Atur030163.1
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- kn
- Assembly
- GCA_905147355.1
- Location
- LR990292.1:8156653-8175989[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.41 8e+03 -3.6 0.1 487 511 44 68 35 76 0.72 2 2 6e-54 1.2e-49 170.9 0.0 11 135 131 245 122 248 0.93
Sequence Information
- Coding Sequence
- ATGGATGGATGGATTTTCGAACGTATGTGTGAATACTCCTACTCTGAagaaataggGCAGTCGCGCCGTCCCGCTCGCGAGGTGAGGGCGTGTCCCCAGGGCGCCTCCCCAGTCCGCGGGGACGGGGGCGCTGCGGCCGGGGCTCTCGGCTCTCCCGCGACGCTTTGTTCGTGCGCGGTTCGGGCGCGGTTCGCGATTCGGTCGGACGAGCTAaacgcggcggcgggcgggtaCACGGGCTCGCCGTGGCCGCCGCTGGAACTCGACCCCGTGGGATGGGGACGGAAGCTGTATCCGCCGGGTGCGCCGAGGTCttcagGGGGGCTGATGTTCGGCCTGCACCACCAGGAGGCGGGTGGGTTGCATGCGCAACCCCGCGGCCCCGTCACCTCGCTCAAAGAAGAGCCCCTCACGCGCGCTTGGATGACCCCCAGCTCGCTAGTTGACAACTCCAATACCGTAGGAGTCGGCCGCGCTCACTTCGAGAAGCAGCCGCCGAGCAACCTGCGCAAGAGCAACTTCTTCCACTTCGTAGTCGCGTTGTACGACCGCTCCGGCCAGCCTGTTGAAATTGAACGCACTGCCTTCATCGGCTTTATTGAGAAGGACCAGGAAGCCGAAGGACAGAAGACAAACAACGGCATCCAGTATAGGCTACAATTACTTTATGCAAATGGTATTAGACAAGAACAAGACATATTTGTGCGACTAATAGACTCAGTAACGAAACAGGTAAGTGTCCCATTTTGA
- Protein Sequence
- MDGWIFERMCEYSYSEEIGQSRRPAREVRACPQGASPVRGDGGAAAGALGSPATLCSCAVRARFAIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPPGAPRSSGGLMFGLHHQEAGGLHAQPRGPVTSLKEEPLTRAWMTPSSLVDNSNTVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRSGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQVSVPF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00289414;
- 90% Identity
- iTF_00289414;
- 80% Identity
- -