Basic Information

Gene Symbol
ZBTB41
Assembly
GCA_030264185.1
Location
JASCRG010000463.1:117174-118514[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 6.7e-05 0.0055 17.4 0.3 1 23 91 113 91 113 0.95
2 12 2.9e-07 2.4e-05 24.8 1.9 2 23 120 141 120 141 0.98
3 12 5.3e-06 0.00043 20.9 5.8 1 23 164 186 164 186 0.95
4 12 0.00016 0.013 16.2 4.8 2 23 192 213 191 213 0.97
5 12 0.00062 0.051 14.4 0.1 1 23 218 240 218 240 0.98
6 12 4.5e-06 0.00037 21.1 0.9 1 23 248 270 248 270 0.98
7 12 0.038 3.1 8.7 2.0 1 23 276 299 276 299 0.94
8 12 0.00013 0.011 16.5 0.3 3 23 312 332 310 332 0.96
9 12 7.6e-07 6.2e-05 23.5 1.8 1 23 338 360 338 360 0.96
10 12 2e-08 1.6e-06 28.5 0.2 1 23 366 388 366 388 0.98
11 12 1.5e-07 1.3e-05 25.7 0.9 1 23 394 416 394 416 0.98
12 12 0.00035 0.028 15.2 1.7 1 21 422 442 422 443 0.96

Sequence Information

Coding Sequence
ATGATATTGTTAACTTTTACTTTCAGATACACCCATCTTCCATTCCCCGAAGAATATTACCCGATGGTAATGTTCGCCAAGCTCGACCTGGTGAAGAAAGATGCGGAGCAGACAGAGGTAGAGAGATTAAAGGATGACGAAGAGTCGAGGGCAACGAGGTCGTCAAGAGCGGCAAAAGCGTCGCGAGTGTCGGCGACGTCAAGTTCCGAAGCGAGTCCGAATGCTGATGAAATAAAGCAGGAAATCGAGGACGAGGATTTGCCGCTGGCCTTCCAATGTAAAACCTGCGGTGTCTTTTTCAACTCGCAGGGTCTCTTGGAGAATCACGAGATCGAGCACAAGGGTAAGCGGAAGAATACGTGCAATCAGTGCGGCCGTGTCTTTAGGACGTACGTTAATCTGCGAAAGCACATAAAGAAACACGCAGGACGAAAACGCAAGACCGTCGGGCGGCCTCTGAAGGtcaaaaaggaaaagtccGAAGTAGAGTTTCTCTGCAAAACTTGCAACAAGGTTTTTCGGCATAAGAGCAACTACCAAAAGCATCTGCTGCGGCACACCGTCGGCGACCTTACGTGCAAGCACTGTCCGaagaaatttcgattatttagGGACCTGACGCGTCACGAGAAGACTCACTTCTATCCGAGCTACATGTGCAAGGAGTGCGACTACGAGACGACGGTCCTCGCTGCCCTGAGCATTCACATGCTGCGACATACGAACAAGGCGGACCTTCCGTTCAAGTGCAACGAATGCGAGAAGCGATTTCGAAAGGCGATCGACCTCCAGGAACACTACAACATCCATTCCGGCGAGAAGCCTTTCGTCTGTCAGCTTTGCGGCAACGCGTTCTACCTGCGACGGCAGCTCTCGGCTCATTGTCGACGGATGCATCCCGAGATGAAGGCGAACAAGGTAACGAGCACTGCCTGCGACATCTGCGGCCGCGTCCTGGCGACGAAGCGCTCCCTCTTCCGGCACAAAGAAAGTCACAACCCAACGAAACTTTACCTCTGTGACTACTGCGGTAAGAGTCTCAGCAGCGCCGAGCACCTCAAGAAACATCGGCGCATCCACACCGGCGAGAAGCCCTACGTCTGCGACATCTGCGGCAAGGGCTTCACTGATTCCGAAAACTTGCGAATGCACAGAAGGGTTCACACTGGCGAGAAGCCCTACAAGTGCGACCAGTGTCCCAAGGCCTTCTCGCAGAGGTCCACTCTGACGATTCACAGGCGCGGTCACACCGGCGAGCGACCTTACGTCTGTCAAATCTGCCATCGTGGCTTCTCCTGCCAAGGCAACCTGACTGCCCATCAGAAGTCCACTTGTGTCTGA
Protein Sequence
MILLTFTFRYTHLPFPEEYYPMVMFAKLDLVKKDAEQTEVERLKDDEESRATRSSRAAKASRVSATSSSEASPNADEIKQEIEDEDLPLAFQCKTCGVFFNSQGLLENHEIEHKGKRKNTCNQCGRVFRTYVNLRKHIKKHAGRKRKTVGRPLKVKKEKSEVEFLCKTCNKVFRHKSNYQKHLLRHTVGDLTCKHCPKKFRLFRDLTRHEKTHFYPSYMCKECDYETTVLAALSIHMLRHTNKADLPFKCNECEKRFRKAIDLQEHYNIHSGEKPFVCQLCGNAFYLRRQLSAHCRRMHPEMKANKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICHRGFSCQGNLTAHQKSTCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00866161;
90% Identity
iTF_00770535;
80% Identity
iTF_00296198;