Basic Information

Insect: Cephus nigrinus
Gene Symbol: Hr39
Assembly: GCA_030142395.1
Location: JARQSZ010000718.1:213286-216763[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.37 3.9e+03 -2.9 11.5 45 164 189 316 176 362 0.66

2 5 0.34 3.6e+03 -2.8 1.5 81 129 343 397 319 432 0.42

3 5 3.7e-08 0.00039 20.2 0.0 1 21 515 535 515 539 0.92

4 5 0.56 5.9e+03 -3.5 0.0 89 113 573 597 554 604 0.53

5 5 4.8e-70 5.1e-66 224.0 0.0 202 408 699 900 674 900 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.37	3.9e+03	-2.9	11.5	45	164	189	316	176	362	0.66
2	5	0.34	3.6e+03	-2.8	1.5	81	129	343	397	319	432	0.42
3	5	3.7e-08	0.00039	20.2	0.0	1	21	515	535	515	539	0.92
4	5	0.56	5.9e+03	-3.5	0.0	89	113	573	597	554	604	0.53
5	5	4.8e-70	5.1e-66	224.0	0.0	202	408	699	900	674	900	0.95

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCCCGGGCTGGTGGCCTCCGGCACAGTCCTGGAAGTCATCTTCGTTGGGCGCACGCACCGAGGCTGGGAAGAACGTTTCCGTCACTACGATTAACGTACCGCCCGCCCATGAGATGCATGACGGTAAGAGCGTCTGCAAGTATCTGGGAGGACAGAATGGCGTGACGGTTTCAGTGGTGTCCAGCTGCGGATCAGCTTCCGCTTCTGGGTCCAGTAATGTCGTCGGTACCGGAAACGCTGGCGAGTCCGGTTCCGTGGACGACGTTGAAGACAGTGACGGTGAGGTGAGCAAGATCGACTTCCGGGGTGTTAATCTGCGCACGAAGAAGAAACGGGATGCTTCCGGCGGACAGGAAAGTGAGAACAGTGCAATTGGCACTGACAATATTCAGCAGCAACCCGAAAGGCCAATGTCTTGGGAGGGTGAACTCTCGGACCAAGAAATGTCTTCCAATACTATCACGAACCAGGACCACGAAGAAACGTTTATGGAGGGTGTACAAGTGTGCAGTGCGAGTCCTGGACCACAGGAACAAAAGTTTCCAATAAAACCGGAGCCGGACTTTAGGTCAAGTCCAGGACTCGCTTTGGGCTCCCACAATGAGACGGCCTTGCCCCTTACTCATGCTCAGCAActgcagcaacagcaacaacagcaacagcagcagcaacaacgtGGTCTGGACGGTCTTGAACAGACGCAGCAGAGCGACCTACCCTTGCTGGTTGGCAAACTCCTAGGGGGTTATAATAGTTCAACCCCGAATCACAGTCCTGTACTAAATCCCCGGCATCATCTTACTAAGCACAGTCACACCCGGTCTCAAGTCCCTTCGCCGGATTCGGCGATTCACTCGGCCTATAGTGTCTTTAGCTCTCCCACGCAGAGTCCTCACGCGGCACGGCACTCTGCACTAGGGGCTGGCAGTCCTGTACCATCCTCATCGCTGTCACTTTCACGACACAGTTTCAATAATTCCACGTCTTCGTTAtccttgtctctctcgcactctctaTCGAGGAACAATTCGGACGCCTCCAGTAGCTGCTACAGCTACGGATCCCTTAGTCCGCCGACACACTCGCCCGTCCAGCAACCGAGGCATTCCCAtccgcagcagcagcatcatcAAGTCACTCAGGGCAGTCCTTTGCATCTACCCGCAGCCACCGGTGCCACTCATCATTATTCCACCCCGGGATCGGAACTCTCGGAGGGTCTCGCAGAGGACCAAGAAGACTGTAGGATAGCGCCGGCACCCTCGGGCATCTCCACAAGGCAGCAACTTATAAATAGTCCATGTCCTATATGCGGCGACAAGATCAGCGGCTTCCATTATGGTATATTCTCCTGCGAATCCTGTAAGGGATTCTTCAAGAGGACCGTACAGAATCGTAAGAATTATGTGTGCCTACGTGGCGCGGGATGCCCCGTCACTGTCGCCACTAGGAAGAAGTGTCCAGCATGCCGATTCGACAAGTGCCTGAATATGGGGATGAAGCTGGAAGCGATAAGGGAGGATAGGACTAGAGGCGGTCGCAGTACCTATCAGTGTACCTATACTCTACCTGCTAACCTTATCGGCGGGCCTGCTGGTGGCATTTCCGGTGATAAAATCACCGGTGGTACGTGCAGTCCAGCACCGCCGGGATCGGAGCATCATCACTCAATGAGACATCATTCAAATCATTCGCACAAGCTGCAAATGGTGCCACAGCTCCTACAGGACATCATGGACGTGGAGCATCTCTGGCATTACAACGACAATGATCGTATGACTAGTGGCCAGGGTAGTGGTATCAGTGGCGGTAACGGTAGTGGTAGCGctggcggtggcggtggtggtggtagcgGTAGCGTTAGTGGTGTCAGTGGTAGTGCTAGTGGCGGTGGAAATTCATCCGGAGGCGGAAATTCATCCGCCCTCGGAAGTAACGGGAACATACCTGGAGGAGAATCGTCGAGACCAAGTTCCGCGGGTCCTCCATCCTCCAATCACGAACAACATTCACCACCGGCGAGTACCCCTAACTCGAATTCAACCTCCAATCCTAATGGGAATCCCACGCAGCATCCGGACTTTCTTTCAAATCTGTGTAACATCGCCGATCATAGACTCTACAAGATCGTCAAGTGGTGCAAGAGTCTACCGCTCTTCAAGAACATCTCCATAGACGATCAGATATGCCTTCTTATCAACTCCTGGTGCGAACTCCTCTTATTCTCCTGCTGCTTTCGCAGTATGAGTACGCCTGGCGAGATCAGGGTGTCCCTTGGCAAGTCGATAACTCTCGAACAGGCGAGACAGCTAGGTCTTGCGACGTGTATCGAGAGGATGCTGGCCTTCACAAATAATCTTCGACGACTCAGGGTGGATCAGTACGAGTACGTGGCGATGAAGGTCATAGTTTTGCTAACCTCGGACACCAGTGAACTGAAAGAACCCGAGAAGGTAAGAGCGTCCCAGGAGAAGGCTCTTCAGGCACTGCAGCAGTATACAATCGCAAGGTATCCCGAGATGCCGGCAAAGTTTGGAGAGCTGCTACTCAGGATCCCGGACCTGCAGAGGACCTGTCAGGCCGGGAAGGAGTTGCTCAGCGCAAAGCGTGCCGAGGGCGAAGGCAGCTCTTTCAATCTACTGATGGAACTTCTACGAGGCGATCATTGA
Protein Sequence: MSEQNGPTEGPGPGWWPPAQSWKSSSLGARTEAGKNVSVTTINVPPAHEMHDGKSVCKYLGGQNGVTVSVVSSCGSASASGSSNVVGTGNAGESGSVDDVEDSDGEVSKIDFRGVNLRTKKKRDASGGQESENSAIGTDNIQQQPERPMSWEGELSDQEMSSNTITNQDHEETFMEGVQVCSASPGPQEQKFPIKPEPDFRSSPGLALGSHNETALPLTHAQQLQQQQQQQQQQQQRGLDGLEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHPQQQHHQVTQGSPLHLPAATGATHHYSTPGSELSEGLAEDQEDCRIAPAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGPAGGISGDKITGGTCSPAPPGSEHHHSMRHHSNHSHKLQMVPQLLQDIMDVEHLWHYNDNDRMTSGQGSGISGGNGSGSAGGGGGGGSGSVSGVSGSASGGGNSSGGGNSSALGSNGNIPGGESSRPSSAGPPSSNHEQHSPPASTPNSNSTSNPNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_00770401;
80% Identity: iTF_00293761;