Cfum020689.1
Basic Information
- Insect
- Cephus fumipennis
- Gene Symbol
- -
- Assembly
- GCA_030142355.1
- Location
- JARQSY010028478.1:1940-2278[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-09 1.7e-06 28.0 0.0 2 43 19 60 18 62 0.91 2 2 5.3 6.6e+03 -2.7 0.0 8 15 100 107 97 108 0.83
Sequence Information
- Coding Sequence
- ATGTCGGACAGTACAGTAAAGGTAAATTCAGCGTAccagaaattcaaatacagCCAAGAAGACTTGAATAAAGCTTTATATGAAATACGAAGCAATTCATTAACCCTATGCCGTGCGTCGATGAAGTACAGGATTCCAAAGGGAACTCTTCACAACAAATTAACAGGGAAAGTACCTGTGAATCGAAAGATGGGTCCGAAGACTGTACTAACGGCAGAAGAAGAAGCGAGCCTGGAAAAGTGGATAATTGACAAAGCAAAAGTAGGATTTCCGATGCACCCGGAAGTGGTGAAAGACGCAGTAGAAAATGTTCTAAACGAAAACAATCCGCATTATTAG
- Protein Sequence
- MSDSTVKVNSAYQKFKYSQEDLNKALYEIRSNSLTLCRASMKYRIPKGTLHNKLTGKVPVNRKMGPKTVLTAEEEASLEKWIIDKAKVGFPMHPEVVKDAVENVLNENNPHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00294390; iTF_00298232;
- 90% Identity
- iTF_00294390; iTF_00298232;
- 80% Identity
- -