Basic Information

Insect: Cephus pulcher
Gene Symbol: Hr39
Assembly: GCA_030142455.1
Location: JARQTB010000753.1:187635-191122[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.1 7.6e+03 -3.9 12.8 50 164 194 318 180 362 0.60

2 5 0.64 4.4e+03 -3.1 1.7 84 125 348 396 321 436 0.41

3 5 5.5e-08 0.00038 20.2 0.0 1 21 518 538 518 542 0.92

4 5 0.84 5.7e+03 -3.5 0.0 89 113 576 600 557 607 0.53

5 5 7.2e-70 4.9e-66 224.0 0.0 202 408 702 903 677 903 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.1	7.6e+03	-3.9	12.8	50	164	194	318	180	362	0.60
2	5	0.64	4.4e+03	-3.1	1.7	84	125	348	396	321	436	0.41
3	5	5.5e-08	0.00038	20.2	0.0	1	21	518	538	518	542	0.92
4	5	0.84	5.7e+03	-3.5	0.0	89	113	576	600	557	607	0.53
5	5	7.2e-70	4.9e-66	224.0	0.0	202	408	702	903	677	903	0.95

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCCCGGGCTGGTGGCCTCCGGCACAGTCCTGGAAGTCATCTTCGTTGGGCGCACGCACCGAGGCTGGGAAGAACGTTTCCGTCACTACGATTAACGTGCCGCCGGCCCATGAGATGCATGACGGTAAGAGCGTCTGCAAGTATCTGGGTGGACAGAATGGCGTGACGGTTTCAGTGGTGTCCAGCTGCGGATCAGCTTCCGCTTCTGGGTCCAGTAATGTCGTCGGTACCGGAAACGCTGGCGAGTCCGGTTCCGTGGAGGACGTTGAAGACAGTGACGGTGAGGTGAGCAAGATCGACTTCCGGGGTGTTAATCTGCGCACGAAGAAGAAACGGGATGCTTCCGGCGGACAAGAAAGTGAGAACAGTGCAATTGGCACTGACAATATTCAGCAGCAACCCGAAAGGCCAATGTCTTGGGAGGGTGAACTCTCGGACCAAGAAATGTCTTCCAATACTATCACGAACCAGGACCACGAAGAAACGTTTATGGAGGGTGTACAAGTGTGCAGTGCGAGTCCTGGACCACAGGAACAAAAGTTTCCAATAAAACCGGAGCCGGACTTTAGGTCAAGTCCAGGACTCGCTTTGGGCTCGCATAATGAGACGGCCTTGCCCCTTACTCATGCTCAGCAactgcagcagcagcaacagcaacaacagcagcagcagcagcaacaacgtGGTCTGGACGGTCTTGAACAGACACAGCAGAGCGACCTACCCTTGCTGGTTGGCAAACTCCTAGGGGGTTATAATAGTTCAACCCCGAATCACAGTCCTGTACTAAATCCCCGGCATCATCTTACTAAGCACAGTCACACCCGGTCTCAAGTCCCTTCGCCGGATTCGGCGATTCACTCGGCCTATAGTGTCTTTAGCTCTCCCACGCAGAGTCCTCACGCGGCACGGCACTCTGCACTAGGTGCTGGCAGTCCTGTACCATCCTCATCGCTGTCACTTTCGCGACACAGTTTCAATAATTCCACGTCTTCGTTAtccttgtctctctcgcactctctaTCGAGGAACAATTCGGACGCCTCCAGTAGCTGCTACAGCTACGGATCCCTTAGTCCGCCGACACACTCGCCCGTCCAGCAACCGAGGCATTCCCAtccgcagcagcagcagcatcatcAAGTCACTCAGGGCAGTCCTTTGCATCTACCCGCAGCCACCGGTGCCACTCATCATTATTCCACCCCGGGATCGGAACTCTCGGAGGGTCTCGCAGAGGACCAAGAAGACTGTAGGATAGCGCCGGCACCCTCGGGCATCTCCACGAGGCAGCAACTTATAAATAGTCCATGTCCTATATGCGGCGACAAGATCAGCGGCTTCCATTATGGTATATTCTCCTGCGAATCCTGTAAGGGATTCTTCAAGAGGACCGTACAGAATCGTAAGAATTATGTCTGCCTACGTGGCGCGGGATGCCCCGTCACTGTCGCCACTAGGAAGAAGTGTCCAGCGTGCCGATTCGACAAGTGCCTGAATATGGGAATGAAGCTGGAAGCGATAAGGGAGGATAGGACTAGAGGCGGTCGCAGTACCTATCAGTGTACCTATACTTTACCAGCTAACCTTATCGGCGGGCCTGCTGGTGGCATTTCCGGTGATAAAATCACCGGTGGTACCTGCAGTCCAGCACCGCCGGGATCGGAGCATCATCACTCAATGAGACATCATTCAAATCATTCGCACAAGCTGCAAATGGTGCCACAGCTCCTACAGGACATCATGGACGTGGAGCATCTCTGGCATTACAACGACAATGATCGTATGACTAGTGGCCAGGGTAGTGGTATCAGTGGTGGTAACGGTAGTGGTAGCGctggcggtggcggtggtggtggtagcgGTAGCGTTAGTGGTGTCAGTGGTAGTGCTAGTGGCGGTGGAAATTCATCCGGAGGCGGAAGTTCATCCGCCGTCGGAAGTAACGGGAACATACCTGGAGGAGAATCGTCGAGACCAAGTTCCGCGGGTCCTCCATCCTCCAATCACGAACAACATTCACCACCGGCGAGTACCCCTAACTCGAATTCAACCTCCAATCCTAATGGGAATCCCACGCAGCATCCGGACTTTCTTTCAAATCTGTGTAACATCGCCGATCATAGACTCTACAAGATCGTCAAGTGGTGCAAGAGTCTACCGCTCTTCAAGAACATCTCCATAGACGATCAGATATGCCTTCTCATCAACTCCTGGTGCGAACTCCTCTTATTCTCCTGCTGCTTTCGCAGTATGAGTACGCCTGGCGAGATCAGGGTGTCCCTTGGCAAGTCGATAACTCTCGAACAGGCGAGACAGTTAGGTCTTGCGACGTGTATCGAGAGGATGCTGGCCTTCACAAATAACCTTAGACGACTCAGGGTGGATCAGTACGAGTACGTGGCGATGAAGGTCATAGTTTTGCTAACCTCGGACACCAGTGAACTGAAAGAACCCGAGAAGGTAAGAGCGTCCCAGGAGAAGGCTCTTCAGGCACTGCAGCAGTATACAATCGCAAGGTATCCCGAGATGCCGGCAAAGTTTGGAGAGCTGCTACTCAGGATCCCGGACCTGCAGAGGACCTGTCAGGCCGGGAAGGAGTTGCTCAGCGCAAAGCGTGCCGAGGGCGAAGGCAGCTCTTTCAATCTACTAATGGAACTTCTACGAGGCGATCATTGA
Protein Sequence: MSEQNGPTEGPGPGWWPPAQSWKSSSLGARTEAGKNVSVTTINVPPAHEMHDGKSVCKYLGGQNGVTVSVVSSCGSASASGSSNVVGTGNAGESGSVEDVEDSDGEVSKIDFRGVNLRTKKKRDASGGQESENSAIGTDNIQQQPERPMSWEGELSDQEMSSNTITNQDHEETFMEGVQVCSASPGPQEQKFPIKPEPDFRSSPGLALGSHNETALPLTHAQQLQQQQQQQQQQQQQQRGLDGLEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHPQQQQHHQVTQGSPLHLPAATGATHHYSTPGSELSEGLAEDQEDCRIAPAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGPAGGISGDKITGGTCSPAPPGSEHHHSMRHHSNHSHKLQMVPQLLQDIMDVEHLWHYNDNDRMTSGQGSGISGGNGSGSAGGGGGGGSGSVSGVSGSASGGGNSSGGGSSSAVGSNGNIPGGESSRPSSAGPPSSNHEQHSPPASTPNSNSTSNPNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00676835;
90% Identity: iTF_00770401;
80% Identity: iTF_00295339;