Basic Information

Insect: Cephus cinctus
Gene Symbol: salm
Assembly: GCA_000341935.1
Location: NW:344415-380121[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.7e-06 0.00028 20.5 0.9 1 23 488 510 488 510 0.98

2 9 9.3e-06 0.00056 19.5 2.1 1 23 516 538 516 538 0.98

3 9 0.058 3.5 7.6 3.8 2 23 1002 1023 1001 1023 0.98

4 9 4e-08 2.4e-06 27.0 0.6 1 23 1029 1051 1029 1051 0.97

5 9 5.6e-05 0.0034 17.1 2.6 1 23 1061 1083 1061 1083 0.98

6 9 0.002 0.12 12.2 1.9 2 23 1495 1516 1494 1516 0.97

7 9 0.025 1.5 8.7 0.9 1 14 1522 1535 1522 1537 0.92

8 9 9.5e-07 5.7e-05 22.6 2.1 3 23 1771 1791 1769 1791 0.96

9 9 1.9e-07 1.1e-05 24.9 0.9 1 23 1797 1819 1797 1819 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.7e-06	0.00028	20.5	0.9	1	23	488	510	488	510	0.98
2	9	9.3e-06	0.00056	19.5	2.1	1	23	516	538	516	538	0.98
3	9	0.058	3.5	7.6	3.8	2	23	1002	1023	1001	1023	0.98
4	9	4e-08	2.4e-06	27.0	0.6	1	23	1029	1051	1029	1051	0.97
5	9	5.6e-05	0.0034	17.1	2.6	1	23	1061	1083	1061	1083	0.98
6	9	0.002	0.12	12.2	1.9	2	23	1495	1516	1494	1516	0.97
7	9	0.025	1.5	8.7	0.9	1	14	1522	1535	1522	1537	0.92
8	9	9.5e-07	5.7e-05	22.6	2.1	3	23	1771	1791	1769	1791	0.96
9	9	1.9e-07	1.1e-05	24.9	0.9	1	23	1797	1819	1797	1819	0.98

Sequence Information

Coding Sequence: ATGTCACGGAGGAAGCAGGCACGACCCAGCCGTGCTCATCTCGAGGAGGATCTTAACCAGGGACTTGGGCCCATCGATCCCCTAGGAACGTTAGAAGAAGATACCCGGGAAGGAATCGAGTCCGGGTCAGACGGAGAAGAAAGTGCTGGAGGAGGCATCGTAGGAGGGGTAGAAGGaagtggcggtggtggtggtgttgGTGGCGGTGAAGTAACAGGAGGTCCAGTCGACGAGGCCGTAGACCTTAGGCGATCTCATCATGGAGAGGAGGATGAGAGGGATCGAGAGGATTTGCCAATGgacgaggacgaagaggacgaggagggTGTCGAAGATCCAGGGGAtcaggacgaggaggaggaaggaaCGCGAAAGCAGGTGATGCGACATCGTCAGGATGCGGAGAACAACAACAGCTTTGTCGAAGGTGGACCACCAAGTGGGATCTTCGGTCCACCTGGAGCAAGTCACGTGACCCTTGAGGCCCTTCAGAATACGAAAGTCGCCGTGGCGCAATTCGCAGCCACCGCGCTAGCTGGAGGTGCCGACAGCGAGGCGGCCCTCCAGGACTTGGCGCTGCTTCAGAGTACTCTCTACACCCTCCAGCATCAGCAGGTCTTCCAGTTGCAATTGATAAGTCAACTGCAGCAACAGCTCTCGATAACGCATGGTCAGCCGACGGTTCCGGGAACTCCAACTGGAACAGGGCTACCGGGTACGGGGGTGACTTCGACGACAACGACAAGTACGACAACAAGCACTAGTCATCCAGGTACTCCGTTCGGCAATGTCGGAGGTGCGGGTAGCGCTATCGGTAGTGGTACCAGTGCTGGCATTGGAGGTGGCATTGCTGCACGTGTCGGTAGCGGTATGGGAGGTGCTTCTTGTGTTGATACTCGTGACATATCGTCGTCAACAGACAACAAGGAAGCTTCACCCTCGCCAACGATTCACCCGAAGCCTCTCTCGGCCCTGACTTCGCCGCCGTCCTCCCGGCCACCGAGCCATCATCGACAGTCATCGCCGGGACTACTCCAGTCACAGAGTCAAGAACGAGGCACTCCCTCAGCCAGTGGCGCTGGCAGTGGCGGCAGTACATCGCCATTGAGTCTACCGCTGCCGTTGTCGCTCTCGCTTCCGTCGTCGGCAGCAGCGGCAGCGGCGGNGGCCGCCGCAGCCGCAGCAAGTCAAATGTCCCTCTCCCACCAAATGCCGCCTCTCTGCTCGATAAGCTCCTCACTGGCCTCGTCGATCATCACAAACACGGACCCGCCGCCCCTTCACGAGCCCAACACCCTGGAGATGCTACAGAAACGAGCGCAGGAGGTGCTCGACAATGCGAGTCAGGGCCTCCTGGCGAACAATCTAGCCGATGAGCTCGCGTTCAGGGGCGGCAAGGGCTCACGACTGTCACCCTACGATTCGAAGTCCTCCGGTGGGCGCGGCGAGCCCTTCTTCAAGCACCGCTGTCGCTACTGCGGCAAGGTCTTTGGCAGTGATTCGGCGCTCCAGATTCACATCCGGTCCCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAGTTTCCACACGTTAAGATGAATCCGAATCCCGTGCCCGAGCACCTTGACAAGTACCATCCCCCCCTTCTCCAGCAGCTCGCGGCTTCCGGGCAAAGGCCCTTACCGTCcccgccaccgccaccgccgccgccgccgccgccgccgccccCGGCACCGCCAGcgtcgtcctcctcctcctcgtcgtcgtcgccatcaTCGTCGTCGCATCATCCGTCGTTGTGTCACCCTGGCtccgcagcagcagcagcagccgcgGCCGCCGCCGCAGCGGCTCATGGGTTCCTTCCACCTCAGCCACCGTTACCTCTTGCTCTAACCCTCCCTGTATTGCCACCCCTTTACCGATCACCCCTCCTTAATCACAGGGAGGAACAAGAGGTTCCGGAGAATCTCAGTAAGACCACTGTCCCGTCTCCTCACACATCGCCTCCTGTTCCAACGGGACATCATCATCTCCCTTTACCCAGTTCCCATCATCCTCACCTCCACCATCAATCGAACTCGCATCATTCCTCCTTTCACGAGCATCATCCGatgaagcagcagcagcagctgcaTCATCATCACGCTCAGCAACAACATCATCTCCATCATCACGAGCAGACTACCTCGATAGCATCCTCGGCCGCGCAAAGAGACGAGATTAAACTAGAACACCAGTCACCTACTCAAGACTCCTACCAACAACAATCACGACCAACGAGTCGGGAGGATTCCGAGAGGATAACGCCGAAGCGAGAACCAGAGGATACCGAGGAGCAACCCGAGGACGAAATAGAGGAGTACGAAGATAGTAGCCGGAGATACCTGAACAACTCGTCACCATCCTCGACGGCGAATCCTCCGTCACAACCACAACCTTACGAGGACTGTAGTATGGACAGTAGTAAGATGAGTGCCCGACTTGAGGCCGAAAATGAAATGGACGGGGACGGGGATGAAGAGATGGAAGAACAGCCAGAGAACCTCTCAGGTCGCGGTACTTCGAGTAGACTTGGTCATCAGAGTCTCGGCTATCCTGGTGCCTCTCCCGCAAGCAGTAGTGCCAGCAGCAGTAGCCTCCAAACGACCTTCGCGGGAATTTTATTTCCCACGGGGCCACCACTACCGCCAGTGACTTCGTCCTCCGCCTCGGCGATTCATCATCCTCAGCTGATTCACCACGTCTCCTCCAGTGGTGGCGGCACTACTCCCACCGCACCTGGATGTGAAATGATCGTCGATCCTGCCCGTGATCCTGCCATATACTCGAGCCTACTTCCACGACCGGGGAGCAATGACAACTCCTGGGAGAGTCTTATCGAAATTACCAAAACCTCGGAGACGTCGAAGCTTCAACAGCTGGTTGACAACATCGAGCACAAGTTGACGGATCCTAACCAGTGCGTCATCTGTCACAGGGTACTCTCCTGTAAGAGTGCACTCCAGATGCACTATCGTACTCATACAGGCGAACGGCCATTTAAGTGCAAAATATGTGGCAGAGCCTTCACCACCAAAGGCAACCTTAAGACTCACATGGGGGTGCATCGAGCAAAACCACCCCTCAGGGTGCTTCATCAATGTCCGGTATGTcacaaaaaattcacaaatgcCCTGGTACTTCAGCAGCACATACGACTTCATACGGGCGAACCTACGGATCTCAGTCCGGAACAAATTCAGGCGGCTGAAGTTAATGAATTTCCACCTGGTTACCCACATCATCCTCTGGCCTCGTTTCTCCCCCAGGGATTCCCGGCGCTTCATCCCGCAGGGAGTGGGTTCCCCTTGGGGTTCCCAGGTTCGCGCCAGCACATAGCCGAAAGAACTCCTCATGAGAATGACCTCGACTCGAAGGACTCTCGAGAACATCTGCATCATCCTCTTCTTCCCTCTCATCATCATCTCTCGCACCAACAGAATGCTCAGCATCACTTGCAACTGCATCAACAACACCAAAAGTACTCGGAAGAGCGGAGCTCCACCGCAGGTGATGACGAAATGGCTGAAGATCAAGAAGAGGAGGATGACATCACTCGAGAAGATGATGAGAGGTGCGATGAACGGGAGAGGCGAAGTATGGAAGATGCTGAAAATGATCCGGAGAGAGATGAAAACGAAGAGGAGCATCATCATCAccttcatcatcatcatcatcaacaacagcaacaacggCTGTCGCTACCAAGCTTTTCGACGTCTCTGGCGGCCCTCGAGAACCAGGTGCGAACGATCACGACGACAGTGGCTGGTGGTAGCTCCAGGTCACCTGGACCCCACCGATATAACGGAAGTGAAAAGAGCACCAGTCCCCCGGCGATACGAAATGGAAGCGGCGGTGTTCCGCTTGACCTGACCCCACGCTCTTCCTCGACCCCGGTGGGTGGCTCGACGCCTACCCCGACGCCGCCGTCCCCACCGACAGCAGGAGCATCCTTGGCATCGCCATCCGCCTCGTCACAGAGCACAGCGCATCACGCGCATGCTTTCGGAATGTTCGCAGGCCTTCTTAGGGCGGTCTCATCGCCACCGTCGAATCTCGGTGGTGGCGGCGCCAGCGGCATTGGCGGTAGCAGCATCAGCACTCCCAGCGTATCCGGTACAACGTTAAACAGCGTAGTCTCGATGACCGCTGGGAATCCAGTCCTCGGCGAAGGCGTCGGTAGCGTCGTTGGTGTCAGTGGCGTCGGCGGTGTCGGTGGCAGTAGCGGCGGCGGGGGCGGTAGCGGTGGTGGCGGTGAAGGTGCCGGTAGCAGCACTACCGCCACCACCGGAGGAGCACTTGCCTCTCTAACGACGTCAGCCGTTCTCGCTGCCACTTCTACCTACAATCCCCTCGGCCTGGCTGTCGGAGGGCCAGCAGTCCGCGGTAACACGACATGCAATATCTGTTACAAGACGTTCGCTTGTAACTCGGCCTTGGAGATTCACTACCGGAGCCACACGAAGGAACGACCGTTCAAGTGCACCATTTGCGACCGGGGCTTTTCCACGAAGAATGAACGCGAACCCTGGTTGACGAATACGTGTACCTGTGTCGATCGGAGGAACTCCCTATCCAAGACCGGCACCGAGTCCACTAGCACCACTAGCACGACTAGCACCACTATCACCAACATCCCTTCGTCCGAGTCGCATGGCGGCAATCGGACGAGGCCGAAACGCAGGCGGCGACGTCCTGAGGAGAGGAAGCCCCGGGGGCGGACTGGTGGCAACGAATGGGGGCGGGGAGTGATCTCTGGCTACGCTGCTCTCCACCTGCCCCCGATGCTGCCTCCCGCCCTCGGACTTCTCGCCTCGGACCACGTCTTCCTGGGGAACATGAAGCAGCACATGCTCACACACAAGATCCGGGACATGCCGCCTCACCTCTTTGCCGACGCGAAACAGACGggtcagcagcagcagcagcaaccaCAGCAGCAGGATCATGAGAACTCGAGGAGTCCCATGTGTGCGGATGAGTCGAGTCTACCACCTCCAGcgcctccaccaccaccaatgCCACCGTCGTCCGTGGAAGCTGTAGTGGCAGCCGCGGCGATGCCTGTCAAGAGATCACCGCCCGAGGGTGATTTACCTGCGCCCAAGAGGCCGCCCAGTAAGTCGCCGTCATCGTCCTCACCGTCGCCGGcgccgtcgtcgtcttcgccctcgtcgtcgtcgtcggcgtCAAAGACCCGCGGCATGCCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCTTCGGCGCTCCAGATCCATATGAGAACACATACGGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAACCTCAAGGTGCACATGGGAACGCATATGTGGACGAacggagcgtcgcgacgaggTCGCCGAATGTCATTGGATCTACCGCCACTGCCCATCACACCCAAGGACTCGGAGTTTCTTCAGCGACGACCGGATCTCTTTTATCCTTATCTACCCGCGCCGTTCCTTAATGGCGTTCAGCAAAAACTGAACGAGATCTCGGTCATACAAAGTAACAATGGACTAACGTCGCCACACAGCGCAAGTGCAGCCAAGTACGCTGGTCTCTTTGGATCAGTCTATGGAGGCGTCGctggtggcggtggcggtgcTGGCGGTGGCGCCGGAGGTGGCGGTATCGCCGCGGGATTCCCTGTTGACAAGCAGCCGATGGCACCGAGTAACGGCTCCCTAGGAGAATCGAAATCCCTATCAGCAGGGTCCATGCTCTTCCGCACACCGTCTCCATCTCATTCACCTGGCACTCCGTCGTCGAACACCGGCAATCAGAATTCCGCCAGTGTACCATCCTGGGGAGGTAGCGATCCGCTGCAACACAGATTCGAGCGTGAAACTTCGTCCAGGACGGAGGAGAACGCGACTCCGCCAACGGCAAGACTACCACCTACACCGGCGCCAAGAGGGGAAGGTCTGGCAGCCTAG
Protein Sequence: MSRRKQARPSRAHLEEDLNQGLGPIDPLGTLEEDTREGIESGSDGEESAGGGIVGGVEGSGGGGGVGGGEVTGGPVDEAVDLRRSHHGEEDERDREDLPMDEDEEDEEGVEDPGDQDEEEEGTRKQVMRHRQDAENNNSFVEGGPPSGIFGPPGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQPTVPGTPTGTGLPGTGVTSTTTTSTTTSTSHPGTPFGNVGGAGSAIGSGTSAGIGGGIAARVGSGMGGASCVDTRDISSSTDNKEASPSPTIHPKPLSALTSPPSSRPPSHHRQSSPGLLQSQSQERGTPSASGAGSGGSTSPLSLPLPLSLSLPSSAAAAAAXAAAAAASQMSLSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSSGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPPPPPPPPPPPAPPASSSSSSSSSPSSSSHHPSLCHPGSAAAAAAAAAAAAAHGFLPPQPPLPLALTLPVLPPLYRSPLLNHREEQEVPENLSKTTVPSPHTSPPVPTGHHHLPLPSSHHPHLHHQSNSHHSSFHEHHPMKQQQQLHHHHAQQQHHLHHHEQTTSIASSAAQRDEIKLEHQSPTQDSYQQQSRPTSREDSERITPKREPEDTEEQPEDEIEEYEDSSRRYLNNSSPSSTANPPSQPQPYEDCSMDSSKMSARLEAENEMDGDGDEEMEEQPENLSGRGTSSRLGHQSLGYPGASPASSSASSSSLQTTFAGILFPTGPPLPPVTSSSASAIHHPQLIHHVSSSGGGTTPTAPGCEMIVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPHHPLASFLPQGFPALHPAGSGFPLGFPGSRQHIAERTPHENDLDSKDSREHLHHPLLPSHHHLSHQQNAQHHLQLHQQHQKYSEERSSTAGDDEMAEDQEEEDDITREDDERCDERERRSMEDAENDPERDENEEEHHHHLHHHHHQQQQQRLSLPSFSTSLAALENQVRTITTTVAGGSSRSPGPHRYNGSEKSTSPPAIRNGSGGVPLDLTPRSSSTPVGGSTPTPTPPSPPTAGASLASPSASSQSTAHHAHAFGMFAGLLRAVSSPPSNLGGGGASGIGGSSISTPSVSGTTLNSVVSMTAGNPVLGEGVGSVVGVSGVGGVGGSSGGGGGSGGGGEGAGSSTTATTGGALASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNEREPWLTNTCTCVDRRNSLSKTGTESTSTTSTTSTTITNIPSSESHGGNRTRPKRRRRRPEERKPRGRTGGNEWGRGVISGYAALHLPPMLPPALGLLASDHVFLGNMKQHMLTHKIRDMPPHLFADAKQTGQQQQQQPQQQDHENSRSPMCADESSLPPPAPPPPPMPPSSVEAVVAAAAMPVKRSPPEGDLPAPKRPPSKSPSSSSPSPAPSSSSPSSSSSASKTRGMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLTSPHSASAAKYAGLFGSVYGGVAGGGGGAGGGAGGGGIAAGFPVDKQPMAPSNGSLGESKSLSAGSMLFRTPSPSHSPGTPSSNTGNQNSASVPSWGGSDPLQHRFERETSSRTEENATPPTARLPPTPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00298578;
90% Identity: iTF_00253834;
80% Identity: -