Basic Information

Insect: Cephus brachycercus
Gene Symbol: -
Assembly: GCA_030142315.1
Location: JARQSX010000674.1:1279465-1282782[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0011 0.079 13.6 0.0 2 20 469 487 468 489 0.92

2 15 0.00037 0.027 15.0 1.0 1 23 497 519 497 519 0.96

3 15 0.00079 0.058 14.0 2.6 2 23 531 553 531 553 0.97

4 15 2.5e-05 0.0019 18.7 0.1 1 23 559 581 559 581 0.98

5 15 9.5e-06 0.0007 20.0 2.8 1 23 587 609 587 609 0.95

6 15 0.00011 0.0079 16.7 3.0 1 23 618 640 618 640 0.97

7 15 0.00026 0.019 15.6 0.7 3 23 648 668 646 668 0.97

8 15 1.1e-05 0.00081 19.8 0.6 1 23 673 695 673 695 0.97

9 15 0.0086 0.63 10.7 5.0 1 23 702 724 702 724 0.98

10 15 0.00012 0.0087 16.6 0.4 2 23 773 795 772 795 0.96

11 15 0.1 7.5 7.4 0.7 1 23 801 823 801 823 0.96

12 15 0.00081 0.059 14.0 3.1 1 23 829 851 829 851 0.98

13 15 6.1e-07 4.5e-05 23.8 0.6 1 23 857 879 857 879 0.97

14 15 3.6e-05 0.0027 18.2 0.9 1 23 885 907 885 907 0.97

15 15 0.00039 0.029 15.0 0.1 2 23 913 934 912 934 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0011	0.079	13.6	0.0	2	20	469	487	468	489	0.92
2	15	0.00037	0.027	15.0	1.0	1	23	497	519	497	519	0.96
3	15	0.00079	0.058	14.0	2.6	2	23	531	553	531	553	0.97
4	15	2.5e-05	0.0019	18.7	0.1	1	23	559	581	559	581	0.98
5	15	9.5e-06	0.0007	20.0	2.8	1	23	587	609	587	609	0.95
6	15	0.00011	0.0079	16.7	3.0	1	23	618	640	618	640	0.97
7	15	0.00026	0.019	15.6	0.7	3	23	648	668	646	668	0.97
8	15	1.1e-05	0.00081	19.8	0.6	1	23	673	695	673	695	0.97
9	15	0.0086	0.63	10.7	5.0	1	23	702	724	702	724	0.98
10	15	0.00012	0.0087	16.6	0.4	2	23	773	795	772	795	0.96
11	15	0.1	7.5	7.4	0.7	1	23	801	823	801	823	0.96
12	15	0.00081	0.059	14.0	3.1	1	23	829	851	829	851	0.98
13	15	6.1e-07	4.5e-05	23.8	0.6	1	23	857	879	857	879	0.97
14	15	3.6e-05	0.0027	18.2	0.9	1	23	885	907	885	907	0.97
15	15	0.00039	0.029	15.0	0.1	2	23	913	934	912	934	0.96

Sequence Information

Coding Sequence: atgaagataGTTTGTGCTTCGACTACGTGTAAATATGCTTCCGAGGAAGAGGATTCGacaaatgtcatttttataagttttccAAATAATGATACGTCAAAACTATGGGCTCATAATTGTAGCCGACTGGATTTGTTGAGCAAATCTAATGAGGAATTAcatagtaattattatatatgctCACATCATATAGAAGATCATTGTTTTATTAGCAAATGCAAACCAATCACGATTGCTCAAGGCACAGTTCCAACTCTGTTTCAAATGGAACCTGTTATAGCCCCATTAACACCTGTAACTTCTGAAAAAGCACctgaatatgaaaatcaacaTAGTAAGGACAACATACAATCATGCGACAGCTCtttaaattcaatgaataatattgatgGAACAGATAATATGGCACTTAATACCAATTTTCATGCCAGAGTACTCAACCATGAATCTGTTGATGAAAAAAGTAACACAGTAACTATCTTTAATAGATGTGTTTCATCAGAGACATCTGATAATGATGCTCTCAGATACTGTGATATAAATACTGAAATAGAGCAGTACAGCAGTGTGACAATAGGATTTTCTAGTTTGTGTCGAATATGTGGCGATGAAGCATCAGATGggatagaaatattttccgCAAAAGGCATTGAATTAAAGCTACGCtataaaatacaattgcaTATGCCAATATCCATTGATGTTGAAGACATAATGCCACAAAGACTTTGTCTCAATTGTTATAACAAATTGGAAGTTACACATTCCTTGGTCACAACGTGTTTACAAACTAACATGCGATTCAGACGGTTCTTAAATATTGAAGGGATGGCAGAATACGATAAGAGATTCGATGCGTTGGTGGAAGAATGTTCAATAGAAGTGGATGAGGAAATTTGTGGCAGTGATACAACTCAAAGTGAAACAATATCTCttgtatcaaaaaaaaatgaagaatcagAAGCAATTAACAAAGTGGAATGTAATCTAAACAAATGTTCAGCAACTGCAGATTTGGAACATACCCCAATTGCACAAATAACAGCTGGCGGGTTGAATGTTAATGATGTAAATAAGTTGAAATTTACAGTTGATTCAACTAGTGAGGTGCATTCCGATTTGAGCGATTTGTTTCACGTATTTAAAGGCatcaaaaacaaagaaaatgaatgcGTAATCGAGACTGTTTCAGAGGCTCAGAAAATTGTCCACAATAAAGAAGAGAGTAATCTCGTATGTTTATTATGTAAGGATACATTTAAAACGGtagagatatttgaaaatcataaaattttatgcgATGATGGAGATGCGCTAGATTTAAAACAGCAAAAGGAATCATCCCATTCTGATAATTTGGCAACACAACCGGCTAGTACAATAGATTATCAATTCAGTATGAAATCATGCGATGTGTGTGGAAAAGTTTTTGAGACAGAGGCTCTTCTTCAAGATCATGAAATATCCTGTTGTCAGCCATTCGTGCAATACAGCTGCCATATTTGTGACCAACAATTTGCAAACAAGGAGGAATTTGTTCTTCATGAACAATTGCACGTCCCTGTAAATAACGTAACCACTCCAGTAAGAAGATGTGGTTACTGTCAAGCTACGTTTCACACGCGAAAAGAATTGCAAAATCACATAATGAAGTATCATGGTGGTCAAACATTATTTAAATGCAATATTTGTGACAAAGCGTATGAGAAATGGTCCAGTTTAGACGTTCACGAAGCCACGCATAGATTAGATAAACCCTTCCTTTGTGATTTATgtggaaaaagttttaagCACTCGAATAATTTAAGAGGGCACAAAAGAATTCACTTGGAGGAATCTAAAAAGAAACGTCATGTTTGTGAACTCTGCGGCAATGCATTTAGATCTAGATTTCATCTAAATGAGCATATGAATCAGCACAATGGTAATAAACCATATGGTTGCGAGCAATGCGGCAAGGCtttttacaaaagaatacAATTGCGCCAACATAAATTGTCCCatggattaaataaatttgcttGTCCAATTTGCGGCGTTACATTTAATCGCAGAGGGAACATGAATACGCATTTTAAGAGACACAGTACTCAAGATGGAGTATATACTTGTAGCGTATGCGAACATAGATGTAAATCAATgagtgatttaaaaattcacagaAAGGAACATTCCGAAGAAGACATAATGGAAAGTGTAAAGAAGAAAGCCATCGACAAGACAGTATGGCAGTGCAGAATCTGTGCTAGAGTATTTCTGAAACGTGCTATTTGGTTGAACCATGAACGATCACACACAGGTGAGAAAGTTAGTGTCGAGTGTGACGAGTGTGGGAAAAAATTAGCAAGCAAGAGTTCATTAACGTATCACAAAAAATCTATACACTCCTCAGAACGACCACATATGTGTCAATTTTGTGGAGATTCCTTCGTCTCCAAAGAGGCGAGATTGATACACGAACGTATTCATACTGGCGAACGACCTTACGTatgtaaaatatgtaacatGCAGTACAGATGTTCAAGTAATCTTAGTCAACATATGAAGATACATTCAGAAGCTAGGCCTCACGTATGTCCATATTGTAATAAAGGCTTCACACGTAAAGGCGCACTTAATGTTCACGAGCGTATTCATACTGGCGTTAAACCATTCGCGTGTGTCGTGTGTGGTCGAAATTTCTCGCAGAAAAATGATATGCTCAAGCATACGAAAACTCATCGTGTTAAATCAATTCGCTGCGAACAGTGTGATGAGGTGTTCGCGACCAAGAGGGAAATTCTTAAACACATTACAGTGCATGAACAAAATGTAGAGAGTTCTGTTATACAGCGATATGTGGACATGCCGCAACATGTAGAATCGTACTCAATAAATATACCTTATTCTAGTATCGAGGAATCCGATGAGTTGGAGATTGCACAGAATAATTAG
Protein Sequence: MKIVCASTTCKYASEEEDSTNVIFISFPNNDTSKLWAHNCSRLDLLSKSNEELHSNYYICSHHIEDHCFISKCKPITIAQGTVPTLFQMEPVIAPLTPVTSEKAPEYENQHSKDNIQSCDSSLNSMNNIDGTDNMALNTNFHARVLNHESVDEKSNTVTIFNRCVSSETSDNDALRYCDINTEIEQYSSVTIGFSSLCRICGDEASDGIEIFSAKGIELKLRYKIQLHMPISIDVEDIMPQRLCLNCYNKLEVTHSLVTTCLQTNMRFRRFLNIEGMAEYDKRFDALVEECSIEVDEEICGSDTTQSETISLVSKKNEESEAINKVECNLNKCSATADLEHTPIAQITAGGLNVNDVNKLKFTVDSTSEVHSDLSDLFHVFKGIKNKENECVIETVSEAQKIVHNKEESNLVCLLCKDTFKTVEIFENHKILCDDGDALDLKQQKESSHSDNLATQPASTIDYQFSMKSCDVCGKVFETEALLQDHEISCCQPFVQYSCHICDQQFANKEEFVLHEQLHVPVNNVTTPVRRCGYCQATFHTRKELQNHIMKYHGGQTLFKCNICDKAYEKWSSLDVHEATHRLDKPFLCDLCGKSFKHSNNLRGHKRIHLEESKKKRHVCELCGNAFRSRFHLNEHMNQHNGNKPYGCEQCGKAFYKRIQLRQHKLSHGLNKFACPICGVTFNRRGNMNTHFKRHSTQDGVYTCSVCEHRCKSMSDLKIHRKEHSEEDIMESVKKKAIDKTVWQCRICARVFLKRAIWLNHERSHTGEKVSVECDECGKKLASKSSLTYHKKSIHSSERPHMCQFCGDSFVSKEARLIHERIHTGERPYVCKICNMQYRCSSNLSQHMKIHSEARPHVCPYCNKGFTRKGALNVHERIHTGVKPFACVVCGRNFSQKNDMLKHTKTHRVKSIRCEQCDEVFATKREILKHITVHEQNVESSVIQRYVDMPQHVESYSINIPYSSIEESDELEIAQNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00252993;
90% Identity: iTF_00294664; iTF_00298504; iTF_01473352; iTF_00293904; iTF_00295440; iTF_01475633; iTF_00296978; iTF_00254517; iTF_00293143; iTF_01474874; iTF_01474108; iTF_00252253; iTF_00253759; iTF_00292415; iTF_00297737; iTF_00296202;
80% Identity: iTF_00293904;