDVNKLKFTVDSTSEVHSDLSDLFHVFKGIKNKENECVIETVSEAQKIVHNKEESNLICLLCKDTFKTVEIFENHKILCDDGDALDLKQQKESSNSDNLATEPASTIDFQFSMKSCDVCGKVFETEALLQDHEISCCQPFMQYSCHICDQQFANKEEFVLHEQLHVPVNNVTTPVRRCGYCQATFHTRKELQNHIMKYHGGQTLFKCNICDKAYEKWSSLDVHEATHRLDKPFLCDLCGKSFKHSNNLRGHKRIHLEESKKKRHVCELCGNAFRSRFHLNEHMNQHNGNKPYGCEQCGKAFYKRIQLRQHKLSHGLNKFACPICGVTFNRRGNMNTHFKRHSTQDGVYTCSVCEYRCKSMSDLKIHRKEHSEEDIMESVKKKAIDKTVWQCRICARVFLKRTIWLNHERSHTGEKVSVECDECGKKLASKSSLTYHKKSIHSSERPHMCQFCGDSFVSKEARLIHERIHTGERPYVCKICNMQYRCSSNLSQHMKIHSEARPHVCPYCNKGFTRKGALNVHERIHTGVKPFACVVCGRNFSQKNDMLKHTRTHRVKSIRCEQCDEVFATKREILKHIAVHEQNVESSVIQRYVDMPQHVESYSINIPYSSIEESDELEIAQNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00252993;
90% Identity: iTF_00291719;
80% Identity: -