Basic Information

Insect: Celastrina argiolus
Gene Symbol: -
Assembly: GCA_905187575.1
Location: LR994578.1:4736421-4740311[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0011 0.12 13.6 0.5 1 23 260 283 260 283 0.93

2 10 0.05 5.2 8.4 0.0 2 23 310 331 309 331 0.96

3 10 0.043 4.5 8.6 0.3 2 23 354 375 353 375 0.96

4 10 0.13 13 7.1 0.3 1 23 379 401 379 401 0.88

5 10 0.1 11 7.4 3.4 1 23 406 429 406 429 0.96

6 10 0.00056 0.058 14.5 1.0 2 23 437 459 436 459 0.95

7 10 4.8e-05 0.0049 17.9 3.4 2 23 467 489 466 489 0.96

8 10 0.0016 0.17 13.1 3.0 1 23 495 517 495 517 0.97

9 10 5.3e-06 0.00055 20.9 0.6 1 23 523 545 523 545 0.99

10 10 0.00016 0.017 16.2 5.0 1 23 551 574 551 574 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0011	0.12	13.6	0.5	1	23	260	283	260	283	0.93
2	10	0.05	5.2	8.4	0.0	2	23	310	331	309	331	0.96
3	10	0.043	4.5	8.6	0.3	2	23	354	375	353	375	0.96
4	10	0.13	13	7.1	0.3	1	23	379	401	379	401	0.88
5	10	0.1	11	7.4	3.4	1	23	406	429	406	429	0.96
6	10	0.00056	0.058	14.5	1.0	2	23	437	459	436	459	0.95
7	10	4.8e-05	0.0049	17.9	3.4	2	23	467	489	466	489	0.96
8	10	0.0016	0.17	13.1	3.0	1	23	495	517	495	517	0.97
9	10	5.3e-06	0.00055	20.9	0.6	1	23	523	545	523	545	0.99
10	10	0.00016	0.017	16.2	5.0	1	23	551	574	551	574	0.98

Sequence Information

Coding Sequence: ATGAGTTACGAAATAAATAAGGTACTTATTTCAAATGAGCGATGTAAATGTTGTTTAGAGGAGAACAAAATATTGTTAAGTTTGTGGGAAGAGAACAACTCAAATGGCGAACTAGAGGTTTACGGCCAAATGCTGACAGAATGCTTTTCCCTGAATTGGCTAACCCCATCAGAAGCATTTAATGAACAAATTTGCCAGCCTTGTGTATCCAGACTCAAAGATGCTGTTAGTTTTAAAAAAGTTGTTTTACTCTCGGAACAATTACTTGCAGAACAACTGGAAAAAGTGTCAAAAGATGCAGTTAAAGAAGAGAAGGAAGATTCTGACACAGAGTTCGCAGTGGAATATATGAATATGGATTATGAAGATGATGAATATATTAAAAAAGCTTCAGATCCAACAGAACATGGTAACAATCCAACAGAAGATGATAAGAAAAATTTGGAACACATTAAAATAGAAGTAGAAACACTTGAAGGTAAAGAGGAATTAAAGTCGAGCAAGCGATACAAAAAATATACTGAAGAAGACCTCCAGAAGTGTATGGAAGCAGTGAGAAACAAGTCCATGTCTCAAATAAAAGCCTCTTTGGCGTACAAAGTCCCCGTACGGACAATAAGAGAAGTTTTACAGCAGGAGGGACTCAAGAAGGATAAAAAGTCGAAGAAGCCGCGTGTCAAAGTGAGAGGCAAAGAGTTGGAGCAGCAGAGCCACAACATCGGCATCGTCCTGAACAACACCAACGCCACGCCCATCCGCTGCCGCAGCGACATCGGCTACGCGTGCTGCTTCTGCGACGCCGCCTACCCCGACCCCGCCCACCTTAAGCGGCACACCCTCGCCGCCCACGACCACGACACCAGGCGGAACTTCGCCAAGGGCAAGAGGCTCTGGGAGTTCGTCGTGAAACTGGACATCACCGGGCTGCAGTGCGAGATCTGCCAGCGGCCTCTCCGGGGCCTCGACGACATGATGGACCACCTTGAGAGCCACCGGCTGACCCTGTTCCGGGATCTCGACAACCACATCCTGCCGTTCAAGTTCGAGGGTGACGAACTGCGGTGCGTCATTTGCGAGGGCATGTTCAACAAGTTCAAGGGCCTCCTCGAGCACATGAGCCGCCACTACCGCAACTACGTCTGCGATGTCTGCGACCTGGGCTTCGTCAGCAAGTGCATACTGATGCTGCACAAGGAGGGGCACAAGACTGGCGCCTTCGCCTGCTCCTACTGCAGCAAAGTGTGCGACACCCTCCGCAAGAAGAAGTCGCACGAGCGCTCCGTCCATATACACTCGCAGCTGATCAGCAAGTGCGGGTACTGCGGGGAGAAGTTCAGCACGTACAGGAAGAAGCAGAAGCACATAGCGAGCGTGCACGGCGTCGACATCGGCGAGGTCAAGTGCCACGCCTGCGATCGCTGCTTCGCGACGCAGAGCGCTCTGAGAATACACACGAAGAGAGACCACCTGATGGAGAGGAGGTTCTGTTGCAAAATATGCGACATGAGATTCTTCGCGAGCAGGGAGCTGACCTCACACATGGTGAAGCACACGGGCGTGCGGGCGTTCCAGTGCGAGATATGTTTGAAGGCGTTCGGCACGAAGAAAACCTTGCGGGAACACCTGCGGATACACGCCAACGATAGGCGGTTCAAGTGCGAACACTGCAACCAGGCGTTCGTCCAGAACTGCAGCTTGAAGGGACACCTGCGCTCGAAACACGGTGTTAATATTTAA
Protein Sequence: MSYEINKVLISNERCKCCLEENKILLSLWEENNSNGELEVYGQMLTECFSLNWLTPSEAFNEQICQPCVSRLKDAVSFKKVVLLSEQLLAEQLEKVSKDAVKEEKEDSDTEFAVEYMNMDYEDDEYIKKASDPTEHGNNPTEDDKKNLEHIKIEVETLEGKEELKSSKRYKKYTEEDLQKCMEAVRNKSMSQIKASLAYKVPVRTIREVLQQEGLKKDKKSKKPRVKVRGKELEQQSHNIGIVLNNTNATPIRCRSDIGYACCFCDAAYPDPAHLKRHTLAAHDHDTRRNFAKGKRLWEFVVKLDITGLQCEICQRPLRGLDDMMDHLESHRLTLFRDLDNHILPFKFEGDELRCVICEGMFNKFKGLLEHMSRHYRNYVCDVCDLGFVSKCILMLHKEGHKTGAFACSYCSKVCDTLRKKKSHERSVHIHSQLISKCGYCGEKFSTYRKKQKHIASVHGVDIGEVKCHACDRCFATQSALRIHTKRDHLMERRFCCKICDMRFFASRELTSHMVKHTGVRAFQCEICLKAFGTKKTLREHLRIHANDRRFKCEHCNQAFVQNCSLKGHLRSKHGVNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01217809;
90% Identity: iTF_01178983;
80% Identity: iTF_00288816;