Chyl008663.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- stc
- Assembly
- GCA_030295005.1
- Location
- AP025368.1:9382820-9392273[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 2.4e+04 -4.3 1.6 15 19 452 456 451 456 0.81 2 13 0.065 7.8e+02 0.7 1.7 2 10 484 492 484 492 0.92 3 13 3.6e-05 0.44 11.1 18.1 4 19 500 515 498 515 0.93 4 13 1.5e-06 0.018 15.4 11.4 1 18 551 568 551 569 0.94 5 13 8e-05 0.98 9.9 17.1 1 19 610 628 610 628 0.99 6 13 5.6e-05 0.68 10.4 11.5 1 19 669 691 669 691 0.87 7 13 2 2.4e+04 -5.3 2.2 6 10 721 725 721 725 0.94 8 13 0.00076 9.2 6.8 7.1 1 11 731 741 731 742 0.95 9 13 0.14 1.7e+03 -0.4 0.5 4 10 746 752 745 754 0.92 10 13 4.9e-07 0.0059 17.0 14.2 1 19 758 776 748 776 0.87 11 13 0.00091 11 6.6 11.0 9 18 822 831 816 832 0.91 12 13 1.6e-07 0.002 18.5 14.0 1 17 868 886 868 892 0.83 13 13 9.2e-05 1.1 9.8 4.9 1 14 898 910 898 912 0.95
Sequence Information
- Coding Sequence
- ATGTCGCAGTGGAACGGCACATACGCTTACAACGGCCAATATCAAGCTGGTAACGCATGGAATGCCGACATGAACGGTCAATATGTCAATCAACCATATTACCCCAATAGACCAGACTCCAGTGGACAATACGTCAGCTTTAATGAGTTTTTAACCCAAATGCAAACCAACAACCCTGTGCCTAGTAATAGTCAGCATTTTACAAATGTACCATATGAAAATTATGCTTCTGCACAATACAATTACCAAAACATGCCCTCCACATCGCAAGATCCTCATTTAGAAAGTTTTAACTATAATGCAACCACTCCGAATGTGTCTACTAGTGTCAATCCCTCATACCCGGTTAATGTTCAAAATCAATACAACATGAACCCAGCATTCACAAGTGATATGGTTCTTAAGTCTAATCTCACACCTACAGCAACTGAGTTTGTGCCAAAAAGTATGTTAAAGGCTTCATCTAGCAATCAAAATGTGCCTGAAGGACCTAATACTAGTAATAGAACACAGGAACCTGTAAATAATGTAGGTAGTTCATCAAATAGTAATTGGAGAGAAAGGCCACAAAGCTCTCATAGAAATGGTGAACAAAATGGTAGAGACACTAGCAACAGAAATCAGAGAAATAATAGACATCATGATGGTGGCAGTCAGAACAAAGAGTCAAATTATAATGACAATAATAGGAATACTGAATTGCCCCATGACAGCTATAGAAATAATGAACCCAGAAATAGAAGCAATGACACAAACAATCGTAATGGTGAAACTTCACGTGCCTATGAAAGGGGTAGTCACAATCAGGATTCAAATTATCACAGCTCTGACAATAGTAGGAGTTACAACTCTAATGGGCGCAATGATAGAAAAGGGCAATCAAAATCAAACAGCAAAACAAGAATTAAAGATTCAGACGCTCGTACATTTTATAACAGCTCAGTGTCTAAAGACAGCCAAGATGTAAGAAACAACAGAAATGAGGGGTCTTCTAGACCAAAAAATTGGGTGGGTACTCCAAGACTTAGAGGTGGGGACAAAAACAATCCTGATGATGAACAATATAATGGCAGTTATTATCAAAAAGATGATAAGATTGACAGAATAAAATCTGAAAATGTTCCTAGCCCTACAagatctaaaaatagaaatgcaGACCAAGCCCACAAAGAGATGACACAGAGAGAACGTCTTACGGAACAGCTAGACAATGGCACACTGGAATGTCTGGTGTGTTGTGAACGAGTGAAACAAATTGATGCTGTGTGGTGGTGTGGAAATTGTTATCATGTGCTGCATCTCAAGTGCATCAGAAAATGGGCAACAAGCAGTACAGTAGAGGGTAAATGGCGTTGTCCGGCGTGTCAGAACACGAACGACACGATCCCGACGGAGTACCGGTGCATGTGCGGCGCGGTGCGGGCGCCCGAGTACCACCGCGGCATGAGCGGCGCGCACACGTGCGGCAAGTCGTGCAAGCGCCCGCGCGCCTGCCCGCACCCCTGCACGCTGCTGTGCCACCCGGGGCCTTGCCCGCCCTGCCAGGCCACCGTCACCAAaaaatgcGGTTGTGGCGCGGAGACGCGTTCCGTCCTGTGCAGCAGCAAGCTGCCACAGGTGTGCGGGAGAGTGTGCCAGCGCACGCTGCTCTGCACCATGCACAAGTGCACCAAGGAGTGTCACGAAGGACCTTGCGATCTCTGCACTGAAGTCATCACCCAAGTGTGTCCATGCCCGGCGACGCGCTCGCGCACCGTCCCGTGCAGCGCggagacgggcggcagcacgcaGTTCGTGTGCGGCGGCGTGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCCAGCGCTGCCACCCGCCGCCCTGCCAGCCCTGCCCGCTGCTGCCCGACGCCGTCAGGACATGCCCCTGCGGGAAGACCAGGATTGAAAAGGGTCAGCGAAAAGCGTGCACAGATCCAGTTCCTTTGTGTGGCAATATTTGCGCAAAACCACTGACTTGCGGTCCCGATGGAGACAAACATTTCTGCAAGAGCCAATGTCATGAagGAGAGTGCAGCGTTTGCCCAGACAAGACAGTGGTGCAATGTCGCTGCGGGCACACGAGCAGAGAAATACCCTGCGAATATTTAATGGATCACATTGACAATGTGCTGTGCCAGAAAAAATGCAACAAGAAGCTGTCGTGCGGCCGGCACCGGTGTCGCTCAGTGTGCTGCGTGTCGGCGACCCACCGATGCGGCGTGGTGTGCGGCCGCCTACTATCCTGCCAGCAGCACCGCTGTGAAGAATTCTGTCACACGGGGCGCTGCGCCCCCTGCCCGCGCCTCAGCTTTACAGAGTTGCGGTGCGAGTGCGGTACGGAAGTGGTGCTGCCCCCCGTGCCGTGCGGGGCCCGCCGCCCCCCCTGCACCGCGCCCTGCCGCCGGCCCCGCCCCTGCAACCACCCGCCGCACCACTCGTGCCACTCGGGCGACTGTCCGCCCTGCGTCGTGCTCACCACCAAgcgttgccatggcaaccacgagGAGCGAAAGACGATCCCGTGTTCACAAGAGGAGTTCTCGTGCGGATTGCCATGCGGGAAACCACTGCCCTGCGGTAAACACAACTGCATCAAAACATGCCACAAAGGACCCTGCGACGCTGGAAAGTGCACGCAGCCCTGCACGGAGAAGCGTGCAGGGTGCGGGCACCCGTGCGCGGCGCCGTGCCACGTGGGTGCTCCCCCGGGCAGCGCGGCGGCCGCGTGCCCCAGCGCCGCGCCGTGCCGCCGCCTCGTGCGCGCCACCTGCGCCTGCGGCCGCCGCGAGCTGGAGCGCTCCTGCTGCGACAACGCCAGGGACTACGACAGGATGGTGAGCGCACTCGCGGCGACAAAAATCCAGGACGGCGGCTCTGTCGGCTTGGCCGACGTACAACGTCCTGCCAACGTGCTCAAAACTCTGGAGTGCGAGGAGGAGTGTCGCGCGGAGGCCCGTGCGCGGCGGCTGGCGCTGGCGCTGCAGCTGCGCAACCCCGACGTGTCGAGCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCGCAGCGCGAGCCCGCCTTCGCCGCGCACGTGCACGACAAACTCACCGAGCTCGTGCAGCTCGCCAAGAAGTCGAAACAGAAGACCCGTTCGCACTCGTTCCCGTCGATGAACTGGCAGAAGCGTCAGTTCATCCACGAGATGTGCGAACACTTCGGCTGCGAGAGCGTGGCGTACGACGCCGAGCCCAACCGGAACGTCGTCGCCACCGCCGACAGGGAGAAGTCATGGCTGCCGGCGCTGAGCGTGCTGGAGGTGTTGTCTCGCGAGGCGGGCAAGCGCCGCGTGCCGCCGCCAGTACTGCGCGCCTCCACTGCTACCGCCACCGCCGCGCAACACAACAACAAATCATCCGGTGGAGGTTGGGCGACGTTGACATCGACTAACGCGTGGGCAGCTCGCAGCCAGCCCAAGCCGCAGCCACAACAACCATCCACCTCCGACGCCAAGATAGACTACTTCGACAACCCACCAGAAAACTAG
- Protein Sequence
- MSQWNGTYAYNGQYQAGNAWNADMNGQYVNQPYYPNRPDSSGQYVSFNEFLTQMQTNNPVPSNSQHFTNVPYENYASAQYNYQNMPSTSQDPHLESFNYNATTPNVSTSVNPSYPVNVQNQYNMNPAFTSDMVLKSNLTPTATEFVPKSMLKASSSNQNVPEGPNTSNRTQEPVNNVGSSSNSNWRERPQSSHRNGEQNGRDTSNRNQRNNRHHDGGSQNKESNYNDNNRNTELPHDSYRNNEPRNRSNDTNNRNGETSRAYERGSHNQDSNYHSSDNSRSYNSNGRNDRKGQSKSNSKTRIKDSDARTFYNSSVSKDSQDVRNNRNEGSSRPKNWVGTPRLRGGDKNNPDDEQYNGSYYQKDDKIDRIKSENVPSPTRSKNRNADQAHKEMTQRERLTEQLDNGTLECLVCCERVKQIDAVWWCGNCYHVLHLKCIRKWATSSTVEGKWRCPACQNTNDTIPTEYRCMCGAVRAPEYHRGMSGAHTCGKSCKRPRACPHPCTLLCHPGPCPPCQATVTKKCGCGAETRSVLCSSKLPQVCGRVCQRTLLCTMHKCTKECHEGPCDLCTEVITQVCPCPATRSRTVPCSAETGGSTQFVCGGVCARVLACGAHVCRQRCHPPPCQPCPLLPDAVRTCPCGKTRIEKGQRKACTDPVPLCGNICAKPLTCGPDGDKHFCKSQCHEGECSVCPDKTVVQCRCGHTSREIPCEYLMDHIDNVLCQKKCNKKLSCGRHRCRSVCCVSATHRCGVVCGRLLSCQQHRCEEFCHTGRCAPCPRLSFTELRCECGTEVVLPPVPCGARRPPCTAPCRRPRPCNHPPHHSCHSGDCPPCVVLTTKRCHGNHEERKTIPCSQEEFSCGLPCGKPLPCGKHNCIKTCHKGPCDAGKCTQPCTEKRAGCGHPCAAPCHVGAPPGSAAAACPSAAPCRRLVRATCACGRRELERSCCDNARDYDRMVSALAATKIQDGGSVGLADVQRPANVLKTLECEEECRAEARARRLALALQLRNPDVSSKLAPRYSEHVRATAQREPAFAAHVHDKLTELVQLAKKSKQKTRSHSFPSMNWQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADREKSWLPALSVLEVLSREAGKRRVPPPVLRASTATATAAQHNNKSSGGGWATLTSTNAWAARSQPKPQPQQPSTSDAKIDYFDNPPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820619;
- 90% Identity
- iTF_00788208;
- 80% Identity
- -