Csem016548.1
Basic Information
- Insect
- Cecidostiba semifascia
- Gene Symbol
- NFXL1
- Assembly
- GCA_900474235.1
- Location
- UCQR01053528.1:2949-3934[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.2 1.4e+04 -3.3 1.9 15 19 126 130 126 130 0.86 2 5 0.058 3.8e+02 1.8 0.1 4 10 161 167 160 168 0.95 3 5 6.1e-09 4e-05 24.1 16.7 1 19 175 192 175 192 0.99 4 5 3.8 2.5e+04 -4.0 2.5 17 19 206 208 201 211 0.57 5 5 7.5e-07 0.0049 17.4 14.5 3 19 230 246 227 246 0.93
Sequence Information
- Coding Sequence
- ATGAGGAAATTTAGAAGAGCTCAGGCACAAAATCAAGCTTCTATTGAAAAACATTTGGAGGCACAGAAATCTAGGAGTGTGGAATCTTCTAGTAGTGAGGATGAAAATGAACAAGTGTTGGAAACAGCTGTCGAAAAAGTTTTATCCAACTATCAATCTGAAGGTGGTGATGTTAAGAAAACATTGTCGTATTTAACTGAAACTTTTCAGTCTGGAGGCGCTGTTTGCTTGATATGTATATCATCTGTTAAAAAAACAGATGCGaTATGGAGCTGTGCAGaatgttttacttttatgCATTTACCTTGTATTCAACATTGGGTCAGGGATAGTTTGAGTTCTAAACATGAGAAAGGAATTGTACCCTTATGGGGATGCCCTAAATGCAGAAAAGAATATAGAGAAGATCAAATACCAAAACGATATGTGTGCTTTTGTGGCAAAACTGAAGATCCACCATATCAACCATGGTCAATTCCTCATTCTTGTGCAGACATATGTGGAAAGTTTCTTCTACCAAAATGTGGACACAAATGCATGCTTCTGTGTCACCCTGGTCCATGTCCTCCGTGTCCAAAAATGGTGTCAGTTACCTGTTTCTGTGGAAAACAATCACCTTGCCCACGGAGATGTAATGCAAAGGAGTGGTCTTGTGGAgtgatttgcaataaaaaatacaaaacatgTGAACATGCATGTATTGAAAATTGTCATCCTGGACCTTGTCCACCTTGTACAGAAAAAGTGCTCACTGCCTGCAATTGCAAGAATAAGTCTGAATTA
- Protein Sequence
- MRKFRRAQAQNQASIEKHLEAQKSRSVESSSSEDENEQVLETAVEKVLSNYQSEGGDVKKTLSYLTETFQSGGAVCLICISSVKKTDAIWSCAECFTFMHLPCIQHWVRDSLSSKHEKGIVPLWGCPKCRKEYREDQIPKRYVCFCGKTEDPPYQPWSIPHSCADICGKFLLPKCGHKCMLLCHPGPCPPCPKMVSVTCFCGKQSPCPRRCNAKEWSCGVICNKKYKTCEHACIENCHPGPCPPCTEKVLTACNCKNKSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00287747;
- 90% Identity
- iTF_00287747;
- 80% Identity
- iTF_00287747;