Crja016250.1
Basic Information
- Insect
- Cephus rjabovi
- Gene Symbol
- -
- Assembly
- GCA_030264185.1
- Location
- JASCRG010008722.1:11430-11996[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-13 2.9e-09 36.6 0.1 3 51 53 98 51 99 0.91 2 2 5.8e-11 2.6e-07 30.3 0.0 19 51 136 170 134 171 0.90
Sequence Information
- Coding Sequence
- ATGTCATCGATAGCAGAACTGTTAGCAGAATTCTCTCCAGAAATGACACCAGAAAAGACGacagaagagaagaagaaaactcCAAAGAGACAGAAGAAGTCCACCAACCTGGTCCAAGTGGCGGCTCAGACGGCACAAATACCATTGAAAATGTCTCTGGGAGGTGGAAAGTATGCAGAACTCACCGAATGGAAAGGCAGCAAGAGAGTGGACCTTAGATTTTGGGAGACCGAAACGATACCATCCAAGACTGGAGTGAGTTTATCGCTGATCCAATGGAAGACTCTATGCAACATGGTCGATACCATAGATGACCTGGTGGCCAAACTAAAGGACAGAGAACCGGTGGACTGGAGATGTCACTTGGGAGACGATGTGTACGTGGTCATTCAAGCTCCTAACCGATGTATTCACGTCAGAAAGCATTTCGTACCAGAAGGTGAATGGACGATGGTTCCGACCAAGAAAGGTGTGACGCTGAGCATGTACCAATGGGAAGAATTGAAGAAGACGATCCCAATATTTGAAGAGAAAGAACCTGAACTGAAGACATTGAACATGTGTTAA
- Protein Sequence
- MSSIAELLAEFSPEMTPEKTTEEKKKTPKRQKKSTNLVQVAAQTAQIPLKMSLGGGKYAELTEWKGSKRVDLRFWETETIPSKTGVSLSLIQWKTLCNMVDTIDDLVAKLKDREPVDWRCHLGDDVYVVIQAPNRCIHVRKHFVPEGEWTMVPTKKGVTLSMYQWEELKKTIPIFEEKEPELKTLNMC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00252829;
- 90% Identity
- iTF_00252829;
- 80% Identity
- -