Ccan022414.1
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- kn
- Assembly
- GCA_951800055.1
- Location
- OX637484.1:12896950-12906998[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-43 3.9e-39 135.6 0.0 11 119 118 216 109 230 0.89
Sequence Information
- Coding Sequence
- ATGTGGCGCCACCTAGAGCAGTCGCGCCGTCCCGCTCGTGAGGCGAGGGCGTGTCCCCAGGGCGCCTCCCCCAGTCCGCGGGGACGGGGGCGCTGCCAGGGCACTCGGCGCTCTCCCGCGACGCTTTGTTCGTCGGTGATTCGGGCCGGGTTCGCGATTCGGTCGGACGAGCTGaacgcggcggcgggcgggtaCTCGGGCTCGCCGTGGCCGCCGCTCGAGCTCGACCCGGTGGGATGGGGACGGAAGCTGTACCCGCCGGCCGCGCCGAGGTCTTCAGGAGGGCTGATGTTCGGCCTGCACCACCAGGATGCGGGCGGGCTGCACGCGCAGCCGCGCGGCCCCGTCACCTCGCTCAAAGAGGAGCCGCTCACCCGCGCTTGGATGACACCCAGCTCGCTAGTTGACAATACCAATACCGTAGGCGTCGGCCGCGCACACTTCGAGAAGCAGCCGCCGAGCAACCTGCGCAAGAGCAACTTCTTTCACTTCGTGGTGGCGCTGTACGACCGCTCCGGGCAGCCGGTGGAGATCGAGCGCACCGCCTTCATCGGCTTCATTGAGAAGGACCAGGAAGCCGAGGGTCAGAAGACTAACAACGGGATCCAGTATAGGCTACAATTACTTTATGCAAATGGTAAGTCAATCAACACAGGACATTCGTGCGGCATGGTTCTATCTATTGCGCACATTTTATTCAGAAACATGAAATAG
- Protein Sequence
- MWRHLEQSRRPAREARACPQGASPSPRGRGRCQGTRRSPATLCSSVIRAGFAIRSDELNAAAGGYSGSPWPPLELDPVGWGRKLYPPAAPRSSGGLMFGLHHQDAGGLHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNTVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRSGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGKSINTGHSCGMVLSIAHILFRNMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01133512; iTF_00410066; iTF_00409075; iTF_00772664; iTF_00149165;
- 90% Identity
- iTF_00149165; iTF_00148276; iTF_00772664;
- 80% Identity
- -