Basic Information

Insect: Cephus parvus
Gene Symbol: gtf3a
Assembly: GCA_030142435.1
Location: JARQTA010000943.1:215602-220553[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.5e-05 0.0028 18.3 0.1 2 23 929 950 928 950 0.97

2 17 6.8 5.6e+02 1.7 0.4 1 19 956 974 956 977 0.90

3 17 0.83 68 4.6 1.3 2 23 983 1004 982 1004 0.95

4 17 0.00011 0.009 16.8 1.2 3 23 1013 1034 1012 1034 0.98

5 17 0.0052 0.43 11.5 2.1 1 23 1041 1064 1041 1064 0.95

6 17 0.00013 0.01 16.6 0.7 1 23 1070 1093 1070 1093 0.94

7 17 1.7 1.4e+02 3.5 2.5 2 23 1101 1121 1101 1121 0.94

8 17 1.9e-07 1.5e-05 25.5 2.1 2 23 1127 1148 1126 1148 0.97

9 17 4.1e-06 0.00033 21.3 0.3 1 23 1154 1176 1154 1176 0.99

10 17 0.00085 0.07 14.0 2.1 2 23 1188 1210 1187 1210 0.95

11 17 0.011 0.87 10.5 2.5 1 23 1216 1239 1216 1239 0.96

12 17 0.081 6.7 7.7 5.6 2 23 1261 1283 1260 1283 0.95

13 17 0.00071 0.058 14.2 1.0 2 23 1290 1312 1289 1312 0.96

14 17 0.00041 0.034 15.0 2.8 2 23 1320 1341 1319 1341 0.96

15 17 0.0016 0.13 13.1 2.3 1 23 1347 1370 1347 1370 0.96

16 17 0.44 36 5.4 3.2 2 23 1377 1398 1376 1398 0.96

17 17 0.013 1 10.3 2.6 1 23 1404 1426 1404 1426 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.5e-05	0.0028	18.3	0.1	2	23	929	950	928	950	0.97
2	17	6.8	5.6e+02	1.7	0.4	1	19	956	974	956	977	0.90
3	17	0.83	68	4.6	1.3	2	23	983	1004	982	1004	0.95
4	17	0.00011	0.009	16.8	1.2	3	23	1013	1034	1012	1034	0.98
5	17	0.0052	0.43	11.5	2.1	1	23	1041	1064	1041	1064	0.95
6	17	0.00013	0.01	16.6	0.7	1	23	1070	1093	1070	1093	0.94
7	17	1.7	1.4e+02	3.5	2.5	2	23	1101	1121	1101	1121	0.94
8	17	1.9e-07	1.5e-05	25.5	2.1	2	23	1127	1148	1126	1148	0.97
9	17	4.1e-06	0.00033	21.3	0.3	1	23	1154	1176	1154	1176	0.99
10	17	0.00085	0.07	14.0	2.1	2	23	1188	1210	1187	1210	0.95
11	17	0.011	0.87	10.5	2.5	1	23	1216	1239	1216	1239	0.96
12	17	0.081	6.7	7.7	5.6	2	23	1261	1283	1260	1283	0.95
13	17	0.00071	0.058	14.2	1.0	2	23	1290	1312	1289	1312	0.96
14	17	0.00041	0.034	15.0	2.8	2	23	1320	1341	1319	1341	0.96
15	17	0.0016	0.13	13.1	2.3	1	23	1347	1370	1347	1370	0.96
16	17	0.44	36	5.4	3.2	2	23	1377	1398	1376	1398	0.96
17	17	0.013	1	10.3	2.6	1	23	1404	1426	1404	1426	0.98

Sequence Information

Coding Sequence: ATGAGTGTCTCTGAGGAGACTACTGTATATCTCCCCTATGGGGATGTGGAAGCGGAGGATCCTGCTAAAGGTAAATTGGATGAAGCTTGTATCTATGCTGGCGACGAGAAAATGCAAGAGAGTGACACTGTGGAGCCTGAAGTTAAAAATTCTACCAAAGATGGTAAATCTCAGTCAACCCAGGAGAAATCAACTGTCTCAGAACAGTCTAACCGAGAGAAATGCAAACCCTTGGGCAAGAATTCACCGTCACCTATAAGCGGTTCGGACGCATCAATACAGCCAAGTTTGCAAAGCGATTCCTTATCGAAGAATACTTCATCGAAAGTGCCATCTGCTAAACAAGTAAATGTTGCACAGACATCGAGCACCAAGAATCTAgGTCGTAGACGAGAATCACAAGCTGATTACAGTAAAGCTTCAAGTTCGATGTCTCCAGGACGTTCTGCTAATGTTACTGTACCTAATAATGTGGAAAAGATAACATCGCGACGGAATTCTAAGGTAAATAACGCCGAAACTGAAACTGCAAATCTAGAATTACATCATAGTGGAGATCAAGAGAAATTATTAAGTACCGACGACAATATTAATCCTATACCACAAGAGAAGATTTctgcaattaaaacaaataaattaacaactACCTCTCAAGAGAAATCGGTAtgtcaaataaaaactataaatgaTTTGAAGAAGGCAACACCACGAGTCAAATTCCTTACGGATGAGCCTAAGAGCTTGACTGAATTCAGGAAGTTACATCCATCTAACACAACAAGCCCACCTACGCATTCAATCAAAAAAACAGTACAAACTAAAGCATTGATACTGGAAGAAACTAGACAACAATTAAAGAAGTATTGTCGCACATGCGCCGGTTTGAAATTACCTCTCGTGGATATATTCAGTAAAAAGGGCATGCAGATGCGACTGAACCAGCAAATGAAGCATTTGGAAGTAATTAATGAGCAAGATAGCTTATCAACGCAGATGTGCATGGATTGCATATGCGATTTAAAGATgagttacaaatttttcatgcaaattaAAAAGGCTGAGGTTAAACTTAAATCAATTTACATAAGTCTAGCCGATGCAAATGCTAATGAAATAAAGTCTAGAAATTTGAATGCCGATAAAACACCAATATCGGGACCATCCTGTACCATCAAGGAAGATCCTGATAGAAGTACAGAATCATTAAGAGACTTACTCTCCGGTGCTAACGAAGTTGACCTGGACGACAGTATACCAAAAATATCAGCTATATTCTCCCTGCAAGACATACAAGAAACTCCCAAGTCAAGTGACGACatgaattttgaagtaaaCATAAAAACTGAACCGGAAGAGCACGAAGAGTACCCACCATTCAATCAAAGCGACGACAACGACTCTATAGAAGAGTTTGACCCAGAGGATCCGCCTTTTCAAGTTGACAGCTCAGATACCGGCGAATCTGAGGATGAACTGGAGAGTCGTAGATTACagaatttcagaaattctcaAATTGTACAAATGCAACAAACTACAGAATTGGCAGCTTCCATCGGCAAGTCTAATGCTTCTTCGAGCAACCCACCTGGACAGGATgttaaaaaggataaaaaaccGGTGGTCTACAAGTatgatactttttataaatcctACGTCAAGGTGGATACTTTGGAAAAAGACGAAACTCATTCCAATACAACTGACACTTTAAAGAGCAAAAACGAAAGTGAGAATCATGGACATataagagaaggacagacacAACCTAACATCTTGAAGAGGAAGTTACCACTTCTAATAAAAAAGGAACCGCACCCTGATACAGACATCAGTAGCGATGCTCTGGATATTCTGAACTCTAGTGGTGGTCTGAAGGATTCAAAGatgcaaaaattaaatgtacaaAATGCTCTGACCATTGGATCTGCCGAAGAGGAAGGAATAATGTACGTGACGGTGAAGGGATCAAAGCCAAATGAATTGCTTCTGGTAAAAGTGAAGAAgatgaacaaaaatattgataagaaaGACGAAAAGTCTCTCGGTAAGAAAACCGTGGACGTTATGCCCGTGGATaagattttaaagaaatacgAACATTTTACTGGTAAGGAGAAAGAATTGTTTCCtgagagatttaaaaaaactgataTAAGGGAGCAGATCATTGAAGAGCAGATCGAAGAATACAAGAAGAAGCGCGAGAAGGTTTTGGGCGGTAATGCTGTGGGGTTTCCAAACGCCCTAAAACTTGAAGATGGTCAAGTGCGTTTTGTTAAGCAAAATGATAATCAGATTCTTCGGCGGTCTTTGTCCACTGATAGTAACTTGATGATAAAGAAAGATTCTGTCAAGGGAAACGAAGTTAAGAAACCTGATGAAGTGGATCTAAAGGATGTGATTGAGTTAACAAGAACCTTGGAAGACAAGAGTCCAGGTGATAAGACTTACGTTAATACGGAGGAGTATCTGTCGCGTTTAgcaaaattgaaacaaaagtGGGAAgaagcaaagaagaagaaggaatcGCTTCAAAAGGAACTTGATCAGTCATATACCGAAGGAAATATGGAGAAACTTGCAAGGATTCTGGGTGAACGTGAACAAAATCTACAGGACTTTCAAGATTACTTGAAACAGAGGAAAATTGTTATCACGAGGCTTAAGGATGAGGATATCATTTCACTTTACGAGGATAGAAATAATACTACTCTGAAGAAGAGTCTTCCCGATTTAATAGATGAGACTCAGCCGCTGGATTATATACCAGAAGAGAATTTTCTGGAGTGTGATTATTGTCCTGAAGCATTTGCTACGAAAGAAACATTGGAGGAACATTTGAAGAGCCACGACTATAAAATAATGCACTATTGTGAAGATTGCATGGAAGAATTCCCAACAAATAAAGCAAAGAGGAACCATAACATATCTTGCTTGAAAAAGCTTATCTGTAAGTATTGTGACTTCATGCTGGATTCCAAAGGGAAGAAGAGACAGCACGAACAGAAACATTGTGACAGCATGGATGGACAGTTATGTGACGTTTGTGgtgaaaaattcaagcatCAAGGTACTCTGGATCAACATATAAAAACTCAACACATGAGTTGGGAgaagatttttcaatgtcCCAAGTGTCCCAAAAAGTTTGCATTTAAACAGAAATTaagttttcatttaaaatcGGTGCACACTACTTTGCGTGCTTACTTGTGTGAGGACTGCGGAGCAGACTTTAAGAATCCTGCTAGTCTGAGACATCACAGAATACGAAAACATCAGCCTGTGGGTAACAAACGTGAGTGTCCGGTATGTCACAAGTTAGTACCATTTTACAGTCTGTCGAAGCACATGCATACTCACAAAGCTTACACAATACAGTGTCCGCACTGTgataaaatgttcaaaaatagTTCCACCTTAAAGCAGCACGTAAGAATACATGAAGATCAAAGACAATTCAGATGTGACACGTGTGGTGTTGGATTTAACAGAAGGGATGGCTTGAGATTGCACATGCGAGTCCATGAGAAGACAGACAGCAGAGGCCTGAAGGAGTGTTCTTGTCAGGTATGCGGAGAAAAGTTCCCTAACCACTCCATGCTTGTCATCCACAGGAACAGAGTGCACAAGGATGGCAGGCAATATACCTGTCACATATGTAACAGATCTATGATTTCTACGAGATCACTGGAATGGCATATGTCTCATATTCACAACGAGTCACTACCAGGAACACAAAAAGATGATGGTGAAATCGGatctgaaaagaaaagggtgACCTGCTGTCACTGTAACAAGACCTTCAAGACAGAAATGATCCTAAGGACACATATTAAGAATACACACATGGAAAAGGACCCACTGAAATGTACAGACTGTGAAGAGACATTCACATCTGATATAAGATTGAGGCATCATATGATGGTTATTCATAATAGACTCGAAGGCACTTTAGAATGTCCACATTGTCCTAAAAGATTTGTTAATCATCTCAGACTGAAAACTCACATGATATCCCACTCCGAGGAAAGACCTTACACTTGTGAGATATGTGGATTTAATctaaaaactaaaatacaGTTGATCAAGCACCATCAGAATAGGCACAGCGATGAGAGACCCTTGCAATGCAGATACTGTCCTTGGAGGTGTAAACAAGTTAGTGCCCTGGTCTGTCATGAAAGAACTCATACGAATGAACGGCCCTACTCTTGCAGTGTATGTAGACAACGATTCAAATACCTGGGTGACAAGAACAAACATGAGAGACGACACGAAAGTCTTGGTGGTTCAGGTTTCAAGAGAATAGTGGCTGgtagaaatattaaacaaataaaagttcAAGAGGAAGAGACATCTTCTTCGCAAGACCCAGAAGATTTTGATCAGGGTCAGCCATCGTTGCATACAGAAGAGGATTACAGTTCAAAGTTCGATGATGACCAAATAATCAAGTATGAAGCACAGGATATCGAAGAAGAATCCTATGAGCATAGTTACGAACCGGAATACGAAGAGACTTCGAGGGAGGCTTCTGAGGCAGCTGAAGTAATAATGAGTATGGAAGATACAACAGTGTACACAGAAGAAGTGACAGCGGACAATATTGAAACTGCTGAGATGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATcatgtataa
Protein Sequence: MSVSEETTVYLPYGDVEAEDPAKGKLDEACIYAGDEKMQESDTVEPEVKNSTKDGKSQSTQEKSTVSEQSNREKCKPLGKNSPSPISGSDASIQPSLQSDSLSKNTSSKVPSAKQVNVAQTSSTKNLGRRRESQADYSKASSSMSPGRSANVTVPNNVEKITSRRNSKVNNAETETANLELHHSGDQEKLLSTDDNINPIPQEKISAIKTNKLTTTSQEKSVCQIKTINDLKKATPRVKFLTDEPKSLTEFRKLHPSNTTSPPTHSIKKTVQTKALILEETRQQLKKYCRTCAGLKLPLVDIFSKKGMQMRLNQQMKHLEVINEQDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIYISLADANANEIKSRNLNADKTPISGPSCTIKEDPDRSTESLRDLLSGANEVDLDDSIPKISAIFSLQDIQETPKSSDDMNFEVNIKTEPEEHEEYPPFNQSDDNDSIEEFDPEDPPFQVDSSDTGESEDELESRRLQNFRNSQIVQMQQTTELAASIGKSNASSSNPPGQDVKKDKKPVVYKYDTFYKSYVKVDTLEKDETHSNTTDTLKSKNESENHGHIREGQTQPNILKRKLPLLIKKEPHPDTDISSDALDILNSSGGLKDSKMQKLNVQNALTIGSAEEEGIMYVTVKGSKPNELLLVKVKKMNKNIDKKDEKSLGKKTVDVMPVDKILKKYEHFTGKEKELFPERFKKTDIREQIIEEQIEEYKKKREKVLGGNAVGFPNALKLEDGQVRFVKQNDNQILRRSLSTDSNLMIKKDSVKGNEVKKPDEVDLKDVIELTRTLEDKSPGDKTYVNTEEYLSRLAKLKQKWEEAKKKKESLQKELDQSYTEGNMEKLARILGEREQNLQDFQDYLKQRKIVITRLKDEDIISLYEDRNNTTLKKSLPDLIDETQPLDYIPEENFLECDYCPEAFATKETLEEHLKSHDYKIMHYCEDCMEEFPTNKAKRNHNISCLKKLICKYCDFMLDSKGKKRQHEQKHCDSMDGQLCDVCGEKFKHQGTLDQHIKTQHMSWEKIFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCHKLVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQFRCDTCGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESLPGTQKDDGEIGSEKKRVTCCHCNKTFKTEMILRTHIKNTHMEKDPLKCTDCEETFTSDIRLRHHMMVIHNRLEGTLECPHCPKRFVNHLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNIKQIKVQEEETSSSQDPEDFDQGQPSLHTEEDYSSKFDDDQIIKYEAQDIEEESYEHSYEPEYEETSREASEAAEVIMSMEDTTVYTEEVTADNIETAEMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00770568;
90% Identity: iTF_01131030;
80% Identity: -