Crja008516.1
Basic Information
- Insect
- Cephus rjabovi
- Gene Symbol
- zfh1
- Assembly
- GCA_030264185.1
- Location
- JASCRG010000527.1:1947777-1952013[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0006 0.75 10.2 1.9 6 43 34 67 29 68 0.81 2 11 0.21 2.7e+02 2.0 1.1 17 28 75 86 70 99 0.82 3 11 0.27 3.4e+02 1.7 0.5 17 31 104 118 91 122 0.78 4 11 0.00017 0.21 11.9 1.1 8 29 124 144 117 154 0.80 5 11 0.00042 0.53 10.7 0.1 18 40 160 179 147 182 0.89 6 11 0.16 2e+02 2.4 0.4 18 29 188 199 182 207 0.83 7 11 0.11 1.4e+02 2.9 5.3 10 41 209 236 201 238 0.80 8 11 0.15 1.8e+02 2.5 2.6 4 29 231 255 228 265 0.75 9 11 0.0034 4.2 7.8 0.7 5 44 260 295 256 295 0.84 10 11 0.032 39 4.7 0.1 17 41 302 323 298 325 0.87 11 11 0.0014 1.8 9.0 2.8 15 43 328 353 323 354 0.87
Sequence Information
- Coding Sequence
- ATGGATGTCACTATAGTATTAGAGGGACATAAATCTGATCAACTTAGTAATATTGACTCCAGCGATAACCAACGTGTAAGAGTAGAGaaGCATTATAAATACAGCCATGAAACCGTCTCAGAAAAATCACAAGGTTGCAATGCATGTGgcaaagaattaaataatctaaaaGCTCTAAGGACTCACATTAAAATGAAACATGGAGGAAGTAACAGGCAAGGATTTCGCTGTCGCCTCTGTGAAGAGAAATTCCATACAAAAGAGGACAGAAAGCTTCATTATGAGAAAATCCATTGTGGAGAGAGTCCATTCATATGCATAGATTGTGGAAAGGGATTCTCTAGTAAATCAGGACTATATGGTCATCGACAACTTCACAAAAAAGACCAACAATCAACTTGCCAATATtgtggaaaaattttcaacAGGCGGGACAGCTATCACGAACATGTTCTTATCCATGTGGGTCCTCGGCATCGCTGTCCCTACTGTCCAAAAGAATTTGTGCAGCGTAGCAATCTCATACGTCATATACGAATTCACACAGGACAGAAACCGTATTCCTGCACCTTTTGCGAGAAACGCTTCTCCGACAAGGGTGCTTGTAATTCGCATATTCGGGTTCATACGAAGGAGGAGCAATGTGCCTGTTCATATTGTGGTCAAGTTTTCACCAAGAAACAAAAGTTGAAATATCATATTCGCAAACATACCGGGGAAGGTTTATTGAGTTGTGAGATTTGTGcaaaaacttttacaaataCTTTTGCCTTGAAGGAGCACAGAACTATTCATGATAGGCAAACACAAATGATGTGTATAGAATGTGGAAGAGCGTTTAGTAATCAAAAGTATCTAGAAAGGCACATGGCTACTGTACATCCTGGTCCTgaatctttatcttttatctgtCCAATCTGTGATAAAGTTTTTCATCAACAGTCCAGACTGAAatACCACATCGTAACGCATACtgagaagaaatattttgattgtgAACTCTGTGGAAAACGCTATAGCACCAGAAAGTCTATGCAAAATCATTTACGACGGTATCATGATCTCCAGAGTAATGGAGTGGAATATAAGAGTTCTAAAACTAGTATGCTCGAAGAAGTGGAATTGAAGACTACAGCAGGTGTTGATTGGATATCAAAAAAAGATGGATTAGTTGCTGAAAAGCTGCTTAATGGAAAGTGTGAGCAAGATGAAATTGGAACGCCAGACGATGCGCAATCTGTTAAATTTGCCATTTCTAGGACAGTGAGAGTCGTTCATATCTCTTCTAGCCTCGATATTGCCACTTTACAGTCGCTCATTAAAGCAGAAAAGCCCCAGACTCAAACTACAAGCTCAAACAAAGCAAAGGGTGAATCCTTTTCAAAAGCTGCTAACTAA
- Protein Sequence
- MDVTIVLEGHKSDQLSNIDSSDNQRVRVEKHYKYSHETVSEKSQGCNACGKELNNLKALRTHIKMKHGGSNRQGFRCRLCEEKFHTKEDRKLHYEKIHCGESPFICIDCGKGFSSKSGLYGHRQLHKKDQQSTCQYCGKIFNRRDSYHEHVLIHVGPRHRCPYCPKEFVQRSNLIRHIRIHTGQKPYSCTFCEKRFSDKGACNSHIRVHTKEEQCACSYCGQVFTKKQKLKYHIRKHTGEGLLSCEICAKTFTNTFALKEHRTIHDRQTQMMCIECGRAFSNQKYLERHMATVHPGPESLSFICPICDKVFHQQSRLKYHIVTHTEKKYFDCELCGKRYSTRKSMQNHLRRYHDLQSNGVEYKSSKTSMLEEVELKTTAGVDWISKKDGLVAEKLLNGKCEQDEIGTPDDAQSVKFAISRTVRVVHISSSLDIATLQSLIKAEKPQTQTTSSNKAKGESFSKAAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00254496;
- 90% Identity
- iTF_00254496;
- 80% Identity
- iTF_00296986;