Chyl019846.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025383.1:6038227-6040144[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.7e-12 3.3e-09 36.7 0.0 2 39 11 48 10 53 0.93
Sequence Information
- Coding Sequence
- ATGGAGAAGAGAAAGTATAATACTTGGAAGCAAGAGGATATGGATGAAGCTTTACAGAAACATCGGAGTGGAGAAATAGGATTTAATGAAGCCTGCAGAAGATTTAATATACCGAAACCTACACTGAgacgacatttaaaaaatttgaatacaaGAACAAAGTTTGGAAGACCTAACGATATGCCACCAGATATGGAAGAGATACTGGCACAGCATTTGATGAATTTAGAGTCTTGTTTCTTCGGATTAACTACCACTGAATTCAGAAAGCTTGCATTTGAGCTCGCTGAAAAATTTCAACTGCCTCATCGTTttaacaaagagaaaaaaatagcGGGCAAAAAGTGGTATTATAGGTTTATGAAAGAGCATCCTAATTTGTCTTTGCGTGTTCCAGAATCAACATCGATGGCCCGAAGCAAAGGGTTCAACAAAGAACGTGTTAATGAGTTTTTTGATAAGTACGAAGAAATACTGGATAAATACAAGTTTGGTGCAcatcaaatatataatatggaCGAAACTGCATTATCCACTGTTCACAAACCTTCTAAAGTTATTGCTCAAAAGGGAAAACACCAAGTGGGTGCAATCACAAGTGGAGAAAGGGGTTTGACCACAACATGCATATGTGCAATGAATGCAGCAGGCGAATTTATACCACCTATGTTAATATTTAAGCGCAGTAGACTGAATGATGCCTTAAAAAAAGGAGCTCCACCAAATACAGCATTTGAATGCTCAAAAAATGGATGGATAACATCAGAACTTTTTGTTCAATGGCTACAACATTACATTAAGTGCACGAGATTAGCAAAAAGtaaccaaaaacaaatattacttttactAGATGGTCATAGCACACACACGAAAAATTTAGAAGCGATCGAGATGGCTCGGGATTACGGCATTGTTATGTTATCTTTTCCTGCTCACACAACTCATCGTCTACAACCGCTGGACAGATCGTTTTTCAAATCATTGAAAAGCTGTTACAACGAGGTCGCATCTTCGTGGCTACGTTCTAATCCTGGTAGTGTCATAAAACAAGCTAATGTTGCAGAACTGCTTGGCACAGCATACCCTCGATCAGTTCGTATGGATATAGCACAAAATGGTTTCAAAGCTACAGGGTTGTGGCCGTGTGACAGAAATGTCATTAAAGCAGAGGATTTCGTAGCTTCTGAATACATCTCTGATCCATCAAATCAAGAACCTAAAGGTCCATCTGAACCAACTACGGAATCACCCACTAGAGCTACATCGCCATCAATAATAACGCAACTAATAGTTGCGTCACCATCAGTATTGGTCGTATCTCCACCACCATCCACCTCATTACCATCACCCCCAAAAATTATAACACCTCCCTTAATACCGAAAGATTCAACGCTGCCCATCGTTCAACCTGAACCGTCCAAGATTGATAAAAATTCCAATAATGAAGAAATAAAGTCTCACTTGAATGTTTTATCTCCATTCTCCGTGTTAGTTATATCTATTTAG
- Protein Sequence
- MEKRKYNTWKQEDMDEALQKHRSGEIGFNEACRRFNIPKPTLRRHLKNLNTRTKFGRPNDMPPDMEEILAQHLMNLESCFFGLTTTEFRKLAFELAEKFQLPHRFNKEKKIAGKKWYYRFMKEHPNLSLRVPESTSMARSKGFNKERVNEFFDKYEEILDKYKFGAHQIYNMDETALSTVHKPSKVIAQKGKHQVGAITSGERGLTTTCICAMNAAGEFIPPMLIFKRSRLNDALKKGAPPNTAFECSKNGWITSELFVQWLQHYIKCTRLAKSNQKQILLLLDGHSTHTKNLEAIEMARDYGIVMLSFPAHTTHRLQPLDRSFFKSLKSCYNEVASSWLRSNPGSVIKQANVAELLGTAYPRSVRMDIAQNGFKATGLWPCDRNVIKAEDFVASEYISDPSNQEPKGPSEPTTESPTRATSPSIITQLIVASPSVLVVSPPPSTSLPSPPKIITPPLIPKDSTLPIVQPEPSKIDKNSNNEEIKSHLNVLSPFSVLVISI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00007946;
- 90% Identity
- iTF_01152030; iTF_01295040;
- 80% Identity
- -