Basic Information

Insect: Cephus parvus
Gene Symbol: salm
Assembly: GCA_030142435.1
Location: JARQTA010000790.1:364084-374016[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.2e-06 0.00059 20.5 0.9 1 23 497 519 497 519 0.98

2 9 1.4e-05 0.0012 19.5 2.1 1 23 525 547 525 547 0.98

3 9 0.09 7.4 7.6 3.8 2 23 1010 1031 1009 1031 0.98

4 9 6.2e-08 5.1e-06 27.0 0.6 1 23 1037 1059 1037 1059 0.97

5 9 8.6e-05 0.0071 17.1 2.6 1 23 1069 1091 1069 1091 0.98

6 9 0.003 0.25 12.2 1.9 2 23 1506 1527 1505 1527 0.97

7 9 0.038 3.1 8.8 0.9 1 14 1533 1546 1533 1548 0.92

8 9 1.5e-06 0.00012 22.7 2.1 3 23 1755 1775 1753 1775 0.96

9 9 2.9e-07 2.3e-05 24.9 0.9 1 23 1781 1803 1781 1803 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.2e-06	0.00059	20.5	0.9	1	23	497	519	497	519	0.98
2	9	1.4e-05	0.0012	19.5	2.1	1	23	525	547	525	547	0.98
3	9	0.09	7.4	7.6	3.8	2	23	1010	1031	1009	1031	0.98
4	9	6.2e-08	5.1e-06	27.0	0.6	1	23	1037	1059	1037	1059	0.97
5	9	8.6e-05	0.0071	17.1	2.6	1	23	1069	1091	1069	1091	0.98
6	9	0.003	0.25	12.2	1.9	2	23	1506	1527	1505	1527	0.97
7	9	0.038	3.1	8.8	0.9	1	14	1533	1546	1533	1548	0.92
8	9	1.5e-06	0.00012	22.7	2.1	3	23	1755	1775	1753	1775	0.96
9	9	2.9e-07	2.3e-05	24.9	0.9	1	23	1781	1803	1781	1803	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGATGGAGCATCACACGGCGACTCGAGAGCCGCAGTAACAAGCAGCGTCGCGACATCAAGATCTGTCAGGCCGAACGTACTACTTCGCCTGGGTCCCGTGATATCGCCTACTCTCAGTATTCCGGGGAAGGAATCGAGTCCGGGTCAGACGGAGAAGAAAGTGCTGGAGGAGGCATCGTAGGAGGGGTAGAAGGaagtggcggtggtggtggtgttgGTGGCGGTGAAGTAACAGGAGGTCCAGTCGACGAGGCCGTAGACCTTAGGCGATCTCATCATGGAGAGGAGGATGAGAGGGATCGAGAGGATTTGCCAATggacgaggacgaagaggacgaggagggtGTCGAAGATCCAGGGGAtcaggacgaggaggaggaaggaacGCGAAAGCAGGTGATGCGACATCGTCAGGATGCGGAGAACAACAACAGCTTTGTCGAAGGTGGACCACCAAGTGGGATCTTCGGTCCACCTGGAGCAAGTCACGTGACCCTTGAGGCCCTTCAGAATACGAAAGTCGCCGTGGCGCAATTCGCAGCCACCGCGCTGGCTGGAGGTGCCGACAGCGAGGCGGCCCTCCAGGACTTGGCGCTGCTTCAGAGTACTCTCTACACCCTCCAGCATCAGCAGGTCTTCCAGTTGCAATTGATAAGTCAACTGCAGCAACAGCTCTCGATAACGCATGGTCAGCCGACGGTTCCGGGAACTCCAACTGGAACAGGGCTACCGGGTACGGGGGTGACTTCGACGACAACGACAAGTACGACAACAAGCACTAGTCATCCAGGTACTCCGTTCGGCAATGTCGGAGGTGCGGGTAGCGCTATCGGTAGTGGTACCAGTGCTGGCATTGGAGGTGGTATTGCACGTGTCGGTAGCGGTATGGGAGGTGCTGCTTGCGTTGATACTCGTGACATATCGTCGTCAACAGACAACAAGGAAGCTTCACCCTCGCCAACGATTCACCCGAAGCCTCTCTCGGCCCTGACTTCGCCGCCGTCCTCCCGGCCACCGAGCCATCATCGACAGTCATCGCCGGGACTACTCCAGTCACAGAGTCAAGAACGAGGCACTCCCTCAGCCAGTGGCGCTGGTAGTGGCGGCAGTACATCGCCATTGAGTCTACCGCTGCCGTTGTCGCTCTCGCTTCCGTCGTCGGCAGCAGCGGCAGCGGCGGCGGCCGCCGCAGCCGCAGCAAGTCAAATGTCCCTCTCCCACCAAATGCCGCCTCTCTGCTCGATAAGCTCCTCACTGGCCTCGTCGATCATCACAAACACGGACCCGCCGCCCCTTCACGAGCCCAACACCCTGGAGATGCTACAGAAACGAGCGCAGGAGGTGCTCGACAATGCGAGTCAGGGCCTCCTGGCGAACAATCTGGCCGATGAGCTCGCGTTCAGGGGCGGCAAGGGCTCACGACTGTCACCCTACGATTCGAAGTCCTCCGGTGGGCGCGGCGAGCCCTTCTTCAAGCACCGCTGTCGCTACTGCGGCAAGGTCTTTGGCAGTGATTCGGCGCTCCAGATTCACATCCGGTCCCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAGTTTCCACACGTTAAGATGAATCCGAATCCCGTGCCCGAGCACCTTGACAAGTACCATCCCCCCCTTCTCCAGCAGCTCGCGGCTTCCGGGCAAAGGCCCTTACCGTCcccgccaccgccaccgccgccgccgccgccccCGCCACCGCCAgcgtcgtcctcctcctcctcgtcgtcgtcgccatCATCGTCGTCGCATCATCCGTCGTTGTGTCACCCTGGCtccgcagcagcagcagcagccgcggccgccgccgccgccgcagCGGCTCATGGTTTCCTTCCACCTCAGCCACCGTTACCTCTTGCTCTAACCCTCCCTGTAATGCCACCCCTTTACCGATCACCCCTCCTTAATCACAGGGAGGAACAAGAGGTTCCGGAGAATCTCAGTAAGACCACTGTCCCGTCTCCTCACACATCGCCTCCTGTTCCAACGGGACATCATCATCTCCCTTTACCCAGTTCCCATCATCCTCACCTTCACCATCAATCGAACTCGCATCATTCCTCCTTTCACGAGCATCATCCGATgaaacagcagcagcaccTGCATCATCATCACGCTCAACAACAACATCATCTCCATCATCACGAGCAGACTACCTCGATAGCATCCTCGGCCGCGCAAAGAGACGAGATTAAACTAGAGCACCAGTCACCTACTCAAGACTCCTACCAACAACAATCACGACCAATGAGTCGGGAGGATTCCGAGAGGATAACGCCGAAGCGAGAACCAGAGGATACCGAGGAGCAACCCGAGGACGAAATAGAGGAGTACGAGGATAGTACCCGGAGGTACCTGAACAACTCGTCACCATCCTCGACGGCGAATCCTCCGTCACAACCACAACCTTACGAGGACTGTAGTATGGACAGTAGTAAGATGAGTGCCCGACTTGAGGCCGAAAATGAAATGGACGGGGACGGGGATGAAGAGATGGAAGAACAGCCAGAGAACCTCTCAGGTCGCGGTACTTCGAGTAGACTTGGTCATCAGAGTGTCGGCTATCCTGGTGCCTCTCCCGCAAGCAGTAGTGCCAGTAGCAGTAGCCTCCAAACGACCTTCGCGGGAATTTTATTTCCCACGGGGCCACCACTACCGCCAGTGACTTCGTCCTCCGCCTCGACGATTCATCATCCTCAGCTGATTCACCACGTCTCGTCCAGTGGTGGTGGCACTACTCCCACCGCACCTGGATGTGAAATGATCGTCGATCCTGCCCGCGATCCTGCCATATACTCGAGCCTACTTCCACGACCGGGGAGCAATGACAACTCCTGGGAGAGTCTTATCGAAATTACCAAAACCTCGGAGACGTCGAAGCTTCAGCAGCTGGTTGACAACATCGAGCACAAGTTGACAGATCCTAACCAGTGCGTCATCTGTCACAGGGTACTCTCCTGTAAGAGTGCACTCCAGATGCACTATCGTACTCATACAGGCGAACGGCCATTTAAGTGCAAAATATGTGGCAGAGCCTTCACCACCAAAGGCAACCTTAAGACTCACATGGGGGTGCATCGAGCGAAACCACCCCTCAGGGTGCTTCATCAATGTCCGGTATGTcacaaaaaattcacaaatgcCCTGGTACTTCAGCAGCACATACGACTTCATACGGGCGAACCTACGGATCTGAGTCCGGAACAAATTCAGGCGGCTGAAGTTAATGAATTTCCACCTGGCTACCCACATCATCCTCTGGCGTCGTTTCTCCCCCAGGGATTCCCGGCGCTTCATCCAGCAGGGAGTGGGTTCCCCTTGGGGTTCCCAGGTTCTCGCCAGCACATAGCCGAAAGAACTCCTCATGAGAACGACCTCGACTCGAAGGACTCTCGAGAACATCTGCATCATCCTCTTCTTCCCTCTCATCATCATCTCTCGCACCAACAGAATGCTCAGCATCACTTGCAACTGCATCAGCAACACCAAAAGTACTCGGAAGAGCGGAGCTCCACCGCAGGTGATGACGAAATGGCTGAAGATCAAGAAGAGGAGGATGACATCAATCGAGAAGATGATGAGAGGTGCGATGAACGGGAGAGGCGAAGTATGGAGGAGGCTGAAAATGATCCGGAGAGAGATGAAAACGAAGAggagcatcatcatcatcttcatcatcatcatcatcagcaacagcaacaacggCTGTCGCTACCAAGCTTTTCGACGTCTCTGGCGGCCCTCGAGAATCAGGTGCGAACGATCACGACGACAGTGGCTGGTGGTAGCTCCAGGTCACCTGGACCCCACCGATATAACGGAAGTGAAAAGAGCACCAGTCCCCCGGCGATACGAAATGGAAGCGGCGGTGTTCCGCTTGACCTGACCCCACGCTCTTCCTCGACCCCGGTGGGTGGCTCGACGCCTACCCCGACGCCGCCGTCCCCACCGACAGCAGGAGCATCCTTGGCATCGCCATCCGCCTCGTCACAGAGCACAGCGCATCACGCGCATGCTTTCGGAATGTTCGCAGGCCTTCTTAGGGCGGTCTCATCGCCACCGTCGAGTCTCGGTGGTGGCGGCGCCAGCGGCATTGGCGGTAGCAGCACCAGCACTCCCAGCCTATCCGGTACAACGTTAAACAGCGTAGTCTCGATGACCGCTGGGAATCCAGTCCTCGGCGAAGGCGTCGGTAGCGTCGTTGGTGTCAGTGGCGTCGGCGGTGTCGGTGGCAGTAGCGGCGGCGGGGGCGGTAGCggtggtggcggaggtggcggTGAAGGTGCAGGTAGCAGCACTACCGCCACCACCGGAGGAGCACTTGCCTCTCTAACGACGTCAGCCGTTCTCGCTGCCACTTCTACCTACAATCCCCTCGGCCTGGCTGTCGGAGGGCCAGCAGTCCGCGGTAACACGACATGCAATATCTGTTACAAGACGTTCGCTTGTAACTCGGCCTTGGAGATTCACTACCGGAGCCACACGAAGGAACGACCGTTCAAGTGCACCATTTGCGACCGGGGCTTTTCCACGAAGAATGAACGCGAACCCTGGTTGACGAATACGTGTACCTGTGTCGATCGGAGGATCTCCCTATCCAAGACCGGCACCGAGTCCACTAGCACCACTAGCACGACTAGCACCACTATCACCAACATCCCTTCGTCCGAGTCGCATGGCGGCAATCGGACGAGGCCGAAACGCAGGCGGCGACGTCCTGAGGAGAGGAAGCCCCGGGGGCGGACTGGTGGCAACGAATGGGGGCGGGGAGTGATCTCTGGCTACGCTGCTCTCCACCTGCCCCCGATGCTGCCTCCCGCCCTCGGACTTCTCGCCTCGGACCACGTCTTCCTGGGAAACATGAAGCAGCACATGCTCACACACAAGATCCGGGACATGCCGCCTCACCTCTTTGCCGACGCGAAACAGACGggtcagcagcagcagcagcagcaaccaCAGCAGCAGGATCATGAGAACTCGAGGAGTCCCATGTGTGCGGATGAGTCGAGTCTACCACCTCCagcacctccaccaccaccaatgCCACCGTCGTCCGTGGAAGCTGTAGCAGCAGCCGCGGCGATGCCTGTCAAGAGATCACCGCCCGAGGGTGATTTACCTGCGCCCAAGAGGCCGCCCAGCATGCCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCTTCGGCGCTCCAGATCCATATGAGAACACATACGGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAACCTCAAGGTGCACATGGGAACTCATATGTGGACGAacggagcgtcgcgacgaggTCGCCGAATGTCATTGGATCTACCGCCACTGCCCATCACACCCAAGGACTCAGAGTTTCTTCAGCGACGACCGGATCTCTTTTATCCTTATCTACCCGCGCCGTTCCTTAATGGCGTTCAGCAAAAACTGAACGAGATCTCGGTCATACAAAGTAACAATGGACTAACGTCGCCACACAGCGCAAGTGCAGCCAAGTACGCTGGTCTCTTTGGATCGGTCTATGGAGGCGTCGctggtggcggtggcggtgcTGGCGGTGGCGCCGGAGGTGGCGGTATCGCTGCGGGATTCCCTGTTGACAAGCAGCCGATGGCACCGAGTAACGGCTCCCTAGGAGAATCGAAATCCCTATCAGCAGGGTCCATGCTCTTCCGGACACCGTCTCCATCTCATTCACCCGGCACTCCGTCGTCGAACACCGGCAATCAGAATTCCGCCAGTGTACCATCCTGGGGAGGTAGCGATCCGCTGCAGCACAGATTCGAGCGTGAAACTTCGTCCAGGACGGAGGAGAACGCGACCCCGCCAACGGCAAGACTACCACCTACACCGGCGCCAAGAGGGGAAGGTCTGGCAGCCTAG
Protein Sequence: MQLMRWSITRRLESRSNKQRRDIKICQAERTTSPGSRDIAYSQYSGEGIESGSDGEESAGGGIVGGVEGSGGGGGVGGGEVTGGPVDEAVDLRRSHHGEEDERDREDLPMDEDEEDEEGVEDPGDQDEEEEGTRKQVMRHRQDAENNNSFVEGGPPSGIFGPPGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQPTVPGTPTGTGLPGTGVTSTTTTSTTTSTSHPGTPFGNVGGAGSAIGSGTSAGIGGGIARVGSGMGGAACVDTRDISSSTDNKEASPSPTIHPKPLSALTSPPSSRPPSHHRQSSPGLLQSQSQERGTPSASGAGSGGSTSPLSLPLPLSLSLPSSAAAAAAAAAAAAASQMSLSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSSGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPPPPPPPPPPPASSSSSSSSSPSSSSHHPSLCHPGSAAAAAAAAAAAAAAAHGFLPPQPPLPLALTLPVMPPLYRSPLLNHREEQEVPENLSKTTVPSPHTSPPVPTGHHHLPLPSSHHPHLHHQSNSHHSSFHEHHPMKQQQHLHHHHAQQQHHLHHHEQTTSIASSAAQRDEIKLEHQSPTQDSYQQQSRPMSREDSERITPKREPEDTEEQPEDEIEEYEDSTRRYLNNSSPSSTANPPSQPQPYEDCSMDSSKMSARLEAENEMDGDGDEEMEEQPENLSGRGTSSRLGHQSVGYPGASPASSSASSSSLQTTFAGILFPTGPPLPPVTSSSASTIHHPQLIHHVSSSGGGTTPTAPGCEMIVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPHHPLASFLPQGFPALHPAGSGFPLGFPGSRQHIAERTPHENDLDSKDSREHLHHPLLPSHHHLSHQQNAQHHLQLHQQHQKYSEERSSTAGDDEMAEDQEEEDDINREDDERCDERERRSMEEAENDPERDENEEEHHHHLHHHHHQQQQQRLSLPSFSTSLAALENQVRTITTTVAGGSSRSPGPHRYNGSEKSTSPPAIRNGSGGVPLDLTPRSSSTPVGGSTPTPTPPSPPTAGASLASPSASSQSTAHHAHAFGMFAGLLRAVSSPPSSLGGGGASGIGGSSTSTPSLSGTTLNSVVSMTAGNPVLGEGVGSVVGVSGVGGVGGSSGGGGGSGGGGGGGEGAGSSTTATTGGALASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNEREPWLTNTCTCVDRRISLSKTGTESTSTTSTTSTTITNIPSSESHGGNRTRPKRRRRRPEERKPRGRTGGNEWGRGVISGYAALHLPPMLPPALGLLASDHVFLGNMKQHMLTHKIRDMPPHLFADAKQTGQQQQQQQPQQQDHENSRSPMCADESSLPPPAPPPPPMPPSSVEAVAAAAAMPVKRSPPEGDLPAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLTSPHSASAAKYAGLFGSVYGGVAGGGGGAGGGAGGGGIAAGFPVDKQPMAPSNGSLGESKSLSAGSMLFRTPSPSHSPGTPSSNTGNQNSASVPSWGGSDPLQHRFERETSSRTEENATPPTARLPPTPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00298578;
90% Identity: iTF_00253834;
80% Identity: -