Cpul003860.1
Basic Information
- Insect
- Cephus pulcher
- Gene Symbol
- -
- Assembly
- GCA_030142455.1
- Location
- JARQTB010000404.1:10993-11343[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8 4.4e+03 -2.3 0.0 34 43 14 24 10 26 0.73 2 2 9.9e-10 1.1e-06 28.4 0.1 6 38 28 59 23 65 0.89
Sequence Information
- Coding Sequence
- ATGACTCATGTATTAGTTAATCATTCAAGAAAAACTAAACAGAATAAAGTTAAAAGGAAGAATTATTCTTCTGAAAGTGTTGAGAATGCTTTAAAAGCTTTGGATACCGGCATCTCTATCAGAAAAGCTGCTGCTGCGTATGGAATTCCAGTAGCGACACTTGCGAGGAGGAAAAATGATCCTGTTGAATTCAAAACAAAACCAGGACCCGATACAGTTTTATCAAAAGCTATTGAGCAAGATATTGTTAATTTGATTCTCTACAAAGCTGAACGAGGCCAGCcagttaataaaaatgaagggGATAGCCACACCGTTTCTTCACAACCGTCCTGGGCGACATTGGTTTGA
- Protein Sequence
- MTHVLVNHSRKTKQNKVKRKNYSSESVENALKALDTGISIRKAAAAYGIPVATLARRKNDPVEFKTKPGPDTVLSKAIEQDIVNLILYKAERGQPVNKNEGDSHTVSSQPSWATLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00296695; iTF_00254244;
- 90% Identity
- iTF_00296695;
- 80% Identity
- -