Basic Information

Insect: Cephus cinctus
Gene Symbol: -
Assembly: GCA_000341935.1
Location: NW:2837274-2842642[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5.7 3.4e+02 1.3 0.1 6 20 29 42 27 44 0.72

2 13 0.0017 0.1 12.4 0.4 3 23 98 119 97 119 0.89

3 13 9.9 6e+02 0.6 0.1 5 22 423 440 421 442 0.79

4 13 3.2 1.9e+02 2.1 3.0 1 23 565 587 565 587 0.89

5 13 0.029 1.7 8.5 0.3 3 20 671 691 670 693 0.84

6 13 0.16 9.8 6.2 2.7 1 23 850 872 850 872 0.91

7 13 0.21 12 5.9 0.4 2 20 903 921 902 923 0.93

8 13 0.075 4.5 7.2 1.2 1 23 937 960 937 960 0.94

9 13 0.0028 0.17 11.7 1.8 2 23 968 990 967 990 0.93

10 13 6.2e-05 0.0038 16.9 3.9 1 23 1019 1042 1019 1042 0.96

11 13 0.072 4.3 7.3 1.8 2 23 1047 1067 1046 1067 0.97

12 13 0.065 3.9 7.4 3.8 2 23 1075 1097 1074 1097 0.87

13 13 0.011 0.68 9.8 0.3 2 23 1102 1124 1101 1124 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5.7	3.4e+02	1.3	0.1	6	20	29	42	27	44	0.72
2	13	0.0017	0.1	12.4	0.4	3	23	98	119	97	119	0.89
3	13	9.9	6e+02	0.6	0.1	5	22	423	440	421	442	0.79
4	13	3.2	1.9e+02	2.1	3.0	1	23	565	587	565	587	0.89
5	13	0.029	1.7	8.5	0.3	3	20	671	691	670	693	0.84
6	13	0.16	9.8	6.2	2.7	1	23	850	872	850	872	0.91
7	13	0.21	12	5.9	0.4	2	20	903	921	902	923	0.93
8	13	0.075	4.5	7.2	1.2	1	23	937	960	937	960	0.94
9	13	0.0028	0.17	11.7	1.8	2	23	968	990	967	990	0.93
10	13	6.2e-05	0.0038	16.9	3.9	1	23	1019	1042	1019	1042	0.96
11	13	0.072	4.3	7.3	1.8	2	23	1047	1067	1046	1067	0.97
12	13	0.065	3.9	7.4	3.8	2	23	1075	1097	1074	1097	0.87
13	13	0.011	0.68	9.8	0.3	2	23	1102	1124	1101	1124	0.93

Sequence Information

Coding Sequence: ATGAATCGGGGTTTAACAATGGACAATTCTCTACAATATAACATGAAACACAAAATAAAGGAGCCAATTATTTTGTTGGAACGATGTGATAAGATATTCAGGACGTTGAAGCTGATTAAGCATTTAAATAATACTGAAATAGATAAGAAGGATAATGCAGAATGTAAAGATGAATATTCTTCCGATAAATCTGTATCACCGTACATTAAGTATCAACCTCTGTTATGTAATGGTAATGGTCAACTtccatattttaatttatctataaAACAGTCTAAGTCGCTTATTCTATGTGAAATATGTGGGAAAGGATTCTCAaccaatagaaataaaaatgttcattcTGTGAGAGTTCATGGGATCTCTTTGGCAGTGAAAACTCAGCGCAAGCATAGTAAaaatgtgaataaaaatttggaacaTTCAGAAGATTCACAAAATACAAAGGTTttggataaaacaaaaagtactTCAATGTCAGCTCTATCAAAGAAGTCggagaatattgaaaatcatgaCATTTTCTTACAAAGTGATAAGGCTATGTCGGATATTACTGGAACAACTTCGACAGCTAGTGACACAGAAATACGTTTTAATCGAAAtaagactaaaaaaaaaattgtaatggaAGTACCTAGATTTCAAGCAAGTTGCAAGAACAGAACTGATGACAAAGAGATTGTACTTGCCaatgtgaaagaaaatgaaaagaaccTACGGTTGTTAAATGCACTGACTCTGTTGAAACATAAAGATATTAAGTTTACAGCAAAGAGCACTAAGAGAACTTCGAAGAGTCCTGAAAAGTCTTTTAAAAGTAGTCCCTCGAAAAGTCCTGGAAAAAGTCCAAATGCAGATCAAGGAACATGGCCAGTATCTAATAAGCCTGCAAGAAatctattgaaaaatttcatgatttctAGTCCTGAGCAAACTTTGATGAGAAGGTGGCTTATGAGTAGTCCGCCATCTGGCAAATCAACACTGGAACcattatttaaacaaatcaaaatggaaaaagatGATATAAAAAGTCATCttgaaatacaaaatgaaaCCGAACCTGAAGGAGCTACTCCTGCAACGAATTACAAGATCAGTGAACGAATCCATAATTCTGACACTTCATCGAACCATGAGGTTACAAGTACCGTAACAGATAGCATTAATAATAGTACCCCTAATAATTCCCCTACAACTGAACATAATAAAACAGTTTTACGCCATAACGGCATGACAATGCTACCACCACCGGCAGATGTTATATGCACATTATGTAGCAGGCCGAgcaaaaacattaaaaaacaCATCGTGGCATACCACAAGGTCACAGATCCATCTCTTTTAGTTCAAGAGTCTATTGCACAGTCATATTTTAAAGACCTCATGGGATCTACTGACGAGGACAAAGATCAAACATATAAATCAGACATTGAATCAGAATTGCAAGAGAAGGTACGATCCCAAAGAAAGAGACGTCATACATTCCAAATTCATGAGACCACAAAAGAAGAGAACCCACCAAGTGCCAAGAGATCAAAACCAAATAAACCTCGTCCAGCATCTCCAAAAGTTAATAACACAACTCCGAATGACAACAATGATACCCGATCGAAGAGGAAATCTTCAACAGAGAGTAAttcaaagaagaagaaaacatCTGAGAGAAAACCTGAttcaaatacaatttattgCTGTAATATATGTCAAAGGATAGTTCATGGCAAATATCGTTTGAATACTCACAATGAGGCACATGTAAGACGTGGTGAGACATTGGAAAATATTGGTGACCATCATCAGAAATCAGGCCACAAATCAGAGCAAAAGTCAAAGAAACATAAAAGAGCCAAATCCTTAGAGTCCATGACTCACAGTAGAATTGAGTTGAATGGAGTCGATGAATCTCTGAAACAAGCAAATACAAAGAAGGGAAGAAATACCAAGAACTCGAAGAAGTCAAAGGTCAAACAAACGATACAAATGGAACCTGATCAtagtgaaaaatgttttattaaatgtatatgcggaaaatcattttcaaatatggcAGCATTGGATGAGCATTACATATCTTGTGACTTCAACCATAGGAGGTCTGATGCAAATCGGTCTGTTACATCTCCTATAAGCAGAGCTACAATCCAGGGTTTAAGtctaacaataaaaaagagaaatgattCATATGAAATAGTTCATAGAGATATTGGTGATGAGGAGATGTGCAATGTTTCCAGTCACATTAAGACAAATGAACCACCATCTGGAATATTCCTAACGAGTTCAGACATTGCTGAGATAGAAGATTCGTTGACTATTAAGAAAGAACTAATTGGTATTGAGGAACAAAATGGTCTGAATAGCTTTCCAAATTTTCTGTTGGATATGGAATTCCCAGAAGAAGACAACAATAATATTCCAACAGATGTGCTGGGCGATAAACAACAAACCACTGAAAAAGAGATAGCAGATCCTGAAGCTCTTCAGCTACTCAGCAAGGATACTCCGAGCAGTGAAGATATAACCTCACAAATTGTGAATGATCATAGGTGCATCTTGTgcgaaaaattcttttctagTAAATCTAAAATATTGAAACACTGGTCCGAGCATGGCCCAAAGCTGTTATGTAATTGTGAAGAAAATGTCATAAACATGCAAGAGTATGAAGATCACATTCACAGAAATCATCCAGAGGTTGTGACGTGTGGTTATTgtgcaaaaatatttgacactCTATTTGATTTTGCTGAGCATCGATGTGACGTTACTAAGGGAAAACCTTTAGATGGTTCCAAGGCACCATTCCCTTGCTTAAAGTGCAACAAAAACTTCAATAAAGGCATCGCCTTCGATCGTCATGTTAAGAATTTTCACCCAGACATTGTCAAACCTTTGCAGTGCTATAATTGTTCGCTGCGATTTTCTACCAaagatgagagaaaaaagcACATGACAGAATTACATTGGAAGAGTAAATGTAATATCTGTTACAAAATGTGTACTCATGGATTGAAGAATAAGCATGAATCGTATCATTATGGATTGGGATTCCCTTGTCATGTGTGTAAGAAGGCTTATTCAAACAAAGAATCTTTCACACATCACATAATGCTTACGcatataagtaaaataaaatgtgttATTTGCAAAAAGATTTTAAAGGCGTCTTCCTTCAAGAAACATTTCAGGCGTCACCGGAATTTGGATGGCTTGTTGCAATGTATATTGTGTAAACAGATGTTTTCTACTAATGAGCATTTAATCAATCATCACACGCAGAAgcataattttgagaaatccTGTGAAATCTGTGGAATGAACTTTCTTACAAAGTCTAGCGTACAACAGCACATTGCCAATATGCATCCAAATGTATATGAAACTAGAAACATCATTAAAGAAGAAATCACACTTGAGAGCTAG
Protein Sequence: MNRGLTMDNSLQYNMKHKIKEPIILLERCDKIFRTLKLIKHLNNTEIDKKDNAECKDEYSSDKSVSPYIKYQPLLCNGNGQLPYFNLSIKQSKSLILCEICGKGFSTNRNKNVHSVRVHGISLAVKTQRKHSKNVNKNLEHSEDSQNTKVLDKTKSTSMSALSKKSENIENHDIFLQSDKAMSDITGTTSTASDTEIRFNRNKTKKKIVMEVPRFQASCKNRTDDKEIVLANVKENEKNLRLLNALTLLKHKDIKFTAKSTKRTSKSPEKSFKSSPSKSPGKSPNADQGTWPVSNKPARNLLKNFMISSPEQTLMRRWLMSSPPSGKSTLEPLFKQIKMEKDDIKSHLEIQNETEPEGATPATNYKISERIHNSDTSSNHEVTSTVTDSINNSTPNNSPTTEHNKTVLRHNGMTMLPPPADVICTLCSRPSKNIKKHIVAYHKVTDPSLLVQESIAQSYFKDLMGSTDEDKDQTYKSDIESELQEKVRSQRKRRHTFQIHETTKEENPPSAKRSKPNKPRPASPKVNNTTPNDNNDTRSKRKSSTESNSKKKKTSERKPDSNTIYCCNICQRIVHGKYRLNTHNEAHVRRGETLENIGDHHQKSGHKSEQKSKKHKRAKSLESMTHSRIELNGVDESLKQANTKKGRNTKNSKKSKVKQTIQMEPDHSEKCFIKCICGKSFSNMAALDEHYISCDFNHRRSDANRSVTSPISRATIQGLSLTIKKRNDSYEIVHRDIGDEEMCNVSSHIKTNEPPSGIFLTSSDIAEIEDSLTIKKELIGIEEQNGLNSFPNFLLDMEFPEEDNNNIPTDVLGDKQQTTEKEIADPEALQLLSKDTPSSEDITSQIVNDHRCILCEKFFSSKSKILKHWSEHGPKLLCNCEENVINMQEYEDHIHRNHPEVVTCGYCAKIFDTLFDFAEHRCDVTKGKPLDGSKAPFPCLKCNKNFNKGIAFDRHVKNFHPDIVKPLQCYNCSLRFSTKDERKKHMTELHWKSKCNICYKMCTHGLKNKHESYHYGLGFPCHVCKKAYSNKESFTHHIMLTHISKIKCVICKKILKASSFKKHFRRHRNLDGLLQCILCKQMFSTNEHLINHHTQKHNFEKSCEICGMNFLTKSSVQQHIANMHPNVYETRNIIKEEITLES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00291906; iTF_00298694; iTF_00294089; iTF_00293322; iTF_00295648; iTF_00294863; iTF_01475828; iTF_01473530; iTF_00253180; iTF_00253929; iTF_00255441;
90% Identity: iTF_00294863;
80% Identity: -