Carg013672.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- -
- Assembly
- GCA_905187575.1
- Location
- LR994578.1:4736421-4740311[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-08 5.3e-05 23.5 0.0 1 39 174 212 174 217 0.94
Sequence Information
- Coding Sequence
- ATGAGTTACGAAATAAATAAGGTACTTATTTCAAATGAGCGATGTAAATGTTGTTTAGAGGAGAACAAAATATTGTTAAGTTTGTGGGAAGAGAACAACTCAAATGGCGAACTAGAGGTTTACGGCCAAATGCTGACAGAATGCTTTTCCCTGAATTGGCTAACCCCATCAGAAGCATTTAATGAACAAATTTGCCAGCCTTGTGTATCCAGACTCAAAGATGCTGTTAGTTTTAAAAAAGTTGTTTTACTCTCGGAACAATTACTTGCAGAACAACTGGAAAAAGTGTCAAAAGATGCAGTTAAAGAAGAGAAGGAAGATTCTGACACAGAGTTCGCAGTGGAATATATGAATATGGATTATGAAGATGATGAATATATTAAAAAAGCTTCAGATCCAACAGAACATGGTAACAATCCAACAGAAGATGATAAGAAAAATTTGGAACACATTAAAATAGAAGTAGAAACACTTGAAGGTAAAGAGGAATTAAAGTCGAGCAAGCGATACAAAAAATATACTGAAGAAGACCTCCAGAAGTGTATGGAAGCAGTGAGAAACAAGTCCATGTCTCAAATAAAAGCCTCTTTGGCGTACAAAGTCCCCGTACGGACAATAAGAGAAGTTTTACAGCAGGAGGGACTCAAGAAGGATAAAAAGTCGAAGAAGCCGCGTGTCAAAGTGAGAGGCAAAGAGTTGGAGCAGCAGAGCCACAACATCGGCATCGTCCTGAACAACACCAACGCCACGCCCATCCGCTGCCGCAGCGACATCGGCTACGCGTGCTGCTTCTGCGACGCCGCCTACCCCGACCCCGCCCACCTTAAGCGGCACACCCTCGCCGCCCACGACCACGACACCAGGCGGAACTTCGCCAAGGGCAAGAGGCTCTGGGAGTTCGTCGTGAAACTGGACATCACCGGGCTGCAGTGCGAGATCTGCCAGCGGCCTCTCCGGGGCCTCGACGACATGATGGACCACCTTGAGAGCCACCGGCTGACCCTGTTCCGGGATCTCGACAACCACATCCTGCCGTTCAAGTTCGAGGGTGACGAACTGCGGTGCGTCATTTGCGAGGGCATGTTCAACAAGTTCAAGGGCCTCCTCGAGCACATGAGCCGCCACTACCGCAACTACGTCTGCGATGTCTGCGACCTGGGCTTCGTCAGCAAGTGCATACTGATGCTGCACAAGGAGGGGCACAAGACTGGCGCCTTCGCCTGCTCCTACTGCAGCAAAGTGTGCGACACCCTCCGCAAGAAGAAGTCGCACGAGCGCTCCGTCCATATACACTCGCAGCTGATCAGCAAGTGCGGGTACTGCGGGGAGAAGTTCAGCACGTACAGGAAGAAGCAGAAGCACATAGCGAGCGTGCACGGCGTCGACATCGGCGAGGTCAAGTGCCACGCCTGCGATCGCTGCTTCGCGACGCAGAGCGCTCTGAGAATACACACGAAGAGAGACCACCTGATGGAGAGGAGGTTCTGTTGCAAAATATGCGACATGAGATTCTTCGCGAGCAGGGAGCTGACCTCACACATGGTGAAGCACACGGGCGTGCGGGCGTTCCAGTGCGAGATATGTTTGAAGGCGTTCGGCACGAAGAAAACCTTGCGGGAACACCTGCGGATACACGCCAACGATAGGCGGTTCAAGTGCGAACACTGCAACCAGGCGTTCGTCCAGAACTGCAGCTTGAAGGGACACCTGCGCTCGAAACACGGTGTTAATATTTAA
- Protein Sequence
- MSYEINKVLISNERCKCCLEENKILLSLWEENNSNGELEVYGQMLTECFSLNWLTPSEAFNEQICQPCVSRLKDAVSFKKVVLLSEQLLAEQLEKVSKDAVKEEKEDSDTEFAVEYMNMDYEDDEYIKKASDPTEHGNNPTEDDKKNLEHIKIEVETLEGKEELKSSKRYKKYTEEDLQKCMEAVRNKSMSQIKASLAYKVPVRTIREVLQQEGLKKDKKSKKPRVKVRGKELEQQSHNIGIVLNNTNATPIRCRSDIGYACCFCDAAYPDPAHLKRHTLAAHDHDTRRNFAKGKRLWEFVVKLDITGLQCEICQRPLRGLDDMMDHLESHRLTLFRDLDNHILPFKFEGDELRCVICEGMFNKFKGLLEHMSRHYRNYVCDVCDLGFVSKCILMLHKEGHKTGAFACSYCSKVCDTLRKKKSHERSVHIHSQLISKCGYCGEKFSTYRKKQKHIASVHGVDIGEVKCHACDRCFATQSALRIHTKRDHLMERRFCCKICDMRFFASRELTSHMVKHTGVRAFQCEICLKAFGTKKTLREHLRIHANDRRFKCEHCNQAFVQNCSLKGHLRSKHGVNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01217809;
- 90% Identity
- iTF_01178983;
- 80% Identity
- iTF_00289124;