Cpar001241.1
Basic Information
- Insect
- Cephus parvus
- Gene Symbol
- -
- Assembly
- GCA_030142435.1
- Location
- JARQTA010000090.1:2771-3109[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-09 1.7e-06 28.0 0.0 2 43 19 60 18 62 0.91 2 2 5.6 6.4e+03 -2.7 0.0 8 15 100 107 97 108 0.83
Sequence Information
- Coding Sequence
- ATGTCGGACAGTACAGTAAAGGTAAAATCAGCGTACCAGAAATTCAAATACAGCCAAGAAGACCTGAATAAAGCTTTATATGAAATACGAAGCAATTCATTAACCCTATGCCGTGCGTCGATGAAGTACAGGATTCCAAAAGGAACTCTTCACAACAAATTAACAGGGAAAGTACCTGTGAATCGAAAGATGGGTTCAGAGACTGTACTAACGGCAGAAAAAGAAGCGAGCCTGGAAAAGTGGATAATTGACAAAGGAAAAGTAGGATTTCCGATGCACCCGGAAGTGGTGAAAGACGCAGTAGAAAATGTTCTAAACGAAAACAATCCGCATTATTAG
- Protein Sequence
- MSDSTVKVKSAYQKFKYSQEDLNKALYEIRSNSLTLCRASMKYRIPKGTLHNKLTGKVPVNRKMGSETVLTAEKEASLEKWIIDKGKVGFPMHPEVVKDAVENVLNENNPHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00292863;
- 90% Identity
- iTF_00292863;
- 80% Identity
- -