Chyl016287.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- retn_1
- Assembly
- GCA_030295005.1
- Location
- AP025378.1:7846417-7858096[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-20 1.5e-16 61.0 0.0 15 89 100 172 95 172 0.94
Sequence Information
- Coding Sequence
- ATGGGCGAGTGGGAgcggcgccgcgcccgccgcgatTGGCCGCCCGCGGGGTTCAGGGGCGCAAGGGCCTTGATACCGCTCTCGATAAGTGGTAGGCGGCGGATTCGATACGATCGATTATCACCCGTGTTGTCGCTAGCACTCTCGCCGAGCCGCCGCGCCGGCCCCGGAGGCGGCGGCCTGCGCGCGGAACTCCTCGCCGCTCCCGACTCCAGCACCGCCAAGACAATATTATTACCGCAATGTCAACGCGACCCCTTTTACGATCCGTCTAAATTAGCAATTCGCGATTTAAAACTCTCCGGTACACCGATCAACCGGCTGCCAATAATGGCCAAGTCTGTGCTGGACCTGTACGAGCTGTACAACTTGGTGATAGCTCGCGGCGGGCTGGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATTATCAAGGGTCTGCGGCTCCCGTCCTCCATCACTTCTGCTGCCTTCACTCTGCGTACACAATACATGAAGTACTTGTACGACTATGAGTGCGAGAAGAAAAACTTGTCTACTCGCAGTGAGCTGGACGCCGCCATCGAAGGCAACAAGCGTGAGGGCAGGCGCGCCTCCGGGCAGTACGACGCTCAGGCGGCGTTGGCTATGCCGCCGCTGAACCGCGGAGTGCCAGCGTCTCTAGCGCAGCTGTCCCAGCACATGCAGCCGTTGTCACTATCCCTGGGCGGAGGGGTGGGGGTGCCACGGCTTCCCCCCCTGCCCCCACACGCCCCGCATATCTCTCAGCACGACATCGAGTACCGCGTGAGGGAGTACATGAAGATGATTCAACAGCAGAGGGAGCTGATGAGGAATGGTTCGGAGTCTCCTCCAGGCGGTAACGGCCCAGCCCCGATGATGTCTCCGCGCGACGCCGCCGCACTCAGCGCCATCGACGTGTCGCGCCTCACGCTGTGGTCGCtctacaacaacaacaacaacaacagccCGCAACCGGACCTTGAACCGCAAcgTGAGGCGCTAAACCTAAGCGAGAGTCCCAACTCTAGCACCAGCGGCGGCAAGCGCGAGGCATGTCGCTCCCCTCCCCCGCCGGCGAAGCGCCGCACCCCGCGCCCCGCGTCCCCCCGCCTCACCCCGCCGCCCCGCCAGCAGTGCATGCCCACCACGCCGCAGCCGCAACTCAACGGAGGCAGCGCCACTAATGGCGTCAATGGAGCGGCTTTTAAGATAACTACTAGAgGTGACGCAAGCACAGGCGATCAGCAACTAGTTGTGTCGATAGAACTGAACGGAGTGACGTACGAAGGCGTCCTATTTCCCTCACAAAACGGCAACGGTCAAAACGGTCACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MGEWERRRARRDWPPAGFRGARALIPLSISGRRRIRYDRLSPVLSLALSPSRRAGPGGGGLRAELLAAPDSSTAKTILLPQCQRDPFYDPSKLAIRDLKLSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGGNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPASPRLTPPPRQQCMPTTPQPQLNGGSATNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341121; iTF_00063364; iTF_01010151;
- 90% Identity
- iTF_00858329;
- 80% Identity
- -