Ccin007545.1
Basic Information
- Insect
- Cephus cinctus
- Gene Symbol
- JARID2
- Assembly
- GCA_000341935.1
- Location
- NW:6135-14821[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7 1e+04 -3.7 0.2 62 82 162 180 147 181 0.57 2 2 6.5e-23 1e-19 70.0 0.0 6 89 1350 1431 1346 1431 0.94
Sequence Information
- Coding Sequence
- atggtcTTAAGTCGAAATgacaagagaaaaaggaaagaaggagACCTTGTGGATCTCATGGATCCACTATCAGGATCACCCAATAGaACAAAGGTTCATGCGCAAAGAAAGTTTGCACAAGGAGCAGCAACAGTCTTTAATCCTGCACATACTCCcatcaaagaaaaagagaaggtgAAGCCTGCTACGATTACAGAATTGATCACACATAAACGCCCAAACACTGAAGACTTCCTTACATTTCTTTGCTTTCGAGGCACACGAATATTACCGCCAAGTCTCAATTTCTTCAACGTTGGACCTAAGAAAGGTTCTTCAGATCCAGACCCAGAACAGGCATCAACAGATAATAGTCCATCATCATCAACGATGTCAACACCATCAATAGAAGTGCCAAAGGTGACAACGTGTCAGAAATCTCCAGGTAAAATAAAGAGCAGCataactgaaaagaaaaaggtacctaacagaatacaaaaaaatattaacaaatacAAGACAACATCATCCACAGTTCAAGcattgaagaaaaagtatcaGGAACAACGTCTTGCCAAACAAAGGATTAAGAATAAATTCAAAGCCTCGTGCGTCATGAGAACGCGCTCGGCGACTGAGCAGGCAATTTTAAAATCTACCAGCAAACTAACACCAAGTAAATTCCTTCCTAAGGTTGAGACAAAAAGACACGGTTTACGAAGTAGCGCACTTGCAGATAAAACAAAACGCGCAAATCTAACAAAAGTTAAACCAGTACCGtcgaaaccaaaaaaaagaagtattaCAAAGGATAAGAGTAGTGGTTCTTCAGATACCGAATCGTCGTCGGAAGAAGATGTGCCTCTCGTAAAACCAACGCTGCCAAAGCGCCCGTTAAAATCCACAGTTCCCAAAAAGATCTGCACCAGGAGCAAATCGGAAATGCGAAGAATAACGAGATCGCACAGTGAAACTATTTCTGCACAAATTATATCCAGGCGACCAtctagaaaaacaaaagaagcTGCTGCCGTTTACATGGAGATCCTTGGAAGAAAGTTAATTAGTCCTGACTTAGAGAATGATGATAATCTATCAGTGGACAGTTTTCCCGAATTACCAAACGCTCGTAGAATCGCCCAAACGGAAAATGAGATCAGAGCGAAAGTAAAGCAAACGACAAAGCTGAGTACtaataaagaaagtaaaaacgaAACTTGTACTAACAATCCCAAACGTGCTGATAAAAGTAAACCAGAAAAAGTTGTAACGAAGAGCAAAAGGCTGATGAGAGTACAAAAGTATTGCGAATTAGATAGCGAGGAAGAATCAGAAAGTTCCGTTGAATCTAATCAAACACGACCTATCACCAGACGAAGTGTTAGTAAATTAGGAAAACCAATTTCCAGGAGCCTAAGGTCTTCCTCACGGAATGCTACGACGAAACCTGAGCCtcaaaataatacaaagagCAATACAAGCAAAGACAAAGCCCTGGTAAAGCGTAAGCGAGAACAAAATACTGCCAAAGTGCCACctccaaaaaataattcaactaAGCAAAAGATGCAAAAGAGTAAAGCTGATAGTATAGAATCAGATGAAGAAACATTAGGAATGCTATTAGATAaactgaaaagaaagaaagaatctaAGGAAATGGATACACAAACTCCTCGTACAGATCGGAAGAAGacagaagagaaaaatgaaaatgtaccTCCGTCGGAAGTACTGAACAACAAGCTTGACCCTTCTAAGATATCGGACGATGAGGAGTCTTTCAgaggattttcgaaaaaggCAATTTCAAAAGTTCTTAATTCCTGCCATACTCACGTCAGTGCCAATCTCCTTGCATCTGAAGAAGCTGATGGGAAAATGGATGTGCTTAAAACACAAGACACGCCCCAAACCAGCAATTCGGAttcaaaggaaaagaaatatacgaTTATAGAAAATGATAGTTTAACACCTGTAATAACAATACCAAGTTATCCCTTTGTTAAACCTGTACAAGAACTAACTATTAATTTGGATCACGAAACAGTGACCAATTTACAAATACCAATTGTGACAAAGTTAGATAGAAAGTGTAATCATGATTCAAATGATACTACGATTAACATCATTGATATGCCATTACCAACATCTTTGGCACGTAAAGAGCGTGTTAACATGTCAACagaacaaattgaaaaatggctCAATGAAAGTTCAATGGCtaaagaagaaagtaaagtTGAAATGGAAACAGTGtcgaattttaaatatgacaTTGGTGAAAAAGTCAAGGCAGACATTACGCATTTATCAATTCCCACTAGAATTCAGCATTTAGTACGTCCTGTTAATGTGACACTTTCAAAGCTAGCTGAGAAAGCAAACTCAAAGGATCGTATAGCATTACAAAGTAGAATTATACCAACGCTTATAACAGCTACTCAATCTATTCCTTTCAAACTACAAAACATACCAACTAAcaggaataaaattaatgctgACATTAAGGAGATTATTAAAGGACGTAATATGAAAACGAGTAAAGATTCTTCTTTAGGAGATGACAGTGACGCTGTGTCGAAGTCTGATCAGAATTCAGTGGACGGTTCACCCGAGAAAAAATCATCTCCAGAgaagaaatcaatttttcaattacgcAAACCCTTTCTACCGAAGGTCAAGGAGCGCAAGGGTATAACCCCAAATGCTAATGCATTTTCCCCAGAGAACGAAAGTAGTGTTTATGCTTTTGAGAGTGATACAGAAACTCCCATAAGTACGCCATTCCGGCGAAAACTGAAGGAAGGTAATAAGGCAAACTCTGTTTGCTCAACTACGGAGGATGAGTTGATGAAAGCTGTGGAGGAAGTAGTGAAACCCCACgaggaattattaaaaaatgaggaCGAAGCGTCAAGAGCTAATGATATAATAGTTAAAACTGAGAAGGAGTCACCAGTTATTAAAAATCCTGTTGCTTCAACTACAATAAGTGTTAATAAGTTTCAACTGCCAAAGAACTTTGCTAGCTTAGCTAATGTTCAAGTTTTGCCATTAGATAAACTTACAACAAGTTGGAGCAATGTTAACTGTAGTGCTTCTATAGCAGTCCAGGTTAACCTTGATGAACAGTCCCAGGATCCACAACTGGTAGTGAGTGAGGAGAATGGTCAACAAAAGAGCACTGAGATATCCACTCAGACAGAATgtaataatgacaatgatgatgataatgatggaCAATTATTCTACATTCCATTACAAGCAGTAACAAGGAATGGACCAAATTTAGTCCAAGGTCAACAATTGATACAAGGAGTTGCTGTTAAATTGGGAACCGAAGGCCCAACTGGACCTAATCAAAGAGTACTATTACGTGCTAAATTGGTTACCAAACCACCTGTATCTGTTGTACGGTGTCCTCCAGTTGGTACGGTACAACCTACAACTCGTGTACCACCAACTTCTTCAGCACAGACAACTGTGGAACAACCGATTGCTTCAACGTCTGTTATATCCACACCGTCAACTTCTGCTTTTCAACAACCTCCATCTATAGTGCAAATTTCAACTAGACAGACTACTTCTAATCTACAAAGTTCTAGTAGACAGGCAACTACTGTAACAGCAAcggcaacaacaacaacgacaACTACAGTAACATCTTTTGAGTCGAAAGTTACGAAATCCCCAAAAATAACCAGAGAAAGAAAAGCTTCTGTTGATTCggtgaaaaatggaaaaagGTCACAGTCGAAAACCAAGCATAAAATCTCAGAATTCTGCTCACCTACTAACGACACTACATTTCCAATTGCGCTAGAGTCAAGTAAAGAAGCTCGACTTGTGGAAGCTCCAACTTTTCATCCAactgaaaaagattttcaagatCCGCTGGAATACATTGATAAGATAAGACCGATCGCTGAAAAATTCGGTATTTGCCGTGTGGTACCTCCGCCTAATTTCAAACCGGAATGCAAGGTATCCGATGACATGCGATTTACAGCGTACAATCAATACGTGCATCGTATGCTTCACAGATGGGGACCTAATGTAAAAGAAATGATGGCTATAAAGAAATATCTGGCTACACAAAGCATAACTTTAACTCATCCACCATGGaTCGGTGGCATGGAAGTAGATCTACCACATTTATATCAGACAGTACAAAGTTTAGGTGGACTAAAGGAAGTcattgagaagaaaaaatggcaGAAAGTGGCTGACGGTATGAAAATACCAAAATCTGCACAAGATCGCGTAACTAAATTGGATGATATCTATTGTAAATACTTATTGCCCTATGACACATTATCACCGgaggaaagagaaaaattatttgatgaaGTGGAAACAGAATGGACGAAACACGAAAGCAAAGCATTAATGAGACAAGATGCTCAGTCCAATGATAACGatgaggaggaagaggaggacaGCTCTGACGAAATCGAAGAATGCATCGTGAAAGGTAGAAACATGCCGCTCAACGCTTTTTACCGAATTGCACGCAACACGCAACGTATGTGGTTCGGTGAGAATCAGCGCTCCGGAAGTGAAGCAGAGGGTGCTTCGGCAGATGAAGTGGAAAACGCATTTTGGAAACACGTTGCCGAAAGGAAGCGTCACGTCTGCGTCCACGCGGCCAGCATAGACTCCAGTGGTCGTGGCTTTGGATTCTCTGTTGCTAAGAACAGCCCCTTTGCCAGGCACCCTTGGAATCTTAAAGTGCTTACTAACAATGCTGGGTCGGTGCTCAGAGCTTTGGGACCACTAATGGGTGTAACTGTACCAACGCTCCACGTTGGGATGCTGTTCAGTGCCTGCTGTTGGTATCGAGATCCACATGGCTTACCTTGGATAGAATATTTGCATACAGGCgctaaaaaaatttggtatgGGATACCTGACGAGCACAATAATAACTTTAGGGAAGCACTCTCGAAGATGGTACCTAGGTACTGCAAGAATAAAACTATTTGGTTGCCATCTGATACTGCCATGGTACCACCAGAAACGTTAGTCAAGAATGGCGTACCTCTGTGTCAGACAGTACAGGAACCTGgtcaatttataattgtatttccTAAAGCATTTACTTCGAGCATTTGTACTGGTTATGTGGTCTCAGAGAGTGTGTATTTCGCGCAGTCTTCCTGGCTGGAAACTGCCGAACAAGTGTTCAAGgACATACAAGATAGTTGTGAACCAACAATATTCTCCTTCGAAAGACTACTGTTCAGTATTATCAATGATTCTAGATCTCATATCGATGTACTTAAACAgattttacCAAGCGTCATAAAAATTCGTGATCGAGAAATAGACTATCGTAAGCAATTAGAGTACTTGGGTCTGACCAATACTGAGAAACTACCACTGCCTGATAgtggaaaacgaaaaaagggaaaaaaggtgAATGACGACGATGGTGACTTTGAATGTGAAACTTGTCGGACCAACTTGTTTGTTTCTTTGGTGAACAATTCGCAAGATGACAGTGTATACTGTCTCCCGCATGCACTTCACTTGCTTATCAGAAAGAAACAAGTTCTCAAGCATTGCACACTTATGTACACCTACAGTGAGCACGAACTGGACGACCTGATTCACAAACTTGAAGACAGGATCGAAGCCAAATCTAAGAAGACTAATCAAATCAGACaagctaaataa
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMDPLSGSPNRTKVHAQRKFAQGAATVFNPAHTPIKEKEKVKPATITELITHKRPNTEDFLTFLCFRGTRILPPSLNFFNVGPKKGSSDPDPEQASTDNSPSSSTMSTPSIEVPKVTTCQKSPGKIKSSITEKKKVPNRIQKNINKYKTTSSTVQALKKKYQEQRLAKQRIKNKFKASCVMRTRSATEQAILKSTSKLTPSKFLPKVETKRHGLRSSALADKTKRANLTKVKPVPSKPKKRSITKDKSSGSSDTESSSEEDVPLVKPTLPKRPLKSTVPKKICTRSKSEMRRITRSHSETISAQIISRRPSRKTKEAAAVYMEILGRKLISPDLENDDNLSVDSFPELPNARRIAQTENEIRAKVKQTTKLSTNKESKNETCTNNPKRADKSKPEKVVTKSKRLMRVQKYCELDSEEESESSVESNQTRPITRRSVSKLGKPISRSLRSSSRNATTKPEPQNNTKSNTSKDKALVKRKREQNTAKVPPPKNNSTKQKMQKSKADSIESDEETLGMLLDKLKRKKESKEMDTQTPRTDRKKTEEKNENVPPSEVLNNKLDPSKISDDEESFRGFSKKAISKVLNSCHTHVSANLLASEEADGKMDVLKTQDTPQTSNSDSKEKKYTIIENDSLTPVITIPSYPFVKPVQELTINLDHETVTNLQIPIVTKLDRKCNHDSNDTTINIIDMPLPTSLARKERVNMSTEQIEKWLNESSMAKEESKVEMETVSNFKYDIGEKVKADITHLSIPTRIQHLVRPVNVTLSKLAEKANSKDRIALQSRIIPTLITATQSIPFKLQNIPTNRNKINADIKEIIKGRNMKTSKDSSLGDDSDAVSKSDQNSVDGSPEKKSSPEKKSIFQLRKPFLPKVKERKGITPNANAFSPENESSVYAFESDTETPISTPFRRKLKEGNKANSVCSTTEDELMKAVEEVVKPHEELLKNEDEASRANDIIVKTEKESPVIKNPVASTTISVNKFQLPKNFASLANVQVLPLDKLTTSWSNVNCSASIAVQVNLDEQSQDPQLVVSEENGQQKSTEISTQTECNNDNDDDNDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPVSVVRCPPVGTVQPTTRVPPTSSAQTTVEQPIASTSVISTPSTSAFQQPPSIVQISTRQTTSNLQSSSRQATTVTATATTTTTTTVTSFESKVTKSPKITRERKASVDSVKNGKRSQSKTKHKISEFCSPTNDTTFPIALESSKEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVETEWTKHESKALMRQDAQSNDNDEEEEEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGSEAEGASADEVENAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPETLVKNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQSSWLETAEQVFKDIQDSCEPTIFSFERLLFSIINDSRSHIDVLKQILPSVIKIRDREIDYRKQLEYLGLTNTEKLPLPDSGKRKKGKKVNDDDGDFECETCRTNLFVSLVNNSQDDSVYCLPHALHLLIRKKQVLKHCTLMYTYSEHELDDLIHKLEDRIEAKSKKTNQIRQAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01130593;
- 90% Identity
- iTF_01130593;
- 80% Identity
- -