Basic Information

Insect: Calameuta idolon
Gene Symbol: -
Assembly: GCA_030142285.1
Location: JARQSV010000387.1:2879892-2883284[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00068 0.049 14.2 0.4 3 23 92 113 91 113 0.94

2 11 1.4 1e+02 3.8 1.4 1 22 555 576 555 577 0.85

3 11 0.18 13 6.5 0.3 5 19 663 677 657 679 0.83

4 11 0.52 37 5.1 2.6 1 23 838 860 838 860 0.91

5 11 0.29 21 5.9 0.4 2 20 891 909 890 911 0.93

6 11 0.11 8 7.2 1.4 1 23 925 948 925 948 0.93

7 11 0.0022 0.16 12.6 0.5 2 23 956 978 955 978 0.93

8 11 3.8e-05 0.0027 18.1 3.6 1 23 1007 1030 1007 1030 0.97

9 11 0.1 7.4 7.3 1.8 2 23 1035 1055 1034 1055 0.97

10 11 0.026 1.9 9.2 3.2 2 23 1063 1085 1062 1085 0.89

11 11 0.016 1.2 9.8 0.3 2 23 1090 1112 1089 1112 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00068	0.049	14.2	0.4	3	23	92	113	91	113	0.94
2	11	1.4	1e+02	3.8	1.4	1	22	555	576	555	577	0.85
3	11	0.18	13	6.5	0.3	5	19	663	677	657	679	0.83
4	11	0.52	37	5.1	2.6	1	23	838	860	838	860	0.91
5	11	0.29	21	5.9	0.4	2	20	891	909	890	911	0.93
6	11	0.11	8	7.2	1.4	1	23	925	948	925	948	0.93
7	11	0.0022	0.16	12.6	0.5	2	23	956	978	955	978	0.93
8	11	3.8e-05	0.0027	18.1	3.6	1	23	1007	1030	1007	1030	0.97
9	11	0.1	7.4	7.3	1.8	2	23	1035	1055	1034	1055	0.97
10	11	0.026	1.9	9.2	3.2	2	23	1063	1085	1062	1085	0.89
11	11	0.016	1.2	9.8	0.3	2	23	1090	1112	1089	1112	0.93

Sequence Information

Coding Sequence: ATGGACAATTTTCTACAATATAACATGAAACACAAAATAAAGGAGCCAATTATTTTGCTGGAACGATGTGATAAGATATTCAGGACGTTGAAGCTGATTAAACATTCAGATAATACTGCAGTAGATAAGAAGGATGATGCAGAAAGTAAAGATGAATATTCTTCCAATAAATCTGTATCACCGTACATTAAGTATCAACCTCTATTATGTAATGGTAACGGTCAACTtccatattttaatttatctataAAACAGTCTAAGTCGCGTGTTCTATGTGAAATATGTGGGAAAGGATTCTCAAAcagtaaaaatagaaatgttCATTCCTTGAGAATTCATGGGATCTCTTTGGCAGTTAGAACTCAACGCAAGCATAgtaaaaatgtgaataaaaattcggAACCTTCGGAAGATTTACAAAGCGCAAAGATTttggataaaacaaaaagtactTCAATGTCAGCTCTATCAAAGAAGTcagagaatattgaaaatcatgaCATTTTCTTACAAAGTGATAAGGCTATGTCAGACACTACTGGAACAACTTCGACAGCTAGTGACAGAGAAATACGTTTTAATCAAAACaagactaaaaaaagaaatgcaatgAAAGTATCTAGATTTCGTGCTAGTTGCAAGAACAGAACTAATGATCAAGCAACTGTACTTCCCAGtgtggaagaaaataaaaagaacctACAGTTGTTAAATGCGCTGACTGTGTTGAAACATAAAGACATTAAGTTTACAGCAAAGAGCACTACAGGAAGTCCGAAGAATCCTGAAAAGTCTTTTAAAAATAGCCCCTCGAAAAGTCCTGGAAAAAGTCCAAATGCAGATCAGGGAACATGGCCAGTATCTAATAGGCCTGCAAGAaatctattgaaaaatttcatgattaCTAGTCCTGAGCAAACTCTGATGAGAAGGTGGCTTATGAGTAGTCCAACATCTGGCAAATCAACACTGGAACCACTATTTAAACagatcaaaattgaaaaagatgatataaaaattcatcttgAAACACAAAATGAAACCGAACCTGGAAGAGCTACTCCTGCAACGAATTACAAAATCAGTGAACAAATCCATAATTCTGAAACTTCGTCGAACCATGAGGTTACAAGTACTGTAACTGATAGcactaataataattcctcAACACCTGAACGTAATAAAACAGTTTTACGCCATAACGGCATGACAATGCTACCACCACCGGCAGATGTTATATGCACATTATGTAGCAAGCCgagcaaaaatattaaaaaacacaTAGTGGCATACCACAAGGTCACAGATCCATCTCTTTTAGTTCAAGAGTCTATTGCACAGTCATATTTTAAAGACCTTGTGGGATCTGCCGACGAGGAAAAAGATCCACCGTATAAATCAGACATTGAATCAGAATTACAAGAGAAGGTACGATCCCAAAGAAAGAGACGTAATACATTCCAAATTCACGATACTATAGAAGAAGAGAATCCACCAAATGCCAAGagatcaaaatcaaataaatctcGTCCAGCATCTCCAAAAGTTAGTAACACAACTCCAAAAGACAACAATGATATCCGATTGAAGAGGAAATCGTCAATAGAGAGtaattcaaagaaaaggaaatcaTCTGAGAAAAAAACtgaatcaaattcaatttatagCTGTAATATATGTCAAAAGATGATTCATGGCAAATTTCGTTTGAATACCCACAATGAGGCTCATGTAAGACGTGGTGAGacattggaaaatattgaagGCCTTCATCAGAAATTAGCCCACAAATCAGAGCAAAAGTCAAAGAAACGCAAACGAGCCAAATCCTTAGAGTCCATGACTCACAATAAAATTGAGTTGAATGGAGTCGATGAATCTCTGAAACAAGTAAATACAAAGAAGGGAAAGAGCTCGAAGCAGTCAAAGGTCAAGCAAACGATACAAATGGAACCTGGTCAAAGTGaagattgttttattaaatgtatatgcggaaaatcattttcaaacatGACAGCGTTGGATGAGCATAACATACATTGTGACTTCAACCATAGGGAGTCTGATGTGAATCAGTCTGGTGCATCTCCTATAAGCAGAGCTTCAATCCAAGGTTTAAgtctaacaataaaaaaaaaaaataattcatatgaAATAGTTCATAGAGATAATGGTGATGAAAAGATGTGCAATGTCTCCAGTCACACTAAGGCAAATGAACCACTATCTGGAATATCCGTAACCAGTTCAGAAATTCCTGAGATAGAAGATTCGTTGACtattaaaaaggaaatgatTGATATTGAAGAAGAACAAAACGGTGTGAATGGCTTTCCAAATTTTCTGCTGGATATGGAACATTCACAAGAGGACAACAATAATATTCCAACAGATGTGCTGGGAGATAAACAAGAAGCTACTGAAAAAAAGGTAGCAGATCCTGATGCTCTTCAGCTGCTCAGCAAGGATAGTTCGAGTAGTGAACATGTAACCTCACAACTTATGAATGACCACAGGTGCATCTTATGTGAAAGATTCTTTTCTAGTAAAtctaaaatattgaaacactGGTCCGAGCATGGCCCAAAGCTATTATGTAATTGTAAAGAGAATATCGGAAGCATGCAAGATTATGAAGATCACATTCACAGAAATCATCCAGAAATTGTGACGTGTGGTTATtgtgcaaaaatatttgacactcTGTTTGATTTTGCTGAGCATCGGTGTGACGTTACTAAGGGAAAACCTTTAGAGAGTTCTAAGGCACCATTCCCTTGCTTAAAGTGTAACAAAAACTTCAACAAAGGCATCTCCTTCGATCGTCatgttcaaaattttcacccaGACATTGTCAAACCTTTGCAGTGCTATAATTGTCCGCAGCGATTTTCTACCAAAGATGAGAGAAGAACACACATAATAGAATTACATTGGAAGAGTAAATGTAATATCTGTTACAAAATGTGTACTCATGGATTGAAGGACAAGCATGAATCGTATCATTATGGATTGGGCTTCCCTTGTCATGTGTGTAAGAAGGCTTATTCAAACAAAGAATCCTTTACACATCACATAATGGTTACGCATATAAGTAAGATAAAATGTGTTATTtgcaaaaagattttaaagGCGTCTTCCTTCAAGAAACATTTCAGGCGGCACCGGAATTTGGATGGTCTGTTGCAATGTATATTGTGCAAAGAGATGTTTTCTACTAATGAGCATTTAATCAATCATCACATGCAGAAACATAATTTTGAGAAGTCCTGTGAAATCTGTGGAATGAACTTTCTTACAAAGTCAAGCGTACAACAGCATATTGCCAATATGCATCCaaatgtatatgaaaatagaaaCATCATTAAAGAAGAAGTCACACTTGAGAGCTAG
Protein Sequence: MDNFLQYNMKHKIKEPIILLERCDKIFRTLKLIKHSDNTAVDKKDDAESKDEYSSNKSVSPYIKYQPLLCNGNGQLPYFNLSIKQSKSRVLCEICGKGFSNSKNRNVHSLRIHGISLAVRTQRKHSKNVNKNSEPSEDLQSAKILDKTKSTSMSALSKKSENIENHDIFLQSDKAMSDTTGTTSTASDREIRFNQNKTKKRNAMKVSRFRASCKNRTNDQATVLPSVEENKKNLQLLNALTVLKHKDIKFTAKSTTGSPKNPEKSFKNSPSKSPGKSPNADQGTWPVSNRPARNLLKNFMITSPEQTLMRRWLMSSPTSGKSTLEPLFKQIKIEKDDIKIHLETQNETEPGRATPATNYKISEQIHNSETSSNHEVTSTVTDSTNNNSSTPERNKTVLRHNGMTMLPPPADVICTLCSKPSKNIKKHIVAYHKVTDPSLLVQESIAQSYFKDLVGSADEEKDPPYKSDIESELQEKVRSQRKRRNTFQIHDTIEEENPPNAKRSKSNKSRPASPKVSNTTPKDNNDIRLKRKSSIESNSKKRKSSEKKTESNSIYSCNICQKMIHGKFRLNTHNEAHVRRGETLENIEGLHQKLAHKSEQKSKKRKRAKSLESMTHNKIELNGVDESLKQVNTKKGKSSKQSKVKQTIQMEPGQSEDCFIKCICGKSFSNMTALDEHNIHCDFNHRESDVNQSGASPISRASIQGLSLTIKKKNNSYEIVHRDNGDEKMCNVSSHTKANEPLSGISVTSSEIPEIEDSLTIKKEMIDIEEEQNGVNGFPNFLLDMEHSQEDNNNIPTDVLGDKQEATEKKVADPDALQLLSKDSSSSEHVTSQLMNDHRCILCERFFSSKSKILKHWSEHGPKLLCNCKENIGSMQDYEDHIHRNHPEIVTCGYCAKIFDTLFDFAEHRCDVTKGKPLESSKAPFPCLKCNKNFNKGISFDRHVQNFHPDIVKPLQCYNCPQRFSTKDERRTHIIELHWKSKCNICYKMCTHGLKDKHESYHYGLGFPCHVCKKAYSNKESFTHHIMVTHISKIKCVICKKILKASSFKKHFRRHRNLDGLLQCILCKEMFSTNEHLINHHMQKHNFEKSCEICGMNFLTKSSVQQHIANMHPNVYENRNIIKEEVTLES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00292580;
90% Identity: -
80% Identity: -