Basic Information

Insect: Cephus parvus
Gene Symbol: -
Assembly: GCA_030142435.1
Location: JARQTA010000447.1:204601-206989[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.8e-05 0.0048 17.6 1.9 1 23 291 313 291 313 0.97

2 12 0.00086 0.07 14.0 4.6 1 23 317 339 317 339 0.98

3 12 0.0018 0.15 12.9 5.4 1 23 344 366 344 366 0.96

4 12 0.0003 0.025 15.4 3.5 1 23 418 440 418 440 0.98

5 12 0.00095 0.078 13.8 1.4 1 23 445 467 445 467 0.97

6 12 6.1e-05 0.005 17.6 3.6 1 23 516 538 516 538 0.99

7 12 0.0003 0.025 15.4 1.8 2 23 546 567 545 567 0.97

8 12 1.2e-06 9.8e-05 22.9 2.1 1 23 578 600 578 600 0.96

9 12 0.00027 0.022 15.5 1.6 1 23 606 628 606 628 0.97

10 12 0.00019 0.016 16.0 0.7 1 23 634 656 634 656 0.98

11 12 5.7e-06 0.00047 20.8 2.0 1 23 662 684 662 684 0.96

12 12 0.0001 0.0084 16.9 0.3 1 22 690 711 690 711 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.8e-05	0.0048	17.6	1.9	1	23	291	313	291	313	0.97
2	12	0.00086	0.07	14.0	4.6	1	23	317	339	317	339	0.98
3	12	0.0018	0.15	12.9	5.4	1	23	344	366	344	366	0.96
4	12	0.0003	0.025	15.4	3.5	1	23	418	440	418	440	0.98
5	12	0.00095	0.078	13.8	1.4	1	23	445	467	445	467	0.97
6	12	6.1e-05	0.005	17.6	3.6	1	23	516	538	516	538	0.99
7	12	0.0003	0.025	15.4	1.8	2	23	546	567	545	567	0.97
8	12	1.2e-06	9.8e-05	22.9	2.1	1	23	578	600	578	600	0.96
9	12	0.00027	0.022	15.5	1.6	1	23	606	628	606	628	0.97
10	12	0.00019	0.016	16.0	0.7	1	23	634	656	634	656	0.98
11	12	5.7e-06	0.00047	20.8	2.0	1	23	662	684	662	684	0.96
12	12	0.0001	0.0084	16.9	0.3	1	22	690	711	690	711	0.96

Sequence Information

Coding Sequence: ATGACGATGAATGCAAGCTACTTTGGCCTCCCACTTAACATGGACAGAGTATGTCGGGTGTGTCTCTCGGAAGGTACAAATTTGTCACCCATATTCTGTGCTGACCAAGATGTGGACGATTTTTCTGGTCTTTCCCAAAAGATTCAAGTTTGCGGGTCCATCGACATCAATGAACAGGATGGATTACCATCATTGATCTGTGATGTATGCATCTATAAGGCTAGTGTTGCTCATGAATTTCGTCAGCAATGTCAACACTCTGATACACGTCTCAGGTTGTATTACAATAAACCTGCCAGATGCAATATAATGGATTCAAGCACGCAAACGGAGCCGCAAACTCGTATAATGTTAACAAAGAAAAGTAGCAGTCCACaatcaaattatttcacaAAACAAGGAATGCACTCTACAGATTCTCAAGAATATTCCAATTCGACCGAATCTTATACTCATGCACAGCAAGCCATAAGTGAAAATGATATCGATATCCAAGACGAGAAACTCTTCTTATGCAACATCGGTTTTGAGGCGTCAAAGACAAATGAAAAGGAGTCTATGTTAACCGCAGAAAGTGTCTCGGAGACCACATGTTCTCagcaagaaatagaaataccaAATGACCCAATAAGTACTGACGACAAATTGGAGATAAAAGAAGACGAACCAAAAAATCTTGAAGCAATGGAGGAAGAGTATCTTGATGAACGATTATTGAATGAAACTGTAGAAGAGGATAACAAGCCTCAACCAAAACGAACGTCGTCTCGGAAGACAAAATCTATACCAAGCAAAGCGTACAGCGAGGATGAAGTAGAGGATGACTATTACGATCCCAGTAGTGACAGTCAAGACTCAGAGGAACTAAAATTCAAGTGTAAGGTTTGTTCTAAACGTTATGCAACTCAAAAAGGTCTTAAGAAGCATTCCCTCGTCCACGATAAAAAACACAAATGTAATATCTGCTTCAAAATGTTCTACAAGCTAGAAAACATGGAGAAACATAAAAAGGTACACGCCTCCAAGCCACACGCATGTCAACTGTGTCATGCGTGTTTCTCCAAACCCCAGAGCCTGGTGCGACATTTAAAGTCACATACGGAGAAAGTGAATGACATCATCAAGCAAATTCGCACGGAAGATTCACCTGACGATAGACCACCTAAAAAGGAACTAAAGAGCGAAGAGGATACCGATGACGAAACAGGTGTCACAAACGAACctgatgaatttgaaaatgccCCTGAGTTGTACAAATGCGAAATATGTAGTCAGTACTGTTCTTCCCTAAAGAATCTTAAAAGACATACGCTGGTACACGGCGACAAGAAATATTCTTGTACTGTCTGTAAGAAATGGTTCTTCAGGCCAGACACGCTAAAGAAGCATGCAGAGAAACACGGTCATGGGCTCCTGGATAACTTAGTGGACGACAATAAGCTCTTTGACTCGGATGACGATTCATTTCCAAATTCAACAGGAAACATAGAGTCCAGTAGCGAGCATgtgaagaaggaagagagtgaGGAAGAGGGCACTGGAGAATACAAGTGTCAGCATTGTGATAAGGTAATGACTACGAAAAAGGGATTGCGACGTCATGTTTCCACACATAAATTAAAAGCAGAACCTGTGACTTGTGAAATATGTAAGAAAGTCTGTGCCAGTAGAGCACGTTTGACTCTGCACCAGAAGACGCATAATAAACCTAAGGAAAAGGTTCCGAGAGAATATCTTTGTCATATTTGCAGTAAAGTGTATCCTAGCAACTCGTCTTTGACTTATCACATGAGAACACATACGGGGGTTAAGCCACATGTTTGTAAAACGTGTAACAGCGGTTTCACAACTACCACCAGCTTAGCGAATCACATCCGTATTCATACAGGAGATAAACCTTTCGTGTGCCATGTCTGCAGTGCAGCATTCGCTGTGAGTTCAGCGTTTCGTCGACATCTGACGCGACACACGGGGGAAGCCAATTATTTGTGTAAGACCTGCGGCAAGGCCTTTAAGAGACTTAGCACCCTTAAGGAACACACCTATACTCATTCCGGTGAAAAGCCGTATGTTTGTAAAACTTGTGGTGCAGCGTACAGTCACAGTGGTAGCTTGTTCGCGCATCAGAAACGCTGTCGTGCACAATATGGCGAGATGGTAGTTGAGGATCACCATCATGCAGTTGCACATCATATTCATGTGAATAATGTGCAGTCAGCTGTGCGATCACTGGCTGTGATAGGTCAGATGTTCTAA
Protein Sequence: MTMNASYFGLPLNMDRVCRVCLSEGTNLSPIFCADQDVDDFSGLSQKIQVCGSIDINEQDGLPSLICDVCIYKASVAHEFRQQCQHSDTRLRLYYNKPARCNIMDSSTQTEPQTRIMLTKKSSSPQSNYFTKQGMHSTDSQEYSNSTESYTHAQQAISENDIDIQDEKLFLCNIGFEASKTNEKESMLTAESVSETTCSQQEIEIPNDPISTDDKLEIKEDEPKNLEAMEEEYLDERLLNETVEEDNKPQPKRTSSRKTKSIPSKAYSEDEVEDDYYDPSSDSQDSEELKFKCKVCSKRYATQKGLKKHSLVHDKKHKCNICFKMFYKLENMEKHKKVHASKPHACQLCHACFSKPQSLVRHLKSHTEKVNDIIKQIRTEDSPDDRPPKKELKSEEDTDDETGVTNEPDEFENAPELYKCEICSQYCSSLKNLKRHTLVHGDKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLVDDNKLFDSDDDSFPNSTGNIESSSEHVKKEESEEEGTGEYKCQHCDKVMTTKKGLRRHVSTHKLKAEPVTCEICKKVCASRARLTLHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKTCNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRAQYGEMVVEDHHHAVAHHIHVNNVQSAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00296994;
90% Identity: iTF_00254532;
80% Identity: -