Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637485.1:16149984-16162450[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.32 24 6.7 0.2 2 23 116 137 115 137 0.96

2 17 0.13 10 7.9 0.1 2 23 141 163 140 163 0.88

3 17 0.073 5.7 8.7 1.0 2 23 399 421 398 421 0.95

4 17 0.068 5.2 8.8 0.1 1 20 429 448 429 450 0.94

5 17 0.046 3.6 9.4 0.9 3 23 461 481 460 481 0.96

6 17 4.5 3.5e+02 3.1 0.5 1 12 497 508 497 520 0.71

7 17 0.0031 0.24 13.1 2.2 1 21 529 549 529 553 0.92

8 17 0.49 38 6.1 0.5 2 23 628 650 627 650 0.84

9 17 5.9e-05 0.0046 18.5 1.8 1 23 684 706 684 706 0.97

10 17 2.2e-05 0.0017 19.8 1.6 1 23 713 735 713 735 0.98

11 17 0.00014 0.011 17.3 2.3 1 23 740 762 740 762 0.96

12 17 0.0078 0.6 11.8 3.2 1 23 768 790 768 790 0.97

13 17 5e-05 0.0039 18.7 1.1 1 23 796 818 796 818 0.94

14 17 0.00051 0.039 15.5 2.6 2 23 825 846 825 846 0.98

15 17 0.00057 0.044 15.4 0.6 2 23 855 877 854 877 0.97

16 17 0.00052 0.04 15.5 0.1 1 23 882 904 882 904 0.98

17 17 0.14 11 7.8 3.9 1 23 910 933 910 933 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.32	24	6.7	0.2	2	23	116	137	115	137	0.96
2	17	0.13	10	7.9	0.1	2	23	141	163	140	163	0.88
3	17	0.073	5.7	8.7	1.0	2	23	399	421	398	421	0.95
4	17	0.068	5.2	8.8	0.1	1	20	429	448	429	450	0.94
5	17	0.046	3.6	9.4	0.9	3	23	461	481	460	481	0.96
6	17	4.5	3.5e+02	3.1	0.5	1	12	497	508	497	520	0.71
7	17	0.0031	0.24	13.1	2.2	1	21	529	549	529	553	0.92
8	17	0.49	38	6.1	0.5	2	23	628	650	627	650	0.84
9	17	5.9e-05	0.0046	18.5	1.8	1	23	684	706	684	706	0.97
10	17	2.2e-05	0.0017	19.8	1.6	1	23	713	735	713	735	0.98
11	17	0.00014	0.011	17.3	2.3	1	23	740	762	740	762	0.96
12	17	0.0078	0.6	11.8	3.2	1	23	768	790	768	790	0.97
13	17	5e-05	0.0039	18.7	1.1	1	23	796	818	796	818	0.94
14	17	0.00051	0.039	15.5	2.6	2	23	825	846	825	846	0.98
15	17	0.00057	0.044	15.4	0.6	2	23	855	877	854	877	0.97
16	17	0.00052	0.04	15.5	0.1	1	23	882	904	882	904	0.98
17	17	0.14	11	7.8	3.9	1	23	910	933	910	933	0.97

Sequence Information

Coding Sequence: ATGTCTTCTGACGAATCTGACGACGAACCACTCGCCGTTATAGCGACGGCGAAGAAGCTGAATCCGGAGAAATATGAGGGACTTACCATTGAACTTTGTAAAGATGAACCGGccaagaaaaagaagaaaaacataccgAACAGGAAAATGAATGCCATGACGATTAAGATCAATCGTGCGTTGAAGGCAGTGGTAGCTCCTCCAGTTGTGGAGAGGCCTATGGATGTGTGGCTGTACTTGAAAGACCTCAATCCAACTGGGCCTTACAGTTGTTTGCTTTGCCCGGATTGGTTCATCAACAGAGGCAAAATGATTTTACACTACGTGCTGAATCACAAGAAAGACTATTGTGGTATCTGCAGATACTTTGTGCCTGACCGAGAAACTTGGCAAGCGCACCAAAAATTCCACGTGCCATGGCCCTGCTCTCAGTGTGTCCAGAACTTTGACACTGAAGCCCAGCTGCGACAGCACTTCAGCGCCGAACACAAGCTCGTTCATTGCCGACTCTGCCACTTCAGAGTACCTGACGATGACCAGTATAATACACACCTAATACAGAAACACAGTGTCACAAACCTCTCTAGCAAAGACGAAGATACTTTATGGGAATTCGAATATGAAGGCAGCAACAAATTCCTATGTCTACTCTGCACAAAATCAAATAATCTATGCACAATGTTCTTCAATCATTATATGGGATATCACCACTACACACTCAAATGCCTAAGCAGCATTCTCTCTGGTAGAGACTTACCGTTTGTCATCAGCGGAGCTGATGTCAGTCCACAGTTCATTGATGATCAACTTAAAGATCATTCCAGAGTTGGTTATGTAGACTTGCAAGCACCTGCAGAGAAGGTAAACGAAGATCATTGTGATGATGAGTCACAGGATATATTGAAAGTTTTGATACCGGAAATTAAACAGGAGGCTGTGAGTGAACCGGAAGAGACCGAAAAAGGAGATGAAAAAGAGGAGAAGAAAAAGAAAGTCAGAGATGAAAATGACATTGCAAATGTCTATAAAGGTGATGAAGACTTTGATGTCACATTAACAGAGTTGATAATATTACAAAAATGCTATTACGAATACGTAAATCAGACTCTAAACGACATAAACTCTAATTTGGTTCCTGAAATATCTGACATAGACTATACAACAGCAAAGCCTGACTTACCAACAGTAGATATACCTTGTTCTCTTTGTAAAAATAAGTTCAATAATGTACAAACATTTACGTCTCACATGATTAAGAGTCATCTGATGAAAACAGCACCAATATATTCATGTAGGGTATGCACAGCTACATTTGAGAATCAGGGAGAGCTGGATAGTCATGTGACGGAAGAGTTAGGAGACTTTGAGGACCTGTGGCTGTGTCAGTTTTGCGAGAAAGAATTTGATAATAGAGAAGAGACAAGGAGGCATCTGTCGGAACACTGGGAGGTTATGGAGTTTGACAACTGTTTTAGTCCGCACTTGGGCTTCAAATGCAAATACTGTCCGACTCTGTTCTGGAATGAGACGGATAGAGAGACGCATGAAGTGCGTGTGCATTTTAGTCAGTATACAGATCAGTTTTACAAATGTGAAGATTGTTCGGAAACATTCAGTGATAAGGTTTTCTTCATCCACCACTACATAGAGAAGCAGCACAGCTCCAACTCCCCAGTATACTTGCTGAAGTGCTGCATCTGCTGCGTCGTCCAACCCAGCATCGAGGAGATGAGGGCACACTTCGAGGGCAAGCACCCGGAGGCGAGGAAGGTGTTCTGTTCTATGGACGCGTGCCAGTACCGCCCGCTGAGCCATCGGAAGTCGTTCAAGTTTCATTTAAGGACGATCCACGATCCAACGGCGCGGCCGCAGCGGCCCGTATCCTGCACCGTCTGCGGACGGGACTTCGTCAGCTCCCGCGCTTGCGGCACGCACATGGCGCAAGTTCACGGCCCTGGCAAGTTCAAGTGCAAGTTGTGTCGAGAAGTCATGCATACGTTGGACGAGAGAAAACTCCACTACCTGATCCGGCACCCGGGCCGGCACCCGTTCGAGTGTTCCGAGTGCGGCAAGTCCTTCCAGTACAAGTCCTCGTTGTACATGCACAAGCAAGAGCACTCGCCCAACAAACAGAGCTACACGTGCACCTACTGCTCTAAAGTGTTCGCGAAACGCGACTCATTCCGCGAGCACCTCCAAATCCACGAGGGCCCCCGGCACGCGTGCTCCTACTGCCCAATGCGTTTCGTGCAGCGCTCGAACATGTTGCGTCACGAGCGGCGGCACACAGGCGAACGACCCTACGCCTGTTCCCACTGCCCGCGCACGTTCGCGGACAAGGGCGCGTGCACCTCGCACTCCAGGACACATTCCAAAGACACTTCGTACGCCTGTATCTATTGCGGGCAGACGTTTGTTCAGAAATCTAAACTTACATATCATATCAGAAAACACACGGGTGAAAACTTGGAGACTTGTACAATCTGTTCCAAATTGTTTACTAGTGCTTGTTCCTTGCGCGAACATATGAAAATACACCAGGCGAAACAAAAGGAGGCGGTTCAATGTCCTCTGTGTGATAAGAAGTACCAAGATGAGCGTTACATGCTCCGTCACCTCCGCACCTCTCACACGCGCAGCTCGTTCCCCTGTCCTCTGTGTGACAAGGCCTTAACAAGTATGGCCGGCTTGCGGCATCACGTGCTTACACACAGCAGTCTTAACACGTTCCGGTGTAAATGCTGCCCAAAATCCTACGCGGTGAAACGCTCGGTAGTAAAGCACCTCAGAAAAAGGCACGGATTGAAAGGCacagaaataaacctaaaagaCTACTTCAGGCGCGTTGACCCTCGCGACTGTAACCTAGGTCTCGATGACGAAGCTATGACCAAAATATTCGGACCGCCAAAGAAAACCGtgaacgatatactgatgggtGATTTCGTCACGCTCACCAAAAAGTTAACATTTACCGGTAATGACGGCGATGGTAATGACGGGGTGGGTAATGACGACAGTGATGACACAAATGACGACGAGGATGATGGTAATGAAAATGATTCTGAGGATGATAATGAAGTGGTGAAGGAGGAAATACGTACGGTGACTATAAAAATTGAGAAGGACGATGGAGATGGATTGGAGCCGACTGATTTTGTTAGCGTTAAAGTTGAGCCTATGGATGAAGACCAGGCATCAGATTAA
Protein Sequence: MSSDESDDEPLAVIATAKKLNPEKYEGLTIELCKDEPAKKKKKNIPNRKMNAMTIKINRALKAVVAPPVVERPMDVWLYLKDLNPTGPYSCLLCPDWFINRGKMILHYVLNHKKDYCGICRYFVPDRETWQAHQKFHVPWPCSQCVQNFDTEAQLRQHFSAEHKLVHCRLCHFRVPDDDQYNTHLIQKHSVTNLSSKDEDTLWEFEYEGSNKFLCLLCTKSNNLCTMFFNHYMGYHHYTLKCLSSILSGRDLPFVISGADVSPQFIDDQLKDHSRVGYVDLQAPAEKVNEDHCDDESQDILKVLIPEIKQEAVSEPEETEKGDEKEEKKKKVRDENDIANVYKGDEDFDVTLTELIILQKCYYEYVNQTLNDINSNLVPEISDIDYTTAKPDLPTVDIPCSLCKNKFNNVQTFTSHMIKSHLMKTAPIYSCRVCTATFENQGELDSHVTEELGDFEDLWLCQFCEKEFDNREETRRHLSEHWEVMEFDNCFSPHLGFKCKYCPTLFWNETDRETHEVRVHFSQYTDQFYKCEDCSETFSDKVFFIHHYIEKQHSSNSPVYLLKCCICCVVQPSIEEMRAHFEGKHPEARKVFCSMDACQYRPLSHRKSFKFHLRTIHDPTARPQRPVSCTVCGRDFVSSRACGTHMAQVHGPGKFKCKLCREVMHTLDERKLHYLIRHPGRHPFECSECGKSFQYKSSLYMHKQEHSPNKQSYTCTYCSKVFAKRDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACSHCPRTFADKGACTSHSRTHSKDTSYACIYCGQTFVQKSKLTYHIRKHTGENLETCTICSKLFTSACSLREHMKIHQAKQKEAVQCPLCDKKYQDERYMLRHLRTSHTRSSFPCPLCDKALTSMAGLRHHVLTHSSLNTFRCKCCPKSYAVKRSVVKHLRKRHGLKGTEINLKDYFRRVDPRDCNLGLDDEAMTKIFGPPKKTVNDILMGDFVTLTKKLTFTGNDGDGNDGVGNDDSDDTNDDEDDGNENDSEDDNEVVKEEIRTVTIKIEKDDGDGLEPTDFVSVKVEPMDEDQASD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00411840;
90% Identity: iTF_01072896;
80% Identity: -