Clyc000944.2
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- -
- Assembly
- GCA_002930495.1
- Location
- MOOZ01000060.1:2893317-2902640[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.042 3.3 9.0 1.3 3 23 307 328 306 328 0.96 2 23 0.041 3.2 9.0 0.6 1 22 699 720 699 720 0.95 3 23 5.9 4.7e+02 2.2 0.3 1 22 763 784 763 786 0.82 4 23 0.0037 0.29 12.3 0.4 3 21 797 815 795 816 0.94 5 23 1 84 4.6 0.1 2 23 824 846 823 846 0.88 6 23 0.0053 0.42 11.8 0.1 3 23 867 888 865 888 0.96 7 23 0.0074 0.6 11.3 2.3 1 23 894 917 894 917 0.95 8 23 0.11 8.8 7.6 0.0 1 23 944 967 944 967 0.90 9 23 0.016 1.3 10.2 3.4 1 23 972 994 972 994 0.97 10 23 0.01 0.81 10.9 0.2 1 23 1000 1023 1000 1023 0.95 11 23 0.002 0.16 13.1 1.3 1 23 1036 1058 1036 1058 0.97 12 23 0.00016 0.012 16.6 1.8 1 23 1107 1130 1107 1130 0.97 13 23 0.0053 0.42 11.8 1.7 1 23 1195 1218 1195 1218 0.96 14 23 0.0013 0.1 13.7 1.3 3 23 1243 1264 1241 1264 0.95 15 23 0.0025 0.2 12.8 0.1 2 23 1270 1292 1269 1292 0.95 16 23 0.0087 0.7 11.1 0.2 1 21 1336 1356 1336 1357 0.95 17 23 0.0011 0.086 14.0 0.6 1 23 1367 1389 1367 1389 0.93 18 23 8.1e-05 0.0064 17.5 0.4 2 23 1479 1501 1479 1501 0.93 19 23 1.6e-07 1.3e-05 26.0 1.1 3 23 1508 1528 1507 1528 0.98 20 23 0.18 14 7.0 0.2 1 23 1547 1570 1547 1570 0.93 21 23 0.035 2.8 9.2 0.0 1 23 1597 1619 1597 1619 0.98 22 23 0.024 1.9 9.7 0.6 1 23 1625 1648 1625 1648 0.95 23 23 4.2e-05 0.0034 18.4 0.3 1 23 1656 1679 1656 1679 0.97
Sequence Information
- Coding Sequence
- atgaaTGTGAATTATGATAGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCTATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTGGCATCTAAAATAAGGGACTGTGTTTCCGTTCAGATAAGCGAAAATGACGACCTGCCTACCAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCACATATTTAAGACTGTGTGTGAAAGGACACAAAACAAGCTACAGTCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGATTAAAGTGAAAAATGAACTTTTGTCAGATGAGGCCTATGATGATGGAGTGGTTATTGATGGATTATACCCTGATAGTGAGAATGGTGGCACTTTGAACAAGTTGCAACCCGAAGGCCCGCCAATCTTAGCATCATTGGGACTCACACCGAGGAGTGATAAGACTCATGTAGATCCCCGAATGGACTGGCATCGGGTTCATGCAATAATGGGGATGGTCCAAGATGATGATGTCATTGATGCACTGCAGTCCGCAGAGGAGTGCGATGTTGTCCATCAATCAGACCATAACTCTGACTCAGATGCAGAGTTGAATGATGAAATTGAGGACGATTTTATTGACTGTAAAAATGGCTTCCTGAGAAAAGATAGACAATTTATATCAAAGTACCCGAAATTATCATCATCAGCCAATCATGCCAAATTGAAAGAGGGTGCAGACAGTGATAAAGATGACGAGGAAGAAGAAGAAGACGACGAAGACGGGAATGAATCCCAAAATTTTTCACCCATAAACATTTCTAACAGATCCGGGATTCCCAATATGCCTGAAGTTTCCATAACTGTCATGCGTCCTACAGGTGAAACTTTACACTCTCGTCAAGGTATCCAACAACTTGCTTCTAAAGATTGCCTCGTATGCGGTCGATCCTACCAATACTCCCATAATGCAAGACGTCATGAACTCACCTCACACGGCTTCGatagatatacaaataaaatcacaCACAAAAAAACTCCTTCACACATGCAACCAAAACTTCGACCTAATCCATTCAATCCTAAAGCTCGGCTTATGCCTAATCCTATCAGCCATAAAATGCAACTTATCCCGAAGGGTATTTCAACAAAAATCATAACCCCAAAAACGAGTGGCCCACCTAAACCGATCCCTATCAAAACTATAAAACCGCCACAGCATATTTTGCCATATCCATTGCGTATCAAAGCACTAAAggatttacaaataaaaaagaaagaaccTCAAATTTTGAAAACACTCCTGACAACTAAGCCTGAAGTTTTAATATCTGAACCAGAAATAATTAATTCGGGTCCTGAAAGTCCGGAAACATTGATATCGGAGCCCGAAATAGCATCGTTTCAAGTAGAAGCTATTCTGTCGGAACCAGATACTTTTGTGAACCAACATGATGATGAAGGTGATGGAGAATCGCatcaatacaaaacaaataatcatGGCCAAAACTATGATACTGTAGAAATGGACACTGATAATGAAATAGAAATCGCTCGTCAGCAGGAAAACGAAGGTGATGATGGTCAAGTGGGAAGTAAAGATGATACTGAAAATGATAAGCATATAGTGGAAAGCGACGAAAATTATAAGCAAGTGCCAACAGAAGATGGTGAAATGCATACTGATGGCGATGTTGATGTCAGTAAAATTAACCACCAAATCAAAGAAGAAAAGGACCATGAGGAACAAAATCATGATGACAATTatgaagatgatgatgatgagttaCCACCAAGCTTGGCTCCTGTTGTAGAAATTAATGAAGATATGCAGGCAAATTCTTACAATAGCGAGATGAATGAAGAGGAAGAGGAAGAAGACTTAGAATCAGCAGATGCTAATGATACAATAGACGGTGAAGAAAATGCGAAAGATCTAGATACCGATAAGATATATGTTACAAAAACTCAACGAGACTTTATAATCAAGTATCGTGATATAATTGAGCAGATTAATACCAAGCGATGTCTTTGCTGTAAAAGGGAACATCCCCGCAGAAAAGCGGTCATTCAGCATTTACAAAAGAATGGCCATAAAGTACCCAAACATACTTGCTACAATTGCGTTGTCACATTTACTCATATTGGAGCTTTACTCAGTCACATGAGGTCAAACACTTGCACTGATTTGTGGaaagtaatttataatgaaaatggcATTACGGAAGATCTTGTTTTAGAAGATGAAGAACCAAAAGATCCTAAAATTCAGCCCAAAGATATTTTTAACGCTAGATCATATGCATGCAAGTTATGTCCAGCTAAATTTCAGTTGAAACAGTTTATAATGAAACATGTGTTGGATGTTCACGAAGATGGCCAATCTAAAGTAACGTTGGCATGTGTCCATTGTGGATCGAGATTCAAAGATAAAGGTTTGTGGAAGAAACATATACGAAACGGAGAATGCACAGTTTATATTTCGTGTGACCTATGTTCAGAGAAGTTTGTTAACATGCAAGATTTTAGCGATCACGCTCTGGCTGTTCATGCTGGCAGCTGCGATCTATCTGATAGTCAGAGTAAATGTGTGGACGGAAGACCAACGGACTGTCCTATATGCGGCAAGAAAAATAGCAGCTATCCGAATTTGGTAAAACACTTGAAGATTATTCATAATGAGGAAAAGCCTCATTACTGCCAGCACTGTGACTCCAAATACGAACAAGCTGCCGAACTGAACAAACACATTTATATGGAGCATTCAGACAGATCTTTAGGCGTCCAGATTTCAACGGAGCCCGATATGTCGCTCGTCAAAGAAGAAGCGGAAGAATATCATTATTCTTGTACGGAATGCAATGCCATTTTCGAAACCGTGGATGCATGGACCGATCATCAAGTAGCTGAACATAATCAGGTTGCTCATCACTGTGACCAATGCGAAAAGAAATTTTTGCGGCCATCTGAGTTGGCTGAgcataaaaatacacatttgcGGGTGAAATTTTACCCTTGTAATGTCTGTTCAAATTCTTACAGCACCCCTCAGAAGCTTTCTGAACACGTTCAACAAGCTCACCCTGGGTCCGGTGGATACAGTTCATTGGATGCAGAATTCTTTTGTGACATATGTATCAGATCATTCAAAAGCCGCCAGGCGTATTCTAATCATATGCGTATACATTCTAAAGTACCTACTACTAATAGGAAGCCTGGAGATCCTAAAGGGTTTTCACCACAAATTATTGGAAAACCTATTCGACACTTTTCCATGGTTCAACCAAGCTTTTTGTCATTTAAGCCAAATTGTAATGTTCCTAATGCTCCTTACTCATGTGATATTTGTGGCAAAGGGTTTAtgcataagaaaaatatatggaaACATAAGAAAGTGCTGCACGCTGATCTGATTAATGACAGAAACGACAGTGAAGAGAATACTATGCAAGCATCTACCGAAGAAGATGACTATAACGTAGATGAAAATGGCTCCATTTTGTCAACGCCCCAATTCAACAGTTTCAACTTTACAAATACGACTAATAATATGCAGCAGCAGCAGCAACAGCAGCCCACACAAGACCCGATGCCGTTCTCTTGTGAATTATGTTACAAACGATTCCCTCTTAGAACTAGTTTGTGGAAACACAAACGCGCTAAGCATGGAATAATTAACCCTGGTTCTACTAAATCGTCTGACCAAGTAACACCTAGCGAGTCGACTGGTCGGTCGAATTGTACTATATGCGAGATAAGTTTCTCCGACAAGAGGTCGTATTATCGTCACAGGAAAAATGTTCATAAATCAACTGTACAGATGTGTAAGATCTGCGGTAAACCGCTAAGTTCCACGGGTGAACTTTATGAGCATTTGAGGGCCGCTCACGCACAAGAATTGCTTGGTTATAATGCAAGCCAAGGTACTAGCAAAGCGCAAGATATGAGTCAAGAAATGGACCCAGATTACGAACAGGATCAGGATACCATAGATCCTAATGCTGACTATCAAGCACGATACCCATGCGATACTTGTGGAAAGCAATTTGTTGGACTCCTCGCATTGCAAAATCATCAATGCATTAATCAGATGCAACCGCAGCCGCAAACATTTGACTGTGAGATTTGCCATAAAAGCTACACATCTATTGCTGCTCTTAAGAGCCACCGCGGTTGGCATTTGCGCTCACCTGACGGTAAAGCTGCTGCAAATAATTCCGGCCTGTGGATGCCACAGCGCAAAGTTACAAGTAAAGTAAGTAAGCATGAAGTAGTTGATCCCTCACAATTGGCGAAAGTTACGCACACTCCCCCAAGCGTGGTAGCGAAGCGGAGGTTACCTCCAGAAGTAGAAGTTACCGTGGTCAATCCGAACAAAAAATTGCGATCGGATGATTCCGTTGAAATTGATCAACAGAACAATTCATCTTCAGGAATCGAAGACAGGTATTGTTCTATATGTGATAAGGAATTTACGAAACGGGCGGCATTCCAACGCCATATGGATGAGGTCCATCAACCAAATTCAGTGTTCTGTCCTGTTTGCGACAAAAGTTTTACTCGGAAATCGACGTTGATTGTTCACATGAAAAAGCATTACGATGCCGGAGAGGGTAGTTCTACAGGTACAGCTCAGATGGATGACGATGCTCACGTATGTGACGTCTGTGAATCACAGTTCGAAACTGTTACCGAGTTGAACGCTCACCGTATTGAGCAACACGGTGAAGGGGATGGCGATGGAGAAGAAACGGGCGAGTCAGAGGAGGAGGCAGTTGATGTAGAGCAACCTCCAGGCGAATTCACTTGTAACCAATGTGGCGATGGAGTGGCGACACCTCGTGATTTAATTGCGCACCGCACCATGCACTCTACACCGACTAAGTTCTTCTGCAACATCTGCAAAGTTTACTTTGCAAGAGCTTTGGATCTCTCGTCCCACACCAGGGCGAGACACTCAGACAACGACAAGGTTTCCTACCCATGTGCCATGTGCGACCGCTCCTATATGAATAAGAAGAGTTTGCAGCGTCACATTGAAATGGCACACTGA
- Protein Sequence
- MNVNYDSVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIRDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKTVCERTQNKLQSLINKDGSQLEEIKVKNELLSDEAYDDGVVIDGLYPDSENGGTLNKLQPEGPPILASLGLTPRSDKTHVDPRMDWHRVHAIMGMVQDDDVIDALQSAEECDVVHQSDHNSDSDAELNDEIEDDFIDCKNGFLRKDRQFISKYPKLSSSANHAKLKEGADSDKDDEEEEEDDEDGNESQNFSPINISNRSGIPNMPEVSITVMRPTGETLHSRQGIQQLASKDCLVCGRSYQYSHNARRHELTSHGFDRYTNKITHKKTPSHMQPKLRPNPFNPKARLMPNPISHKMQLIPKGISTKIITPKTSGPPKPIPIKTIKPPQHILPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLISEPEIINSGPESPETLISEPEIASFQVEAILSEPDTFVNQHDDEGDGESHQYKTNNHGQNYDTVEMDTDNEIEIARQQENEGDDGQVGSKDDTENDKHIVESDENYKQVPTEDGEMHTDGDVDVSKINHQIKEEKDHEEQNHDDNYEDDDDELPPSLAPVVEINEDMQANSYNSEMNEEEEEEDLESADANDTIDGEENAKDLDTDKIYVTKTQRDFIIKYRDIIEQINTKRCLCCKREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKVIYNENGITEDLVLEDEEPKDPKIQPKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSKVTLACVHCGSRFKDKGLWKKHIRNGECTVYISCDLCSEKFVNMQDFSDHALAVHAGSCDLSDSQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKYEQAAELNKHIYMEHSDRSLGVQISTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNVCSNSYSTPQKLSEHVQQAHPGSGGYSSLDAEFFCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGDPKGFSPQIIGKPIRHFSMVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLINDRNDSEENTMQASTEEDDYNVDENGSILSTPQFNSFNFTNTTNNMQQQQQQQPTQDPMPFSCELCYKRFPLRTSLWKHKRAKHGIINPGSTKSSDQVTPSESTGRSNCTICEISFSDKRSYYRHRKNVHKSTVQMCKICGKPLSSTGELYEHLRAAHAQELLGYNASQGTSKAQDMSQEMDPDYEQDQDTIDPNADYQARYPCDTCGKQFVGLLALQNHQCINQMQPQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQRKVTSKVSKHEVVDPSQLAKVTHTPPSVVAKRRLPPEVEVTVVNPNKKLRSDDSVEIDQQNNSSSGIEDRYCSICDKEFTKRAAFQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDAGEGSSTGTAQMDDDAHVCDVCESQFETVTELNAHRIEQHGEGDGDGEETGESEEEAVDVEQPPGEFTCNQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNDKVSYPCAMCDRSYMNKKSLQRHIEMAH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01359955;
- 90% Identity
- iTF_01359955;
- 80% Identity
- -