Basic Information

Insect: Cephus brachycercus
Gene Symbol: salm
Assembly: GCA_030142315.1
Location: JARQSX010000740.1:353130-362933[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.9e-06 0.00051 20.5 0.9 1 23 497 519 497 519 0.98

2 9 1.4e-05 0.001 19.6 2.1 1 23 525 547 525 547 0.98

3 9 0.086 6.3 7.6 3.8 2 23 1009 1030 1008 1030 0.98

4 9 5.9e-08 4.4e-06 27.0 0.6 1 23 1036 1058 1036 1058 0.97

5 9 8.3e-05 0.0061 17.1 2.6 1 23 1068 1090 1068 1090 0.98

6 9 0.0029 0.21 12.2 1.9 2 23 1505 1526 1504 1526 0.97

7 9 0.037 2.7 8.8 0.9 1 14 1532 1545 1532 1547 0.92

8 9 1.4e-06 0.0001 22.7 2.1 3 23 1752 1772 1750 1772 0.96

9 9 2.7e-07 2e-05 24.9 0.9 1 23 1778 1800 1778 1800 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.9e-06	0.00051	20.5	0.9	1	23	497	519	497	519	0.98
2	9	1.4e-05	0.001	19.6	2.1	1	23	525	547	525	547	0.98
3	9	0.086	6.3	7.6	3.8	2	23	1009	1030	1008	1030	0.98
4	9	5.9e-08	4.4e-06	27.0	0.6	1	23	1036	1058	1036	1058	0.97
5	9	8.3e-05	0.0061	17.1	2.6	1	23	1068	1090	1068	1090	0.98
6	9	0.0029	0.21	12.2	1.9	2	23	1505	1526	1504	1526	0.97
7	9	0.037	2.7	8.8	0.9	1	14	1532	1545	1532	1547	0.92
8	9	1.4e-06	0.0001	22.7	2.1	3	23	1752	1772	1750	1772	0.96
9	9	2.7e-07	2e-05	24.9	0.9	1	23	1778	1800	1778	1800	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGATGGAGCATCACACGGCGACTCGAGAGCCGCAGTAACAAGCAGCGTCGCGACATCAAGATCTGTCAGGCCGAACGTACTACTTCGCCTGGGTCCCGTGATATCGCCTACTCTCAGTATTCCGGGGAAGGAATCGAGTCCGGGTCAGACGGAGAAGAAAGTGCTGGAGGAGGCATCGTAGGAGGGGTAGAAGGaagtggcggtggtggtggtgttgGTGGCGGTGAAGTAACAGGAGGTCCAGTCGACGAGGCCGTAGACCTTAGGCGATCTCATCATGGAGAGGAGGATGAGAGGGATCGAGAGGATTTGCCAATggacgaggacgaagaggacgaggagggTGTCGAAGATGCAGGGGAtcaggacgaggaggaggaaggaacgCGAAAGCAGGTGATGCGACATCGTCAGGATGCGGAGAACAACAACAGCTTTGTCGAAGGTGGACCACCAAGTGGGATCTTCGGTCCACCTGGAGCAAGTCACGTGACCCTTGAGGCCCTTCAGAATACGAAAGTCGCCGTGGCGCAATTCGCAGCCACCGCGCTAGCTGGAGGTGCCGACAGCGAGGCGGCCCTCCAGGACTTGGCGCTGCTTCAGAGTACTCTCTACACCCTCCAGCATCAGCAGGTCTTCCAGTTGCAATTGATAAGTCAACTGCAGCAACAGCTCTCGATAACGCATGGTCAGCCGACGGTTCCGGGAACTCCAACTGGAACAGGGCTACCGGGCACGGGAGTGACTTCGACGACAACGACAAGTACGACAACAAGCACTAGTCATCCAGGTACTCCGTTCGGCAATGTCGGAGGTGCGGGTAGCGCTATCGGTAGTGGTACCAGTGCTGGCATTGGAGGTGGTATTGCACGTGTCGGTAGCGGTATGGGAGGTGCTGCTTGCGTTGATACTCGTGACATATCGTCGTCAACAGACAACAAGGAAGCTTCACCCTCGCCAACGATTCACCCGAAGCCTCTCTCGGCCCTGACTTCGCCGCCGTCCTCCCGGCCACCGAGCCATCATCGACAGTCATCGCCGGGACTACTCCAGTCACAGAGTCAAGAACGAGGCACTCCCTCAGCCAGTGGCGCTGGTAGTGGCGGCAGTACATCGCCATTGAGTCTACCGCTGCCGTTGTCGCTCTCGCTTCCGTCGTCGGCAGCAGCGGCAGCGGCGGCGGCCGCCGCAGCCGCAGCAAGTCAAATGTCCCTCTCCCACCAAATGCCGCCTCTCTGCTCGATAAGCTCCTCACTGGCCTCGTCGATCATCACAAACACGGACCCGCCGCCCCTTCACGAGCCCAACACCCTGGAGATGCTACAGAAACGAGCGCAGGAGGTGCTCGACAATGCGAGTCAGGGCCTCCTGGCGAACAATCTAGCCGATGAGCTCGCGTTCAGGGGCGGCAAGGGCTCACGACTGTCACCCTACGATTCGAAGTCCTCCGGTGGGCGCGGCGAGCCCTTCTTCAAGCACCGCTGTCGCTACTGCGGCAAGGTCTTTGGCAGTGATTCGGCGCTCCAGATTCACATCCGGTCCCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAGTTTCCACACGTTAAGATGAATCCGAATCCCGTGCCCGAGCACCTTGACAAGTACCATCCCCCCCTTCTCCAGCAGCTCGCGGCTTCCGGGCAAAGGCCCTTACCGTCcccgccaccgccaccgccgccgccgccgccccCGCCACCGCCAGcgtcgtcctcctcctcctcgtcgtcgtcgccatCATCGTCGTCGCATCATCCGTCGTTGTGTCACCCTGGCtccgcagcagcagcagcagcagcggccGCCGCCGCCGCAGCGGCTCATGGTTTCCTTCCACCTCAGCCACCGTTACCTCTTGCTCTAACCCTCCCTGTATTGCCACCCCTTTACCGATCACCCCTCCTTAATCACAGGGAGGAACAAGAGGTCCCGGAGAATCTCAGTAAGACCACTGTCCCGTCTCCTCACACATCGCCTCCTGTTCCAACGGGACATCATCATCTCCCTTTACCCAGTTCCCATCATCCTCACCTCCACCATCAATCGAACTCGCATCATTCCTCCTTTCACGAGCATCATCCGATGAAACAGCAGCAGCACCTGCATCATCATCACGCTCAACAACAACATCATCTCCATCATCACGAGCAGACTACCTCGATAGCATCCTCGGCCGCGCAGAGAGACGAGATTAAACTAGAGCACCAGTCACCTACTCAAGACTCCTACCAACAACAATCACGACCAACGAGTCGGGAGGATTCCGAGAGGATAACGCCGAAGCGAGAACCAGAGGATACCGAGGAGCAACCCGAGGACGAAATAGAGGAGTACGAGGACAGTACCCGGAGGTACCTGAACAACTCGTCACCATCCTCGACGGCGAATCCTCCGTCACAACCACAACCTTACGAGGACTGTAGTATGGACAGTAGTAAGATGAGTGCCCGACTTGAGGCCGAAAATGAAATGGACGGGGACGGGGATGAAGAGATGGAAGAACAGCCAGAGAACCTCTCAGGTCGCGGTACTTCGAGTAGACTTGGTCATCAGAGTCTCGGCTATCCTGGTGCCTCTCCCGCAAGCAGCAGTGCCAGTAGCAGTAGCCTCCAAACGACCTTCGCGGGAATTTTATTTCCCACGGGGCCACCACTACCGCCAGTGACTTCGTCCTCCGCCTCGACGATTCATCATCCTCAGCTGATTCACCACGTCTCGTCCAGCGGTGGTGGCACTACTCCCACCGCACCTGGATGTGAAATGATCGTCGATCCTGCCCGTGATCCTGCCATATACTCGAGCCTACTTCCACGACCGGGGAGCAATGACAACTCCTGGGAGAGTCTTATCGAAATTACCAAAACCTCGGAGACGTCGAAGCTTCAGCAGCTGGTTGACAACATCGAGCACAAGTTGACGGATCCTAACCAGTGCGTCATCTGTCACAGGGTACTCTCCTGTAAGAGTGCACTCCAGATGCACTATCGTACTCATACAGGCGAACGGCCATTTAAGTGCAAAATATGTGGCAGAGCCTTCACCACCAAAGGCAACCTTAAGACTCACATGGGGGTGCATCGAGCGAAACCACCCCTCAGGGTTCTTCATCAATGTCCGGTATGTcacaaaaaattcacaaatgcCCTGGTACTTCAGCAGCACATACGACTTCATACGGGCGAACCTACGGATCTCAGTCCGGAACAGATTCAGGCGGCTGAAGTTAATGAATTTCCACCTGGTTACCCACATCATCCTCTGGCGTCGTTTCTCCCCCAGGGATTCCCGGCGCTTCATCCAGCAGGGAGTGGGTTCCCCTTGGGGTTCCCAGGTTCTCGCCAGCACATAGCCGAAAGAACTCCTCATGAGAACGACCTCGACTCGAAGGACTCTCGAGAACATCTGCATCATCCTCTTCTTCCCTCTCATCATCATCTCTCGCACCAACAGAATGCTCAGCATCACTTGCAACTGCATCAACAACACCAAAAGTACTCGGAAGAGCGGAGCTCCACCGCAGGTGATGACGAAATGGCTGAAGATCAAGAAGAGGAGGATGACATCAATCGAGAAGATGATGAGAGGTGCGATGAACGGGAGAGGCGAAGTATGGAGGAGGCTGAAAATGATCCGGAGAGAGATGAAAACGAAGAGgagcatcatcatcatcttcatcatcatcatcatcagcaacagcaacaacggCTGTCGCTACCAAGCTTCTCGACATCTCTGGCGGCCCTCGAGAATCAGGTGCGAACGATCACGACGACAGTGGCTGGTGGTAGCTCCAGGTCACCTGGACCCCACCGATATAACGGAAGTGAAAAGAGCACCAGTCCCCCGGCGATACGAAATGGAAGCGGCGGTGTTCCGCTTGACCTGACCCCACGCTCTTCCTCGACCCCGGTGGGTGGCTCGACGCCTACCCCGACGCCGCCGTCCCCACCGACAGCAGGAGCATCCTTGGCATCGCCATCCGCCTCGTCACAGAGCACAGCGCATCACGCGCATGCTTTCGGAATGTTCGCAGGCCTTCTTAGGGCGGTCTCATCGCCACCGTCGAGTCTCGGTGGTGGCGGCGCCAGCGGCATTGGCGGTAGCAGCACCAGCACTCCCAGCGTATCCGGTACAACGTTAAACAGCGTAGTCTCGATGACCGCTGGGAATCCAGTCCTCGGCGAAGGCGTCGGTAGCGTCGTTGGTGTCAGTGGCGTCGGCGGTGTCGGTGGCAGTAGCGGCGGCGGGGGCGGTAGCggtggtggcggaggtggcggTGAAGGTGCAGGTAGCAGCACTACCGCCACCACCGGAGGAGCACTTGCCTCTCTAACGACGTCAGCCGTTCTCGCTGCCACTTCTACCTACAATCCCCTCGGCCTGGCTGTCGGAGGGCCAGCAGTCCGCGGTAACACGACATGCAATATCTGTTACAAGACGTTCGCTTGTAACTCGGCCTTGGAGATTCACTACCGGAGCCACACGAAGGAACGACCGTTCAAGTGCACCATTTGCGACCGGGGCTTTTCCACGAAGAATGAACGCGAACCCTGGTTGACGAATACGTGTACCTGTGTCGATCGGAGGATCTCCCTATCCAAGACCGGCACCGAGTCCACTAGCACCACTAGCACGACTAGCACCACTATCACCAACATCCCTTCGTCCGAGTCGCATGGCGGCAATCGGACGAGGCCGAAACGCAGGCGGCGACGTCCTGAGGAGAGGAAGCCCCGGGGGCGGACTGGTGGCAACGAATGGGGGCGGGGAGTGATCTCTGGCTACGCTGCTCTCCACCTGCCCCCGATGCTGCCTCCCGCCCTCGGACTTCTCGCCTCGGACCACGTCTTCCTGGGAAACATGAAGCAGCACATGCTCACACACAAGATCCGGGACATGCCGCCTCACCTCTTTGCCGACGCGAAACAGACGggtcagcagcagcagcaaccaCAGCAGCAGGATCATGAGAACTCGAGGAGTCCCATGTGTGCGGATGAGTCGAGTCTACCACCTCCagcacctccaccaccaccaatgCCACCGTCGTCCGTGGAAGCTGTAGTAGCAGCCGCGGCGATGCCTGTCAAGAGGTCACCGCCCGAGGGTGATTTACCTGCGCCCAAGAGGCCGCCCAGCATGCCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCTTCGGCGCTCCAGATCCATATGAGAACACATACGGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAACCTCAAGGTGCACATGGGAACGCATATGTGGACGAacggagcgtcgcgacgaggTCGCCGAATGTCATTGGATCTACCGCCACTGCCCATCACACCCAAGGACTCAGAGTTTCTTCAGCGACGACCGGATCTCTTTTATCCTTATCTACCCGCGCCGTTCCTTAATGGCGTTCAGCAAAAACTGAACGAGATCTCGGTCATACAAAGTAACAATGGACTAACGTCGCCACACAGCGCAAGTGCAGCCAAGTACGCTGGTCTCTTTGGATCTGTCTATGGAGGCGTCGctggtggcggtggcggtgcTGGCGGTGGCGCCGGAGGTGGCGGTATCGCTGCGGGATTCCCTGTTGACAAGCAGCCGATGGCACCGAGTAACGGCTCCCTAGGAGAATCGAAATCCCTATCAGCAGGGTCCATGCTCTTCCGCACACCGTCTCCATCTCATTCACCCGGGACTCCGTCGTCGAACACCGGCAATCAGAATTCCGCCAGTGTACCATCCTGGGGAGGTAGCGATCCGCTGCAGCACAGATTCGAGCGTGAAACTTCGTCCAGGACGGAGGAGAACGCGACTCCGCCAACGGCAAGACTACCACCTACACCGGCGCCAAGAGGGGAAGGTCTGGCAGCCTAG
Protein Sequence: MQLMRWSITRRLESRSNKQRRDIKICQAERTTSPGSRDIAYSQYSGEGIESGSDGEESAGGGIVGGVEGSGGGGGVGGGEVTGGPVDEAVDLRRSHHGEEDERDREDLPMDEDEEDEEGVEDAGDQDEEEEGTRKQVMRHRQDAENNNSFVEGGPPSGIFGPPGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQPTVPGTPTGTGLPGTGVTSTTTTSTTTSTSHPGTPFGNVGGAGSAIGSGTSAGIGGGIARVGSGMGGAACVDTRDISSSTDNKEASPSPTIHPKPLSALTSPPSSRPPSHHRQSSPGLLQSQSQERGTPSASGAGSGGSTSPLSLPLPLSLSLPSSAAAAAAAAAAAAASQMSLSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSSGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPPPPPPPPPPPASSSSSSSSSPSSSSHHPSLCHPGSAAAAAAAAAAAAAAHGFLPPQPPLPLALTLPVLPPLYRSPLLNHREEQEVPENLSKTTVPSPHTSPPVPTGHHHLPLPSSHHPHLHHQSNSHHSSFHEHHPMKQQQHLHHHHAQQQHHLHHHEQTTSIASSAAQRDEIKLEHQSPTQDSYQQQSRPTSREDSERITPKREPEDTEEQPEDEIEEYEDSTRRYLNNSSPSSTANPPSQPQPYEDCSMDSSKMSARLEAENEMDGDGDEEMEEQPENLSGRGTSSRLGHQSLGYPGASPASSSASSSSLQTTFAGILFPTGPPLPPVTSSSASTIHHPQLIHHVSSSGGGTTPTAPGCEMIVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPHHPLASFLPQGFPALHPAGSGFPLGFPGSRQHIAERTPHENDLDSKDSREHLHHPLLPSHHHLSHQQNAQHHLQLHQQHQKYSEERSSTAGDDEMAEDQEEEDDINREDDERCDERERRSMEEAENDPERDENEEEHHHHLHHHHHQQQQQRLSLPSFSTSLAALENQVRTITTTVAGGSSRSPGPHRYNGSEKSTSPPAIRNGSGGVPLDLTPRSSSTPVGGSTPTPTPPSPPTAGASLASPSASSQSTAHHAHAFGMFAGLLRAVSSPPSSLGGGGASGIGGSSTSTPSVSGTTLNSVVSMTAGNPVLGEGVGSVVGVSGVGGVGGSSGGGGGSGGGGGGGEGAGSSTTATTGGALASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNEREPWLTNTCTCVDRRISLSKTGTESTSTTSTTSTTITNIPSSESHGGNRTRPKRRRRRPEERKPRGRTGGNEWGRGVISGYAALHLPPMLPPALGLLASDHVFLGNMKQHMLTHKIRDMPPHLFADAKQTGQQQQQPQQQDHENSRSPMCADESSLPPPAPPPPPMPPSSVEAVVAAAAMPVKRSPPEGDLPAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLTSPHSASAAKYAGLFGSVYGGVAGGGGGAGGGAGGGGIAAGFPVDKQPMAPSNGSLGESKSLSAGSMLFRTPSPSHSPGTPSSNTGNQNSASVPSWGGSDPLQHRFERETSSRTEENATPPTARLPPTPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00298578;
90% Identity: iTF_00253834;
80% Identity: -